RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 TTC8Q8TAM2 541 aa14.22□□□□□ -0.13
PDZRN3-210ENST00000492909 TLCD1Q96CP7 247 aa14.22□□□□□ -0.13
PDZRN3-210ENST00000492909 CCT8L2Q96SF2 557 aa14.22□□□□□ -0.13
PDZRN3-210ENST00000492909 PHF7Q9BWX1 381 aaPredicted RBP14.22□□□□□ -0.13
PDZRN3-210ENST00000492909 TNKS2Q9H2K2 1166 aa14.22□□□□□ -0.13
PDZRN3-210ENST00000492909 BCCIPQ9P287 314 aaKnown RBP eCLIP14.22□□□□□ -0.13
PDZRN3-210ENST00000492909 SLCO3A1Q9UIG8 710 aa14.22□□□□□ -0.13
PDZRN3-210ENST00000492909 NOVA2Q9UNW9 492 aaKnown RBP14.22□□□□□ -0.13
PDZRN3-210ENST00000492909 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.21□□□□□ -0.13
PDZRN3-210ENST00000492909 C2CD4DB7Z1M9 353 aa14.21□□□□□ -0.13
PDZRN3-210ENST00000492909 ARNTLO00327 626 aa14.21□□□□□ -0.13
PDZRN3-210ENST00000492909 FAM107AO95990 144 aa14.21□□□□□ -0.13
PDZRN3-210ENST00000492909 FGF1P05230 155 aa14.21□□□□□ -0.13
PDZRN3-210ENST00000492909 POLBP06746 335 aa14.21□□□□□ -0.13
PDZRN3-210ENST00000492909 SRPRAP08240 638 aaKnown RBP14.21□□□□□ -0.13
PDZRN3-210ENST00000492909 DLDP09622 509 aaKnown RBP14.21□□□□□ -0.13
PDZRN3-210ENST00000492909 CA4P22748 312 aa14.21□□□□□ -0.13
PDZRN3-210ENST00000492909 KDSRQ06136 332 aa14.21□□□□□ -0.13
PDZRN3-210ENST00000492909 STAT4Q14765 748 aa14.21□□□□□ -0.13
PDZRN3-210ENST00000492909 EIF4HQ15056 248 aaKnown RBP14.21□□□□□ -0.13
PDZRN3-210ENST00000492909 DLG2Q15700 870 aa14.21□□□□□ -0.13
PDZRN3-210ENST00000492909 DGKKQ5KSL6 1271 aa14.21□□□□□ -0.13
PDZRN3-210ENST00000492909 UNC5AQ6ZN44 842 aa14.21□□□□□ -0.13
PDZRN3-210ENST00000492909 PCDH20Q8N6Y1 951 aaKnown RBP14.21□□□□□ -0.13
PDZRN3-210ENST00000492909 CYB5D2Q8WUJ1 264 aa14.21□□□□□ -0.13
PDZRN3-210ENST00000492909 NSMCE3Q96MG7 304 aa14.21□□□□□ -0.13
PDZRN3-210ENST00000492909 TDRD1Q9BXT4 1180 aaKnown RBP14.21□□□□□ -0.13
PDZRN3-210ENST00000492909 ELOVL2Q9NXB9 296 aa14.21□□□□□ -0.13
PDZRN3-210ENST00000492909 SLC8A2Q9UPR5 921 aa14.21□□□□□ -0.13
PDZRN3-210ENST00000492909 FAM50BQ9Y247 325 aa14.21□□□□□ -0.13
PDZRN3-210ENST00000492909 PCDHGC4Q9Y5F7 938 aa14.21□□□□□ -0.13
PDZRN3-210ENST00000492909 RAI2Q9Y5P3 530 aa14.21□□□□□ -0.13
PDZRN3-210ENST00000492909 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.2□□□□□ -0.14
PDZRN3-210ENST00000492909 TCRBV9S1A1TA0A576 114 aa14.2□□□□□ -0.14
PDZRN3-210ENST00000492909 PRRT4C9JH25 899 aa14.2□□□□□ -0.14
PDZRN3-210ENST00000492909 NDST3O95803 873 aa14.2□□□□□ -0.14
PDZRN3-210ENST00000492909 GSRP00390 522 aa14.2□□□□□ -0.14
PDZRN3-210ENST00000492909 ATXN1LP0C7T5 689 aaKnown RBP14.2□□□□□ -0.14
PDZRN3-210ENST00000492909 STX2P32856 288 aa14.2□□□□□ -0.14
PDZRN3-210ENST00000492909 OPRD1P41143 372 aa14.2□□□□□ -0.14
PDZRN3-210ENST00000492909 VASPP50552 380 aaPredicted RBP14.2□□□□□ -0.14
PDZRN3-210ENST00000492909 MESP2Q0VG99 397 aa14.2□□□□□ -0.14
PDZRN3-210ENST00000492909 POU6F1Q14863 301 aa14.2□□□□□ -0.14
PDZRN3-210ENST00000492909 TTC31Q49AM3 519 aaPredicted RBP14.2□□□□□ -0.14
PDZRN3-210ENST00000492909 PREPLQ4J6C6 727 aaPredicted RBP14.2□□□□□ -0.14
PDZRN3-210ENST00000492909 PCID2Q5JVF3 399 aa14.2□□□□□ -0.14
PDZRN3-210ENST00000492909 SIRPB2Q5JXA9 342 aa14.2□□□□□ -0.14
PDZRN3-210ENST00000492909 STEAP4Q687X5 459 aa14.2□□□□□ -0.14
PDZRN3-210ENST00000492909 CROCCP2Q86T23 111 aa14.2□□□□□ -0.14
PDZRN3-210ENST00000492909 PLCD3Q8N3E9 789 aa14.2□□□□□ -0.14
PDZRN3-210ENST00000492909 RYBPQ8N488 228 aaPredicted RBP14.2□□□□□ -0.14
PDZRN3-210ENST00000492909 TERB1Q8NA31 727 aa14.2□□□□□ -0.14
PDZRN3-210ENST00000492909 GSDMBQ8TAX9 411 aa14.2□□□□□ -0.14
PDZRN3-210ENST00000492909 FBF1Q8TES7 1133 aa14.2□□□□□ -0.14
PDZRN3-210ENST00000492909 SORCS1Q8WY21 1168 aa14.2□□□□□ -0.14
PDZRN3-210ENST00000492909 MRGPRX3Q96LB0 322 aa14.2□□□□□ -0.14
PDZRN3-210ENST00000492909 TRIB3Q96RU7 358 aa14.2□□□□□ -0.14
PDZRN3-210ENST00000492909 TMEM109Q9BVC6 243 aa14.2□□□□□ -0.14
PDZRN3-210ENST00000492909 ACSS3Q9H6R3 686 aa14.2□□□□□ -0.14
PDZRN3-210ENST00000492909 PLA2G4CQ9UP65 541 aa14.2□□□□□ -0.14
PDZRN3-210ENST00000492909 CHKBQ9Y259 395 aa14.2□□□□□ -0.14
PDZRN3-210ENST00000492909 FAM237BA0A1B0GVD1 139 aa14.19□□□□□ -0.14
PDZRN3-210ENST00000492909 EXOC1LA0A1B0GW35 172 aa14.19□□□□□ -0.14
PDZRN3-210ENST00000492909 GMNCA6NCL1 334 aa14.19□□□□□ -0.14
PDZRN3-210ENST00000492909 RASGRF2O14827 1237 aa14.19□□□□□ -0.14
PDZRN3-210ENST00000492909 TIMM44O43615 452 aa14.19□□□□□ -0.14
PDZRN3-210ENST00000492909 SEC24CP53992 1094 aa14.19□□□□□ -0.14
PDZRN3-210ENST00000492909 MAGOHP61326 146 aaKnown RBP14.19□□□□□ -0.14
PDZRN3-210ENST00000492909 ST8SIA6P61647 398 aa14.19□□□□□ -0.14
PDZRN3-210ENST00000492909 ARMC3Q5W041 872 aa14.19□□□□□ -0.14
PDZRN3-210ENST00000492909 TMEM135Q86UB9 458 aa14.19□□□□□ -0.14
PDZRN3-210ENST00000492909 PHTF2Q8N3S3 785 aa14.19□□□□□ -0.14
PDZRN3-210ENST00000492909 PPHLN1Q8NEY8 458 aaKnown RBP14.19□□□□□ -0.14
PDZRN3-210ENST00000492909 OR6K2Q8NGY2 324 aa14.19□□□□□ -0.14
PDZRN3-210ENST00000492909 CSGALNACT1Q8TDX6 532 aa14.19□□□□□ -0.14
PDZRN3-210ENST00000492909 PTCD2Q8WV60 388 aaKnown RBP14.19□□□□□ -0.14
PDZRN3-210ENST00000492909 TRIM56Q9BRZ2 755 aaKnown RBP14.19□□□□□ -0.14
PDZRN3-210ENST00000492909 ADGRE3Q9BY15 652 aa14.19□□□□□ -0.14
PDZRN3-210ENST00000492909 ROPN1BQ9BZX4 212 aaPredicted RBP14.19□□□□□ -0.14
PDZRN3-210ENST00000492909 CNOT10Q9H9A5 744 aaKnown RBP14.19□□□□□ -0.14
PDZRN3-210ENST00000492909 ROPN1Q9HAT0 212 aaPredicted RBP14.19□□□□□ -0.14
PDZRN3-210ENST00000492909 PLAC1Q9HBJ0 212 aa14.19□□□□□ -0.14
PDZRN3-210ENST00000492909 EVLQ9UI08 416 aaPredicted RBP14.19□□□□□ -0.14
PDZRN3-210ENST00000492909 RABGEF1Q9UJ41 708 aa14.19□□□□□ -0.14
PDZRN3-210ENST00000492909 SOX13Q9UN79 622 aa14.19□□□□□ -0.14
PDZRN3-210ENST00000492909 RPS6KL1Q9Y6S9 549 aa14.19□□□□□ -0.14
PDZRN3-210ENST00000492909 TBC1D3BA6NDS4 549 aa14.19□□□□□ -0.14
PDZRN3-210ENST00000492909 BNIP3LO60238 219 aa14.19□□□□□ -0.14
PDZRN3-210ENST00000492909 TCEA3O75764 348 aa14.19□□□□□ -0.14
PDZRN3-210ENST00000492909 USP1O94782 785 aa14.19□□□□□ -0.14
PDZRN3-210ENST00000492909 ALADP13716 330 aa14.19□□□□□ -0.14
PDZRN3-210ENST00000492909 ADRA1DP25100 572 aa14.19□□□□□ -0.14
PDZRN3-210ENST00000492909 RECQLP46063 649 aaPredicted RBP14.19□□□□□ -0.14
PDZRN3-210ENST00000492909 ZP2Q05996 745 aa14.19□□□□□ -0.14
PDZRN3-210ENST00000492909 BCL2L1Q07817 233 aa14.19□□□□□ -0.14
PDZRN3-210ENST00000492909 TRAF2Q12933 501 aa14.19□□□□□ -0.14
PDZRN3-210ENST00000492909 GALNT3Q14435 633 aa14.19□□□□□ -0.14
PDZRN3-210ENST00000492909 CRYMQ14894 314 aa14.19□□□□□ -0.14
PDZRN3-210ENST00000492909 PTPRNQ16849 979 aa14.19□□□□□ -0.14
PDZRN3-210ENST00000492909 LONRF1Q17RB8 773 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms