RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 PNMA8BQ9ULN7 279 aaPredicted RBP18.18■□□□□ 0.5
HMGN1-219ENST00000491183 K7ESM1 405 aa18.17■□□□□ 0.5
HMGN1-219ENST00000491183 SCAMP1O15126 338 aa18.17■□□□□ 0.5
HMGN1-219ENST00000491183 MUSKO15146 869 aa18.17■□□□□ 0.5
HMGN1-219ENST00000491183 RARAP10276 462 aa18.17■□□□□ 0.5
HMGN1-219ENST00000491183 SUOXP51687 545 aa18.17■□□□□ 0.5
HMGN1-219ENST00000491183 IL10RBQ08334 325 aa18.17■□□□□ 0.5
HMGN1-219ENST00000491183 PIGHQ14442 188 aaPredicted RBP18.17■□□□□ 0.5
HMGN1-219ENST00000491183 GRM3Q14832 879 aa18.17■□□□□ 0.5
HMGN1-219ENST00000491183 ZSCAN23Q3MJ62 389 aa18.17■□□□□ 0.5
HMGN1-219ENST00000491183 BOLA3Q53S33 107 aa18.17■□□□□ 0.5
HMGN1-219ENST00000491183 HES3Q5TGS1 186 aa18.17■□□□□ 0.5
HMGN1-219ENST00000491183 POLNQ7Z5Q5 900 aa18.17■□□□□ 0.5
HMGN1-219ENST00000491183 PARGQ86W56 976 aa18.17■□□□□ 0.5
HMGN1-219ENST00000491183 TUBGCP5Q96RT8 1024 aa18.17■□□□□ 0.5
HMGN1-219ENST00000491183 ZWILCHQ9H900 591 aa18.17■□□□□ 0.5
HMGN1-219ENST00000491183 PCDH12Q9NPG4 1184 aa18.17■□□□□ 0.5
HMGN1-219ENST00000491183 NLGN3Q9NZ94 848 aa18.17■□□□□ 0.5
HMGN1-219ENST00000491183 COQ6Q9Y2Z9 468 aa18.17■□□□□ 0.5
HMGN1-219ENST00000491183 LUC7L2Q9Y383 392 aaKnown RBP18.17■□□□□ 0.5
HMGN1-219ENST00000491183 LY6G6EA0A0G2JKS1 128 aa18.16■□□□□ 0.5
HMGN1-219ENST00000491183 NEMP2A6NFY4 417 aa18.16■□□□□ 0.5
HMGN1-219ENST00000491183 H3BRJ5 948 aa18.16■□□□□ 0.5
HMGN1-219ENST00000491183 RIOK3O14730 519 aaKnown RBP18.16■□□□□ 0.5
HMGN1-219ENST00000491183 PRKCGP05129 697 aa18.16■□□□□ 0.5
HMGN1-219ENST00000491183 CYP1A2P05177 515 aa18.16■□□□□ 0.5
HMGN1-219ENST00000491183 JUNDP17535 347 aa18.16■□□□□ 0.5
HMGN1-219ENST00000491183 XPAP23025 273 aaPredicted RBP18.16■□□□□ 0.5
HMGN1-219ENST00000491183 DAB2P98082 770 aa18.16■□□□□ 0.5
HMGN1-219ENST00000491183 INSM1Q01101 510 aaPredicted RBP18.16■□□□□ 0.5
HMGN1-219ENST00000491183 SEMG2Q02383 582 aa18.16■□□□□ 0.5
HMGN1-219ENST00000491183 NSUN2Q08J23 767 aaKnown RBP eCLIP18.16■□□□□ 0.5
HMGN1-219ENST00000491183 ELP6Q0PNE2 266 aa18.16■□□□□ 0.5
HMGN1-219ENST00000491183 NFKBIBQ15653 356 aa18.16■□□□□ 0.5
HMGN1-219ENST00000491183 LZTR1Q8N653 840 aa18.16■□□□□ 0.5
HMGN1-219ENST00000491183 NIPA2Q8N8Q9 360 aa18.16■□□□□ 0.5
HMGN1-219ENST00000491183 ZNF548Q8NEK5 533 aaPredicted RBP18.16■□□□□ 0.5
HMGN1-219ENST00000491183 RFFLQ8WZ73 363 aa18.16■□□□□ 0.5
HMGN1-219ENST00000491183 HSPH1Q92598 858 aa18.16■□□□□ 0.5
HMGN1-219ENST00000491183 APOLD1Q96LR9 279 aa18.16■□□□□ 0.5
HMGN1-219ENST00000491183 TCEAL2Q9H3H9 227 aaPredicted RBP18.16■□□□□ 0.5
HMGN1-219ENST00000491183 SP110Q9HB58 689 aa18.16■□□□□ 0.5
HMGN1-219ENST00000491183 NENFQ9UMX5 172 aa18.16■□□□□ 0.5
HMGN1-219ENST00000491183 RAXQ9Y2V3 346 aa18.16■□□□□ 0.5
HMGN1-219ENST00000491183 CSNK1G3Q9Y6M4 447 aa18.16■□□□□ 0.5
HMGN1-219ENST00000491183 U3KQA8 63 aa18.16■□□□□ 0.5
HMGN1-219ENST00000491183 ALPPL2P10696 532 aa18.15■□□□□ 0.5
HMGN1-219ENST00000491183 CKMT1AP12532 417 aa18.15■□□□□ 0.5
HMGN1-219ENST00000491183 CASP14P31944 242 aa18.15■□□□□ 0.5
HMGN1-219ENST00000491183 HNF1BP35680 557 aa18.15■□□□□ 0.5
HMGN1-219ENST00000491183 YPEL5P62699 121 aa18.15■□□□□ 0.5
HMGN1-219ENST00000491183 SLC25A11Q02978 314 aaKnown RBP18.15■□□□□ 0.5
HMGN1-219ENST00000491183 SLC10A7Q0GE19 358 aa18.15■□□□□ 0.5
HMGN1-219ENST00000491183 RFTN1Q14699 578 aaPredicted RBP18.15■□□□□ 0.5
HMGN1-219ENST00000491183 WSCD2Q2TBF2 565 aa18.15■□□□□ 0.5
HMGN1-219ENST00000491183 HS1BP3Q53T59 392 aa18.15■□□□□ 0.5
HMGN1-219ENST00000491183 ALKBH5Q6P6C2 394 aaKnown RBP18.15■□□□□ 0.5
HMGN1-219ENST00000491183 BRAT1Q6PJG6 821 aa18.15■□□□□ 0.5
HMGN1-219ENST00000491183 RBFAQ8N0V3 343 aa18.15■□□□□ 0.5
HMGN1-219ENST00000491183 FAM181AQ8N9Y4 354 aa18.15■□□□□ 0.5
HMGN1-219ENST00000491183 ECHDC3Q96DC8 303 aa18.15■□□□□ 0.5
HMGN1-219ENST00000491183 IQCDQ96DY2 449 aa18.15■□□□□ 0.5
HMGN1-219ENST00000491183 CSPG4P5Q96PW8 444 aa18.15■□□□□ 0.5
HMGN1-219ENST00000491183 NUP85Q9BW27 656 aa18.15■□□□□ 0.5
HMGN1-219ENST00000491183 CINPQ9BW66 212 aaPredicted RBP18.15■□□□□ 0.5
HMGN1-219ENST00000491183 C1QTNF7Q9BXJ2 289 aa18.15■□□□□ 0.5
HMGN1-219ENST00000491183 XPO4Q9C0E2 1151 aaKnown RBP18.15■□□□□ 0.5
HMGN1-219ENST00000491183 PCDH18Q9HCL0 1135 aa18.15■□□□□ 0.5
HMGN1-219ENST00000491183 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.15■□□□□ 0.5
HMGN1-219ENST00000491183 IP6K2Q9UHH9 426 aa18.15■□□□□ 0.5
HMGN1-219ENST00000491183 ANAPC7Q9UJX3 599 aa18.15■□□□□ 0.5
HMGN1-219ENST00000491183 CHD6Q8TD26 2715 aa18.14■□□□□ 0.5
HMGN1-219ENST00000491183 TTC24A2A3L6 582 aaPredicted RBP18.14■□□□□ 0.49
HMGN1-219ENST00000491183 H3BM21 787 aa18.14■□□□□ 0.49
HMGN1-219ENST00000491183 AQP9O43315 295 aa18.14■□□□□ 0.49
HMGN1-219ENST00000491183 PEX11BO96011 259 aa18.14■□□□□ 0.49
HMGN1-219ENST00000491183 C6P13671 934 aa18.14■□□□□ 0.49
HMGN1-219ENST00000491183 EIF4A3P38919 411 aaKnown RBP18.14■□□□□ 0.49
HMGN1-219ENST00000491183 ARL4AP40617 200 aa18.14■□□□□ 0.49
HMGN1-219ENST00000491183 LIG3P49916 1009 aa18.14■□□□□ 0.49
HMGN1-219ENST00000491183 THOP1P52888 689 aa18.14■□□□□ 0.49
HMGN1-219ENST00000491183 E2F1Q01094 437 aa18.14■□□□□ 0.49
HMGN1-219ENST00000491183 PTK2BQ14289 1009 aa18.14■□□□□ 0.49
HMGN1-219ENST00000491183 LBRQ14739 615 aaKnown RBP18.14■□□□□ 0.49
HMGN1-219ENST00000491183 IRF4Q15306 451 aa18.14■□□□□ 0.49
HMGN1-219ENST00000491183 CCDC122Q5T0U0 273 aa18.14■□□□□ 0.49
HMGN1-219ENST00000491183 CACTIN-AS1Q8N1I8 211 aa18.14■□□□□ 0.49
HMGN1-219ENST00000491183 LMX1AQ8TE12 382 aa18.14■□□□□ 0.49
HMGN1-219ENST00000491183 TEKT4Q8WW24 435 aa18.14■□□□□ 0.49
HMGN1-219ENST00000491183 PSKH2Q96QS6 385 aa18.14■□□□□ 0.49
HMGN1-219ENST00000491183 DUSP23Q9BVJ7 150 aa18.14■□□□□ 0.49
HMGN1-219ENST00000491183 ATP13A3Q9H7F0 1226 aa18.14■□□□□ 0.49
HMGN1-219ENST00000491183 ATP8A1Q9Y2Q0 1164 aa18.14■□□□□ 0.49
HMGN1-219ENST00000491183 GPSM3Q9Y4H4 160 aa18.14■□□□□ 0.49
HMGN1-219ENST00000491183 PKD1L2Q7Z442 2459 aa18.14■□□□□ 0.49
HMGN1-219ENST00000491183 ADAMTS20P59510 1910 aa18.13■□□□□ 0.49
HMGN1-219ENST00000491183 TRAFD1O14545 582 aaPredicted RBP18.13■□□□□ 0.49
HMGN1-219ENST00000491183 MAFKO60675 156 aa18.13■□□□□ 0.49
HMGN1-219ENST00000491183 GCATO75600 419 aa18.13■□□□□ 0.49
HMGN1-219ENST00000491183 IL4RP24394 825 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms