RNA–Protein interactions for RNA: ENST00000493356.5

PFDN4-205, Transcript of prefoldin subunit 4, humanhuman

TSL 3

Gene PFDN4, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-205ENST00000493356 TMX2-CTNND1H3BSU7 103 aa21.7■■□□□ 1.06
PFDN4-205ENST00000493356 RAMP2O60895 175 aa21.7■■□□□ 1.06
PFDN4-205ENST00000493356 GADD45BO75293 160 aaPredicted RBP21.7■■□□□ 1.06
PFDN4-205ENST00000493356 TMCC1O94876 653 aa21.7■■□□□ 1.06
PFDN4-205ENST00000493356 RPLP0P05388 317 aaKnown RBP21.7■■□□□ 1.06
PFDN4-205ENST00000493356 CTSEP14091 401 aa21.7■■□□□ 1.06
PFDN4-205ENST00000493356 TIMP2P16035 220 aa21.7■■□□□ 1.06
PFDN4-205ENST00000493356 CSRP3P50461 194 aa21.7■■□□□ 1.06
PFDN4-205ENST00000493356 PEX5P50542 639 aa21.7■■□□□ 1.06
PFDN4-205ENST00000493356 SRSF6Q13247 344 aaKnown RBP21.7■■□□□ 1.06
PFDN4-205ENST00000493356 MAN2A1Q16706 1144 aa21.7■■□□□ 1.06
PFDN4-205ENST00000493356 USP53Q70EK8 1073 aa21.7■■□□□ 1.06
PFDN4-205ENST00000493356 SGF29Q96ES7 293 aa21.7■■□□□ 1.06
PFDN4-205ENST00000493356 GDAP1L1Q96MZ0 367 aa21.7■■□□□ 1.06
PFDN4-205ENST00000493356 CPEB1Q9BZB8 566 aaKnown RBP21.7■■□□□ 1.06
PFDN4-205ENST00000493356 FAM117AQ9C073 453 aa21.7■■□□□ 1.06
PFDN4-205ENST00000493356 TTYH3Q9C0H2 523 aa21.7■■□□□ 1.06
PFDN4-205ENST00000493356 HEMK1Q9Y5R4 338 aaPredicted RBP21.7■■□□□ 1.06
PFDN4-205ENST00000493356 FHOD1Q9Y613 1164 aa21.7■■□□□ 1.06
PFDN4-205ENST00000493356 KDELR3O43731 214 aa21.69■■□□□ 1.06
PFDN4-205ENST00000493356 LRIG2O94898 1065 aa21.69■■□□□ 1.06
PFDN4-205ENST00000493356 CCKBRP32239 447 aa21.69■■□□□ 1.06
PFDN4-205ENST00000493356 NOMO3P69849 1222 aa21.69■■□□□ 1.06
PFDN4-205ENST00000493356 RAD51Q06609 339 aa21.69■■□□□ 1.06
PFDN4-205ENST00000493356 CDO1Q16878 200 aa21.69■■□□□ 1.06
PFDN4-205ENST00000493356 C15orf59Q2T9L4 293 aaPredicted RBP21.69■■□□□ 1.06
PFDN4-205ENST00000493356 XKR5Q6UX68 686 aa21.69■■□□□ 1.06
PFDN4-205ENST00000493356 NOP9Q86U38 636 aaKnown RBP21.69■■□□□ 1.06
PFDN4-205ENST00000493356 CPA5Q8WXQ8 436 aa21.69■■□□□ 1.06
PFDN4-205ENST00000493356 MAGEB5Q9BZ81 275 aa21.69■■□□□ 1.06
PFDN4-205ENST00000493356 DKK3Q9UBP4 350 aa21.69■■□□□ 1.06
PFDN4-205ENST00000493356 GPR34Q9UPC5 381 aa21.69■■□□□ 1.06
PFDN4-205ENST00000493356 COQ6Q9Y2Z9 468 aa21.69■■□□□ 1.06
PFDN4-205ENST00000493356 ZSCAN5CA6NGD5 496 aaPredicted RBP21.68■■□□□ 1.06
PFDN4-205ENST00000493356 TMEM110-MUSTN1A8MSY1 372 aa21.68■■□□□ 1.06
PFDN4-205ENST00000493356 BUB1O43683 1085 aa21.68■■□□□ 1.06
PFDN4-205ENST00000493356 RASGRP1O95267 797 aa21.68■■□□□ 1.06
PFDN4-205ENST00000493356 IGSF6O95976 241 aa21.68■■□□□ 1.06
PFDN4-205ENST00000493356 ITGB2P05107 769 aa21.68■■□□□ 1.06
PFDN4-205ENST00000493356 LRRC14Q15048 493 aa21.68■■□□□ 1.06
PFDN4-205ENST00000493356 WSCD2Q2TBF2 565 aa21.68■■□□□ 1.06
PFDN4-205ENST00000493356 TMEM52BQ4KMG9 183 aa21.68■■□□□ 1.06
PFDN4-205ENST00000493356 NAA35Q5VZE5 725 aa21.68■■□□□ 1.06
PFDN4-205ENST00000493356 ENPP7Q6UWV6 458 aa21.68■■□□□ 1.06
PFDN4-205ENST00000493356 NYAP1Q6ZVC0 841 aa21.68■■□□□ 1.06
PFDN4-205ENST00000493356 GKN2Q86XP6 184 aa21.68■■□□□ 1.06
PFDN4-205ENST00000493356 NETO2Q8NC67 525 aa21.68■■□□□ 1.06
PFDN4-205ENST00000493356 EXTL1Q92935 676 aa21.68■■□□□ 1.06
PFDN4-205ENST00000493356 TBC1D31Q96DN5 1066 aa21.68■■□□□ 1.06
PFDN4-205ENST00000493356 TMEM74Q96NL1 305 aa21.68■■□□□ 1.06
PFDN4-205ENST00000493356 TRIM4Q9C037 500 aa21.68■■□□□ 1.06
PFDN4-205ENST00000493356 NDST4Q9H3R1 872 aa21.68■■□□□ 1.06
PFDN4-205ENST00000493356 LRRN3Q9H3W5 708 aa21.68■■□□□ 1.06
PFDN4-205ENST00000493356 STARD5Q9NSY2 213 aa21.68■■□□□ 1.06
PFDN4-205ENST00000493356 KIAA1468Q9P260 1216 aa21.68■■□□□ 1.06
PFDN4-205ENST00000493356 PISDQ9UG56 409 aa21.68■■□□□ 1.06
PFDN4-205ENST00000493356 IL17BQ9UHF5 180 aa21.68■■□□□ 1.06
PFDN4-205ENST00000493356 MFHAS1Q9Y4C4 1052 aa21.68■■□□□ 1.06
PFDN4-205ENST00000493356 NVLO15381 856 aaKnown RBP21.67■■□□□ 1.06
PFDN4-205ENST00000493356 MMEP08473 750 aa21.67■■□□□ 1.06
PFDN4-205ENST00000493356 JMJD7P0C870 316 aa21.67■■□□□ 1.06
PFDN4-205ENST00000493356 LIPCP11150 499 aa21.67■■□□□ 1.06
PFDN4-205ENST00000493356 HTR1BP28222 390 aa21.67■■□□□ 1.06
PFDN4-205ENST00000493356 NFATC4Q14934 902 aa21.67■■□□□ 1.06
PFDN4-205ENST00000493356 CCDC14Q49A88 953 aa21.67■■□□□ 1.06
PFDN4-205ENST00000493356 RD3Q7Z3Z2 195 aa21.67■■□□□ 1.06
PFDN4-205ENST00000493356 OR6C4Q8NGE1 309 aa21.67■■□□□ 1.06
PFDN4-205ENST00000493356 RXFP2Q8WXD0 754 aa21.67■■□□□ 1.06
PFDN4-205ENST00000493356 NOL6Q9H6R4 1146 aaKnown RBP21.67■■□□□ 1.06
PFDN4-205ENST00000493356 LOXL2Q9Y4K0 774 aa21.67■■□□□ 1.06
PFDN4-205ENST00000493356 COL12A1Q99715 3063 aa21.66■■□□□ 1.06
PFDN4-205ENST00000493356 PLEKP08567 350 aaPredicted RBP21.66■■□□□ 1.06
PFDN4-205ENST00000493356 SDC4P31431 198 aa21.66■■□□□ 1.06
PFDN4-205ENST00000493356 SUOXP51687 545 aa21.66■■□□□ 1.06
PFDN4-205ENST00000493356 SRP54P61011 504 aaKnown RBP21.66■■□□□ 1.06
PFDN4-205ENST00000493356 RHOAP61586 193 aa21.66■■□□□ 1.06
PFDN4-205ENST00000493356 INPP5AQ14642 412 aa21.66■■□□□ 1.06
PFDN4-205ENST00000493356 VWA3BQ502W6 1294 aa21.66■■□□□ 1.06
PFDN4-205ENST00000493356 MIIPQ5JXC2 388 aa21.66■■□□□ 1.06
PFDN4-205ENST00000493356 KLHDC7AQ5VTJ3 777 aa21.66■■□□□ 1.06
PFDN4-205ENST00000493356 ZNF354CQ86Y25 554 aa21.66■■□□□ 1.06
PFDN4-205ENST00000493356 CCDC185Q8N715 623 aa21.66■■□□□ 1.06
PFDN4-205ENST00000493356 GPR156Q8NFN8 814 aa21.66■■□□□ 1.06
PFDN4-205ENST00000493356 EPS8L1Q8TE68 723 aa21.66■■□□□ 1.06
PFDN4-205ENST00000493356 CASKIN2Q8WXE0 1202 aa21.66■■□□□ 1.06
PFDN4-205ENST00000493356 ARHGAP9Q9BRR9 750 aa21.66■■□□□ 1.06
PFDN4-205ENST00000493356 APOOQ9BUR5 198 aa21.66■■□□□ 1.06
PFDN4-205ENST00000493356 NAA15Q9BXJ9 866 aaKnown RBP21.66■■□□□ 1.06
PFDN4-205ENST00000493356 KLC2Q9H0B6 622 aa21.66■■□□□ 1.06
PFDN4-205ENST00000493356 KLQ9UEF7 1012 aa21.66■■□□□ 1.06
PFDN4-205ENST00000493356 OR1A2Q9Y585 309 aa21.66■■□□□ 1.06
PFDN4-205ENST00000493356 ANKRD36A6QL64 1941 aa21.66■■□□□ 1.06
PFDN4-205ENST00000493356 TERTO14746 1132 aaKnown RBP21.65■■□□□ 1.06
PFDN4-205ENST00000493356 INSIG1O15503 277 aa21.65■■□□□ 1.06
PFDN4-205ENST00000493356 ITGB6P18564 788 aa21.65■■□□□ 1.06
PFDN4-205ENST00000493356 ITIH1P19827 911 aa21.65■■□□□ 1.06
PFDN4-205ENST00000493356 XPAP23025 273 aaPredicted RBP21.65■■□□□ 1.06
PFDN4-205ENST00000493356 NFKB2Q00653 900 aa21.65■■□□□ 1.06
PFDN4-205ENST00000493356 ELP6Q0PNE2 266 aa21.65■■□□□ 1.06
PFDN4-205ENST00000493356 INO80DQ53TQ3 878 aaPredicted RBP21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms