RNA–Protein interactions for RNA: ENST00000491292.5

ERCC3-208, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 4,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-208ENST00000491292 ZNF555Q8NEP9 628 aa9.9□□□□□ -0.83
ERCC3-208ENST00000491292 TRPC4APQ8TEL6 797 aa9.9□□□□□ -0.83
ERCC3-208ENST00000491292 MIR1-1HGQ9H1L0 117 aa9.9□□□□□ -0.83
ERCC3-208ENST00000491292 PLAC1Q9HBJ0 212 aa9.9□□□□□ -0.83
ERCC3-208ENST00000491292 SEMA4BQ9NPR2 832 aaPredicted RBP9.9□□□□□ -0.83
ERCC3-208ENST00000491292 TBC1D13Q9NVG8 400 aa9.9□□□□□ -0.83
ERCC3-208ENST00000491292 CACNA2D2Q9NY47 1150 aa9.9□□□□□ -0.83
ERCC3-208ENST00000491292 TRAF6Q9Y4K3 522 aa9.9□□□□□ -0.83
ERCC3-208ENST00000491292 COQ9O75208 318 aa9.89□□□□□ -0.83
ERCC3-208ENST00000491292 DAB1O75553 588 aa9.89□□□□□ -0.83
ERCC3-208ENST00000491292 MFN2O95140 757 aa9.89□□□□□ -0.83
ERCC3-208ENST00000491292 HGFP14210 728 aa9.89□□□□□ -0.83
ERCC3-208ENST00000491292 GLDCP23378 1020 aa9.89□□□□□ -0.83
ERCC3-208ENST00000491292 VARSP26640 1264 aaKnown RBP9.89□□□□□ -0.83
ERCC3-208ENST00000491292 IL5RAQ01344 420 aa9.89□□□□□ -0.83
ERCC3-208ENST00000491292 CDH17Q12864 832 aa9.89□□□□□ -0.83
ERCC3-208ENST00000491292 GTF2H3Q13889 308 aa9.89□□□□□ -0.83
ERCC3-208ENST00000491292 SQLEQ14534 574 aa9.89□□□□□ -0.83
ERCC3-208ENST00000491292 RBBP7Q16576 425 aa9.89□□□□□ -0.83
ERCC3-208ENST00000491292 ZNF829Q3KNS6 432 aaPredicted RBP9.89□□□□□ -0.83
ERCC3-208ENST00000491292 LCLAT1Q6UWP7 414 aa9.89□□□□□ -0.83
ERCC3-208ENST00000491292 GPR180Q86V85 440 aa9.89□□□□□ -0.83
ERCC3-208ENST00000491292 BEST2Q8NFU1 509 aa9.89□□□□□ -0.83
ERCC3-208ENST00000491292 C18orf25Q96B23 403 aaPredicted RBP9.89□□□□□ -0.83
ERCC3-208ENST00000491292 THUMPD3Q9BV44 507 aaKnown RBP9.89□□□□□ -0.83
ERCC3-208ENST00000491292 OLAHQ9NV23 265 aa9.89□□□□□ -0.83
ERCC3-208ENST00000491292 IFT80Q9P2H3 777 aaPredicted RBP9.89□□□□□ -0.83
ERCC3-208ENST00000491292 TUBGCP4Q9UGJ1 667 aa9.89□□□□□ -0.83
ERCC3-208ENST00000491292 BAG5Q9UL15 447 aa9.89□□□□□ -0.83
ERCC3-208ENST00000491292 CNTN6Q9UQ52 1028 aa9.89□□□□□ -0.83
ERCC3-208ENST00000491292 GPC6Q9Y625 555 aaPredicted RBP9.89□□□□□ -0.83
ERCC3-208ENST00000491292 COL22A1Q8NFW1 1626 aaPredicted RBP9.89□□□□□ -0.83
ERCC3-208ENST00000491292 TCAF2A6NFQ2 919 aa9.89□□□□□ -0.83
ERCC3-208ENST00000491292 C16orf96A6NNT2 1141 aa9.89□□□□□ -0.83
ERCC3-208ENST00000491292 IL7RP16871 459 aa9.89□□□□□ -0.83
ERCC3-208ENST00000491292 ZNF26P17031 533 aaPredicted RBP9.89□□□□□ -0.83
ERCC3-208ENST00000491292 HOXD12P35452 270 aa9.89□□□□□ -0.83
ERCC3-208ENST00000491292 CLK1P49759 484 aaKnown RBP9.89□□□□□ -0.83
ERCC3-208ENST00000491292 CDK18Q07002 472 aa9.89□□□□□ -0.83
ERCC3-208ENST00000491292 SPDYE2Q495Y8 402 aa9.89□□□□□ -0.83
ERCC3-208ENST00000491292 SGO1Q5FBB7 561 aa9.89□□□□□ -0.83
ERCC3-208ENST00000491292 XRRA1Q6P2D8 792 aa9.89□□□□□ -0.83
ERCC3-208ENST00000491292 SLCO6A1Q86UG4 719 aa9.89□□□□□ -0.83
ERCC3-208ENST00000491292 SFRP1Q8N474 314 aa9.89□□□□□ -0.83
ERCC3-208ENST00000491292 CDC26Q8NHZ8 85 aa9.89□□□□□ -0.83
ERCC3-208ENST00000491292 SETD4Q9NVD3 440 aa9.89□□□□□ -0.83
ERCC3-208ENST00000491292 ANAPC2Q9UJX6 822 aa9.89□□□□□ -0.83
ERCC3-208ENST00000491292 WDR37Q9Y2I8 494 aa9.89□□□□□ -0.83
ERCC3-208ENST00000491292 MTF2Q9Y483 593 aaPredicted RBP9.89□□□□□ -0.83
ERCC3-208ENST00000491292 TIMM22Q9Y584 194 aa9.89□□□□□ -0.83
ERCC3-208ENST00000491292 RREB1Q92766 1687 aa9.89□□□□□ -0.83
ERCC3-208ENST00000491292 MICAL3Q7RTP6 2002 aa9.89□□□□□ -0.83
ERCC3-208ENST00000491292 PRSS51A0A1B0GVH4 220 aa9.89□□□□□ -0.83
ERCC3-208ENST00000491292 SPATA31C2B4DYI2 1134 aa9.89□□□□□ -0.83
ERCC3-208ENST00000491292 HS6ST1O60243 411 aa9.89□□□□□ -0.83
ERCC3-208ENST00000491292 NADKO95544 446 aaPredicted RBP9.89□□□□□ -0.83
ERCC3-208ENST00000491292 FUCA1P04066 466 aa9.89□□□□□ -0.83
ERCC3-208ENST00000491292 GSTT2P0CG29 244 aa9.89□□□□□ -0.83
ERCC3-208ENST00000491292 GSTT2BP0CG30 244 aa9.89□□□□□ -0.83
ERCC3-208ENST00000491292 YBX3P16989 372 aaKnown RBP eCLIP9.89□□□□□ -0.83
ERCC3-208ENST00000491292 ATP5F1P24539 256 aaPredicted RBP9.89□□□□□ -0.83
ERCC3-208ENST00000491292 CD97P48960 835 aa9.89□□□□□ -0.83
ERCC3-208ENST00000491292 BACE1P56817 501 aa9.89□□□□□ -0.83
ERCC3-208ENST00000491292 SULT2A1Q06520 285 aa9.89□□□□□ -0.83
ERCC3-208ENST00000491292 TIGD2Q4W5G0 525 aa9.89□□□□□ -0.83
ERCC3-208ENST00000491292 RABL3Q5HYI8 236 aa9.89□□□□□ -0.83
ERCC3-208ENST00000491292 CCDC80Q76M96 950 aa9.89□□□□□ -0.83
ERCC3-208ENST00000491292 ARMCX6Q7L4S7 300 aa9.89□□□□□ -0.83
ERCC3-208ENST00000491292 PIGZQ86VD9 579 aa9.89□□□□□ -0.83
ERCC3-208ENST00000491292 CHERPQ8IWX8 916 aaKnown RBP9.89□□□□□ -0.83
ERCC3-208ENST00000491292 ARNTL2Q8WYA1 636 aa9.89□□□□□ -0.83
ERCC3-208ENST00000491292 GBA2Q9HCG7 927 aaPredicted RBP9.89□□□□□ -0.83
ERCC3-208ENST00000491292 ITM2CQ9NQX7 267 aa9.89□□□□□ -0.83
ERCC3-208ENST00000491292 PRMT7Q9NVM4 692 aaPredicted RBP9.89□□□□□ -0.83
ERCC3-208ENST00000491292 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.89□□□□□ -0.83
ERCC3-208ENST00000491292 ADAM28Q9UKQ2 775 aa9.89□□□□□ -0.83
ERCC3-208ENST00000491292 GOLGA8CPA6NN73 597 aa9.88□□□□□ -0.83
ERCC3-208ENST00000491292 H3BMQ9 156 aa9.88□□□□□ -0.83
ERCC3-208ENST00000491292 NOBOXO60393 691 aa9.88□□□□□ -0.83
ERCC3-208ENST00000491292 AHSGP02765 367 aa9.88□□□□□ -0.83
ERCC3-208ENST00000491292 CYP3A5P20815 502 aa9.88□□□□□ -0.83
ERCC3-208ENST00000491292 RPS9P46781 194 aaKnown RBP9.88□□□□□ -0.83
ERCC3-208ENST00000491292 EMP3P54852 163 aa9.88□□□□□ -0.83
ERCC3-208ENST00000491292 NIPAL4Q0D2K0 466 aa9.88□□□□□ -0.83
ERCC3-208ENST00000491292 NOMO2Q5JPE7 1267 aa9.88□□□□□ -0.83
ERCC3-208ENST00000491292 ARMCX2Q7L311 632 aa9.88□□□□□ -0.83
ERCC3-208ENST00000491292 PIWIL4Q7Z3Z4 852 aaKnown RBP9.88□□□□□ -0.83
ERCC3-208ENST00000491292 ATPAF2Q8N5M1 289 aa9.88□□□□□ -0.83
ERCC3-208ENST00000491292 TMEM102Q8N9M5 508 aaPredicted RBP9.88□□□□□ -0.83
ERCC3-208ENST00000491292 ESAMQ96AP7 390 aa9.88□□□□□ -0.83
ERCC3-208ENST00000491292 NSMCE2Q96MF7 247 aa9.88□□□□□ -0.83
ERCC3-208ENST00000491292 GLT1D1Q96MS3 346 aa9.88□□□□□ -0.83
ERCC3-208ENST00000491292 COG8Q96MW5 612 aa9.88□□□□□ -0.83
ERCC3-208ENST00000491292 C17orf80Q9BSJ5 609 aa9.88□□□□□ -0.83
ERCC3-208ENST00000491292 C6orf62Q9GZU0 229 aaPredicted RBP9.88□□□□□ -0.83
ERCC3-208ENST00000491292 DEFB129Q9H1M3 183 aa9.88□□□□□ -0.83
ERCC3-208ENST00000491292 RHOJQ9H4E5 214 aa9.88□□□□□ -0.83
ERCC3-208ENST00000491292 GOLGA2P5Q9HBQ8 144 aa9.88□□□□□ -0.83
ERCC3-208ENST00000491292 MKS1Q9NXB0 559 aa9.88□□□□□ -0.83
ERCC3-208ENST00000491292 HOXC10Q9NYD6 342 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms