RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 GPR22Q99680 433 aa6.85□□□□□ -1.31
MSH5-217ENST00000494458 RBBP8Q99708 897 aa6.85□□□□□ -1.31
MSH5-217ENST00000494458 APOL2Q9BQE5 337 aa6.85□□□□□ -1.31
MSH5-217ENST00000494458 FAM83CQ9BQN1 747 aa6.85□□□□□ -1.31
MSH5-217ENST00000494458 SPON2Q9BUD6 331 aa6.85□□□□□ -1.31
MSH5-217ENST00000494458 CPEB1Q9BZB8 566 aaKnown RBP6.85□□□□□ -1.31
MSH5-217ENST00000494458 CEP44Q9C0F1 390 aa6.85□□□□□ -1.31
MSH5-217ENST00000494458 LINC00597Q9H2U6 94 aa6.85□□□□□ -1.31
MSH5-217ENST00000494458 NKX2-4Q9H2Z4 354 aa6.85□□□□□ -1.31
MSH5-217ENST00000494458 INTS9Q9NV88 658 aaKnown RBP6.85□□□□□ -1.31
MSH5-217ENST00000494458 PIH1D1Q9NWS0 290 aaKnown RBP6.85□□□□□ -1.31
MSH5-217ENST00000494458 SAMD15Q9P1V8 674 aa6.85□□□□□ -1.31
MSH5-217ENST00000494458 MSRAQ9UJ68 235 aa6.85□□□□□ -1.31
MSH5-217ENST00000494458 SLC27A6Q9Y2P4 619 aa6.85□□□□□ -1.31
MSH5-217ENST00000494458 PLLPQ9Y342 182 aa6.85□□□□□ -1.31
MSH5-217ENST00000494458 ACTL7AQ9Y615 435 aa6.85□□□□□ -1.31
MSH5-217ENST00000494458 ATG2AQ2TAZ0 1938 aa6.85□□□□□ -1.31
MSH5-217ENST00000494458 MYO7AQ13402 2215 aa6.85□□□□□ -1.31
MSH5-217ENST00000494458 GBF1Q92538 1859 aa6.84□□□□□ -1.31
MSH5-217ENST00000494458 TTC24A2A3L6 582 aaPredicted RBP6.84□□□□□ -1.31
MSH5-217ENST00000494458 CBX4O00257 560 aa6.84□□□□□ -1.31
MSH5-217ENST00000494458 KLF11O14901 512 aa6.84□□□□□ -1.31
MSH5-217ENST00000494458 SOCS5O75159 536 aa6.84□□□□□ -1.31
MSH5-217ENST00000494458 GJB3O75712 270 aa6.84□□□□□ -1.31
MSH5-217ENST00000494458 AHSGP02765 367 aa6.84□□□□□ -1.31
MSH5-217ENST00000494458 CYBBP04839 570 aa6.84□□□□□ -1.31
MSH5-217ENST00000494458 GSTA1P08263 222 aa6.84□□□□□ -1.31
MSH5-217ENST00000494458 SRCP12931 536 aa6.84□□□□□ -1.31
MSH5-217ENST00000494458 HOXB8P17481 243 aaPredicted RBP6.84□□□□□ -1.31
MSH5-217ENST00000494458 KRT15P19012 456 aa6.84□□□□□ -1.31
MSH5-217ENST00000494458 TAC1P20366 129 aa6.84□□□□□ -1.31
MSH5-217ENST00000494458 DRD4P21917 467 aa6.84□□□□□ -1.31
MSH5-217ENST00000494458 CD9P21926 228 aa6.84□□□□□ -1.31
MSH5-217ENST00000494458 FCARP24071 287 aa6.84□□□□□ -1.31
MSH5-217ENST00000494458 CD70P32970 193 aa6.84□□□□□ -1.31
MSH5-217ENST00000494458 RPA3P35244 121 aaPredicted RBP6.84□□□□□ -1.31
MSH5-217ENST00000494458 SPRP35270 261 aaPredicted RBP6.84□□□□□ -1.31
MSH5-217ENST00000494458 MAPK8P45983 427 aa6.84□□□□□ -1.31
MSH5-217ENST00000494458 NRIP1P48552 1158 aa6.84□□□□□ -1.31
MSH5-217ENST00000494458 ZNF140P52738 457 aaPredicted RBP6.84□□□□□ -1.31
MSH5-217ENST00000494458 SULT2A1Q06520 285 aa6.84□□□□□ -1.31
MSH5-217ENST00000494458 FCHO2Q0JRZ9 810 aa6.84□□□□□ -1.31
MSH5-217ENST00000494458 TRAF2Q12933 501 aa6.84□□□□□ -1.31
MSH5-217ENST00000494458 ADAM15Q13444 863 aa6.84□□□□□ -1.31
MSH5-217ENST00000494458 CDH18Q13634 790 aa6.84□□□□□ -1.31
MSH5-217ENST00000494458 POU6F1Q14863 301 aa6.84□□□□□ -1.31
MSH5-217ENST00000494458 TAF1AQ15573 450 aaPredicted RBP6.84□□□□□ -1.31
MSH5-217ENST00000494458 ZKSCAN8Q15776 578 aaPredicted RBP6.84□□□□□ -1.31
MSH5-217ENST00000494458 CNGA3Q16281 694 aa6.84□□□□□ -1.31
MSH5-217ENST00000494458 EML3Q32P44 896 aa6.84□□□□□ -1.31
MSH5-217ENST00000494458 HSP90AA5PQ58FG0 334 aa6.84□□□□□ -1.31
MSH5-217ENST00000494458 PITRM1Q5JRX3 1037 aa6.84□□□□□ -1.31
MSH5-217ENST00000494458 DGKKQ5KSL6 1271 aa6.84□□□□□ -1.31
MSH5-217ENST00000494458 TMEM215Q68D42 235 aa6.84□□□□□ -1.31
MSH5-217ENST00000494458 CASC4Q6P4E1 433 aa6.84□□□□□ -1.31
MSH5-217ENST00000494458 SYCE2Q6PIF2 218 aa6.84□□□□□ -1.31
MSH5-217ENST00000494458 C6orf89Q6UWU4 347 aa6.84□□□□□ -1.31
MSH5-217ENST00000494458 CES3Q6UWW8 571 aa6.84□□□□□ -1.31
MSH5-217ENST00000494458 CDHR3Q6ZTQ4 885 aa6.84□□□□□ -1.31
MSH5-217ENST00000494458 SRLQ86TD4 932 aa6.84□□□□□ -1.31
MSH5-217ENST00000494458 ZC3HC1Q86WB0 502 aaKnown RBP6.84□□□□□ -1.31
MSH5-217ENST00000494458 CTAGE3PQ8IX95 158 aa6.84□□□□□ -1.31
MSH5-217ENST00000494458 NPAS3Q8IXF0 933 aa6.84□□□□□ -1.31
MSH5-217ENST00000494458 ETFBKMTQ8IXQ9 262 aa6.84□□□□□ -1.31
MSH5-217ENST00000494458 TMEM151AQ8N4L1 468 aa6.84□□□□□ -1.31
MSH5-217ENST00000494458 TTC30BQ8N4P2 665 aa6.84□□□□□ -1.31
MSH5-217ENST00000494458 KDM1BQ8NB78 822 aa6.84□□□□□ -1.31
MSH5-217ENST00000494458 PPHLN1Q8NEY8 458 aaKnown RBP6.84□□□□□ -1.31
MSH5-217ENST00000494458 OR6Y1Q8NGX8 325 aa6.84□□□□□ -1.31
MSH5-217ENST00000494458 DDI1Q8WTU0 396 aa6.84□□□□□ -1.31
MSH5-217ENST00000494458 FRS2Q8WU20 508 aa6.84□□□□□ -1.31
MSH5-217ENST00000494458 STYXQ8WUJ0 223 aa6.84□□□□□ -1.31
MSH5-217ENST00000494458 OSCP1Q8WVF1 389 aa6.84□□□□□ -1.31
MSH5-217ENST00000494458 PIH1D2Q8WWB5 315 aa6.84□□□□□ -1.31
MSH5-217ENST00000494458 SMG7Q92540 1137 aaKnown RBP6.84□□□□□ -1.31
MSH5-217ENST00000494458 ZNF669Q96BR6 464 aaPredicted RBP6.84□□□□□ -1.31
MSH5-217ENST00000494458 CHMP6Q96FZ7 201 aa6.84□□□□□ -1.31
MSH5-217ENST00000494458 APOPT1Q96IL0 206 aa6.84□□□□□ -1.31
MSH5-217ENST00000494458 CCT8L2Q96SF2 557 aa6.84□□□□□ -1.31
MSH5-217ENST00000494458 AGAP2Q99490 1192 aa6.84□□□□□ -1.31
MSH5-217ENST00000494458 CINPQ9BW66 212 aaPredicted RBP6.84□□□□□ -1.31
MSH5-217ENST00000494458 FSD1LQ9BXM9 530 aa6.84□□□□□ -1.31
MSH5-217ENST00000494458 SMG9Q9H0W8 520 aaKnown RBP6.84□□□□□ -1.31
MSH5-217ENST00000494458 MUC3BQ9H195 1237 aa6.84□□□□□ -1.31
MSH5-217ENST00000494458 S1PR5Q9H228 398 aa6.84□□□□□ -1.31
MSH5-217ENST00000494458 MFSD1Q9H3U5 465 aa6.84□□□□□ -1.31
MSH5-217ENST00000494458 RHOJQ9H4E5 214 aa6.84□□□□□ -1.31
MSH5-217ENST00000494458 MAGEE1Q9HCI5 957 aa6.84□□□□□ -1.31
MSH5-217ENST00000494458 NLE1Q9NVX2 485 aaPredicted RBP6.84□□□□□ -1.31
MSH5-217ENST00000494458 SLC2A6Q9UGQ3 507 aa6.84□□□□□ -1.31
MSH5-217ENST00000494458 GRID1Q9ULK0 1009 aa6.84□□□□□ -1.31
MSH5-217ENST00000494458 MRPS23Q9Y3D9 190 aaKnown RBP6.84□□□□□ -1.31
MSH5-217ENST00000494458 IKBKGQ9Y6K9 419 aa6.84□□□□□ -1.31
MSH5-217ENST00000494458 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.83□□□□□ -1.32
MSH5-217ENST00000494458 AGAP14A8MT82 685 aa6.83□□□□□ -1.32
MSH5-217ENST00000494458 K7ERQ8 282 aa6.83□□□□□ -1.32
MSH5-217ENST00000494458 BIRC5O15392 142 aa6.83□□□□□ -1.32
MSH5-217ENST00000494458 SMAD6O43541 496 aaKnown RBP6.83□□□□□ -1.32
MSH5-217ENST00000494458 TIMM44O43615 452 aa6.83□□□□□ -1.32
MSH5-217ENST00000494458 VAPBO95292 243 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms