RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 PPM1HQ9ULR3 514 aa17.36■□□□□ 0.37
LIME1-208ENST00000493265 PCDHGA2Q9Y5H1 932 aa17.36■□□□□ 0.37
LIME1-208ENST00000493265 RAI2Q9Y5P3 530 aa17.36■□□□□ 0.37
LIME1-208ENST00000493265 C1QTNF3-AMACRE9PGA6 284 aa17.35■□□□□ 0.37
LIME1-208ENST00000493265 ALOX15BO15296 676 aa17.35■□□□□ 0.37
LIME1-208ENST00000493265 MID1O15344 667 aa17.35■□□□□ 0.37
LIME1-208ENST00000493265 GABRG2P18507 467 aa17.35■□□□□ 0.37
LIME1-208ENST00000493265 NDUFV2P19404 249 aa17.35■□□□□ 0.37
LIME1-208ENST00000493265 SLC8A1P32418 973 aa17.35■□□□□ 0.37
LIME1-208ENST00000493265 GEMP55040 296 aa17.35■□□□□ 0.37
LIME1-208ENST00000493265 PTK6Q13882 451 aa17.35■□□□□ 0.37
LIME1-208ENST00000493265 CST6Q15828 149 aa17.35■□□□□ 0.37
LIME1-208ENST00000493265 RALGPS1Q5JS13 557 aa17.35■□□□□ 0.37
LIME1-208ENST00000493265 MAATS1Q7Z4T9 603 aa17.35■□□□□ 0.37
LIME1-208ENST00000493265 TMIEQ8NEW7 156 aa17.35■□□□□ 0.37
LIME1-208ENST00000493265 PRCCQ92733 491 aaPredicted RBP17.35■□□□□ 0.37
LIME1-208ENST00000493265 SLCO2A1Q92959 643 aa17.35■□□□□ 0.37
LIME1-208ENST00000493265 SIPA1Q96FS4 1042 aa17.35■□□□□ 0.37
LIME1-208ENST00000493265 IFT43Q96FT9 208 aa17.35■□□□□ 0.37
LIME1-208ENST00000493265 TUBGCP5Q96RT8 1024 aa17.35■□□□□ 0.37
LIME1-208ENST00000493265 LRRC1Q9BTT6 524 aa17.35■□□□□ 0.37
LIME1-208ENST00000493265 CPEB1Q9BZB8 566 aaKnown RBP17.35■□□□□ 0.37
LIME1-208ENST00000493265 SUV39H2Q9H5I1 410 aa17.35■□□□□ 0.37
LIME1-208ENST00000493265 CD248Q9HCU0 757 aa17.35■□□□□ 0.37
LIME1-208ENST00000493265 SMG5Q9UPR3 1016 aaKnown RBP17.35■□□□□ 0.37
LIME1-208ENST00000493265 CHKBQ9Y259 395 aa17.35■□□□□ 0.37
LIME1-208ENST00000493265 NEU2Q9Y3R4 380 aa17.35■□□□□ 0.37
LIME1-208ENST00000493265 ANXA9O76027 345 aa17.34■□□□□ 0.37
LIME1-208ENST00000493265 ALDH1A2O94788 518 aa17.34■□□□□ 0.37
LIME1-208ENST00000493265 DNTTP04053 509 aa17.34■□□□□ 0.37
LIME1-208ENST00000493265 ACADMP11310 421 aa17.34■□□□□ 0.37
LIME1-208ENST00000493265 FDFT1P37268 417 aa17.34■□□□□ 0.37
LIME1-208ENST00000493265 TNNT3P45378 269 aaPredicted RBP17.34■□□□□ 0.37
LIME1-208ENST00000493265 CCR3P51677 355 aa17.34■□□□□ 0.37
LIME1-208ENST00000493265 WNT3AP56704 352 aa17.34■□□□□ 0.37
LIME1-208ENST00000493265 SLC7A5Q01650 507 aa17.34■□□□□ 0.37
LIME1-208ENST00000493265 OLIG2Q13516 323 aa17.34■□□□□ 0.37
LIME1-208ENST00000493265 CKAP5Q14008 2032 aa17.34■□□□□ 0.37
LIME1-208ENST00000493265 GRM3Q14832 879 aa17.34■□□□□ 0.37
LIME1-208ENST00000493265 LRRC73Q5JTD7 316 aa17.34■□□□□ 0.37
LIME1-208ENST00000493265 FAM46CQ5VWP2 391 aa17.34■□□□□ 0.37
LIME1-208ENST00000493265 C4orf22Q6V702 233 aa17.34■□□□□ 0.37
LIME1-208ENST00000493265 SYDE1Q6ZW31 735 aaPredicted RBP17.34■□□□□ 0.37
LIME1-208ENST00000493265 MMGT1Q8N4V1 131 aa17.34■□□□□ 0.37
LIME1-208ENST00000493265 SLC25A41Q8N5S1 370 aa17.34■□□□□ 0.37
LIME1-208ENST00000493265 PDCD7Q8N8D1 485 aaKnown RBP17.34■□□□□ 0.37
LIME1-208ENST00000493265 ARRDC3Q96B67 414 aa17.34■□□□□ 0.37
LIME1-208ENST00000493265 MRGPRX1Q96LB2 322 aa17.34■□□□□ 0.37
LIME1-208ENST00000493265 APOL2Q9BQE5 337 aa17.34■□□□□ 0.37
LIME1-208ENST00000493265 FICDQ9BVA6 458 aa17.34■□□□□ 0.37
LIME1-208ENST00000493265 FSD1LQ9BXM9 530 aa17.34■□□□□ 0.37
LIME1-208ENST00000493265 OSBPL1AQ9BXW6 950 aa17.34■□□□□ 0.37
LIME1-208ENST00000493265 DPH5Q9H2P9 285 aa17.34■□□□□ 0.37
LIME1-208ENST00000493265 FBRSQ9HAH7 460 aa17.34■□□□□ 0.37
LIME1-208ENST00000493265 DYRK4Q9NR20 520 aa17.34■□□□□ 0.37
LIME1-208ENST00000493265 ZSCAN32Q9NX65 697 aa17.34■□□□□ 0.37
LIME1-208ENST00000493265 AAR2Q9Y312 384 aaKnown RBP17.34■□□□□ 0.37
LIME1-208ENST00000493265 PCDHB9Q9Y5E1 797 aa17.34■□□□□ 0.37
LIME1-208ENST00000493265 GOLGA6CA6NDK9 693 aa17.33■□□□□ 0.36
LIME1-208ENST00000493265 GOLGA6BA6NDN3 693 aa17.33■□□□□ 0.36
LIME1-208ENST00000493265 FAM187AA6NFU0 413 aa17.33■□□□□ 0.36
LIME1-208ENST00000493265 USP12O75317 370 aa17.33■□□□□ 0.36
LIME1-208ENST00000493265 RNASEH2AO75792 299 aaKnown RBP17.33■□□□□ 0.36
LIME1-208ENST00000493265 APBB3O95704 486 aa17.33■□□□□ 0.36
LIME1-208ENST00000493265 ADH1BP00325 375 aa17.33■□□□□ 0.36
LIME1-208ENST00000493265 AGTP01019 485 aa17.33■□□□□ 0.36
LIME1-208ENST00000493265 PRKCGP05129 697 aa17.33■□□□□ 0.36
LIME1-208ENST00000493265 APRTP07741 180 aa17.33■□□□□ 0.36
LIME1-208ENST00000493265 PDHA1P08559 390 aa17.33■□□□□ 0.36
LIME1-208ENST00000493265 GOLGA6DP0CG33 693 aa17.33■□□□□ 0.36
LIME1-208ENST00000493265 CA4P22748 312 aa17.33■□□□□ 0.36
LIME1-208ENST00000493265 XPAP23025 273 aaPredicted RBP17.33■□□□□ 0.36
LIME1-208ENST00000493265 MPP3Q13368 585 aa17.33■□□□□ 0.36
LIME1-208ENST00000493265 GALNT3Q14435 633 aa17.33■□□□□ 0.36
LIME1-208ENST00000493265 ZNF805Q5CZA5 627 aa17.33■□□□□ 0.36
LIME1-208ENST00000493265 ARMC12Q5T9G4 340 aa17.33■□□□□ 0.36
LIME1-208ENST00000493265 KDELC1Q6UW63 502 aa17.33■□□□□ 0.36
LIME1-208ENST00000493265 FAM124AQ86V42 546 aa17.33■□□□□ 0.36
LIME1-208ENST00000493265 HDDC3Q8N4P3 179 aa17.33■□□□□ 0.36
LIME1-208ENST00000493265 ZBTB44Q8NCP5 570 aa17.33■□□□□ 0.36
LIME1-208ENST00000493265 LPCAT1Q8NF37 534 aa17.33■□□□□ 0.36
LIME1-208ENST00000493265 MDGA1Q8NFP4 955 aa17.33■□□□□ 0.36
LIME1-208ENST00000493265 VOPP1Q96AW1 172 aa17.33■□□□□ 0.36
LIME1-208ENST00000493265 LRRC45Q96CN5 670 aa17.33■□□□□ 0.36
LIME1-208ENST00000493265 PPP1R16AQ96I34 528 aa17.33■□□□□ 0.36
LIME1-208ENST00000493265 LRIG1Q96JA1 1093 aa17.33■□□□□ 0.36
LIME1-208ENST00000493265 ZNF641Q96N77 438 aaPredicted RBP17.33■□□□□ 0.36
LIME1-208ENST00000493265 OMDQ99983 421 aa17.33■□□□□ 0.36
LIME1-208ENST00000493265 TDRD1Q9BXT4 1180 aaKnown RBP17.33■□□□□ 0.36
LIME1-208ENST00000493265 TPSD1Q9BZJ3 242 aa17.33■□□□□ 0.36
LIME1-208ENST00000493265 GOLGA6AQ9NYA3 693 aa17.33■□□□□ 0.36
LIME1-208ENST00000493265 ANKRD36A6QL64 1941 aa17.32■□□□□ 0.36
LIME1-208ENST00000493265 A0A1W2PP55 124 aa17.32■□□□□ 0.36
LIME1-208ENST00000493265 C16orf96A6NNT2 1141 aa17.32■□□□□ 0.36
LIME1-208ENST00000493265 EFCAB8A8MWE9 144 aa17.32■□□□□ 0.36
LIME1-208ENST00000493265 SOCS5O75159 536 aa17.32■□□□□ 0.36
LIME1-208ENST00000493265 CPP00450 1065 aa17.32■□□□□ 0.36
LIME1-208ENST00000493265 EPHB1P54762 984 aa17.32■□□□□ 0.36
LIME1-208ENST00000493265 SEMG2Q02383 582 aa17.32■□□□□ 0.36
LIME1-208ENST00000493265 CDK18Q07002 472 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms