RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 TMX4Q9H1E5 349 aaPredicted RBP2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 GANQ9H2C0 597 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 MRPL46Q9H2W6 279 aaKnown RBP2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 CENPHQ9H3R5 247 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 ZHX3Q9H4I2 956 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 TMEM206Q9H813 350 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 PPCSQ9HAB8 311 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 EBF2Q9HAK2 575 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 SLC40A1Q9NP59 571 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 KCNMB3Q9NPA1 279 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 ANLNQ9NQW6 1124 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 SAR1AQ9NR31 198 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 OLFML3Q9NRN5 406 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 SERTAD4Q9NUC0 356 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 ZDHHC18Q9NUE0 388 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 TRMT13Q9NUP7 481 aaKnown RBP2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 INTS9Q9NV88 658 aaKnown RBP2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 MRPS18AQ9NVS2 196 aaKnown RBP2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 RLIMQ9NVW2 624 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 EHD2Q9NZN4 543 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 TBC1D7Q9P0N9 293 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 PI4KBQ9UBF8 816 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 AMACRQ9UHK6 382 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 SLC12A6Q9UHW9 1150 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 SERPINB13Q9UIV8 391 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 DNAJC12Q9UKB3 198 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 ZDHHC8Q9ULC8 765 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 SUFUQ9UMX1 484 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 RPL26L1Q9UNX3 145 aaKnown RBP2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 SHOC2Q9UQ13 582 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 MRPS17Q9Y2R5 130 aaKnown RBP2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 ARL2BPQ9Y2Y0 163 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 RABGAP1Q9Y3P9 1069 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 SPEF1Q9Y4P9 236 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 CEP83Q9Y592 693 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 KIF13BQ9NQT8 1826 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 GRIN2DO15399 1336 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 FAM205AQ6ZU69 1335 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 KIAA1551Q9HCM1 1747 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 CDK5RAP2Q96SN8 1893 aa2.14□□□□□ -2.07
SNRNP40-207ENST00000491106 SMCHD1A6NHR9 2005 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 WDR81Q562E7 1941 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 F5H6K3 240 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 F8VZ95 297 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 K7ESF4 209 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 MYO1FO00160 1098 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 O00370 1275 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 MEIS2O14770 477 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 ATP2A1O14983 1001 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 EPHB6O15197 1021 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 ALOX15BO15296 676 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 TTI1O43156 1089 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 AP1G1O43747 822 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 SNX3O60493 162 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 CTNND1O60716 968 aaKnown RBP2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 DKC1O60832 514 aaKnown RBP eCLIP2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 MED24O75448 989 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 AKAP3O75969 853 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 RNF8O76064 485 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 ATP6V1G2O95670 118 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 TTC4O95801 387 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 FTCDO95954 541 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 FGGP02679 453 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 NR3C1P04150 777 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 VIMP08670 466 aaKnown RBP2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 POU2F2P09086 479 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 CLTAP09496 248 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 ALADP13716 330 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 TYRP14679 529 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 NQO1P15559 274 aaKnown RBP2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 CHN1P15882 459 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 LPOP22079 712 aaPredicted RBP2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 ITPKBP27987 946 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 CTGFP29279 349 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 ELF1P32519 619 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 HPDP32754 393 aaPredicted RBP2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 GTF2H1P32780 548 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 HOXD13P35453 343 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 SKIV2L2P42285 1042 aaKnown RBP2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 BTDP43251 543 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 FMO5P49326 533 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 CDKN1CP49918 316 aaPredicted RBP2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 HK3P52790 923 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 ITGA8P53708 1063 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 MFAP3P55082 362 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 RWDD2BP57060 319 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 SOX8P57073 446 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 RHBDL3P58872 404 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 PSMC6P62333 389 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 FKBP1AP62942 108 aaKnown RBP2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 IFI35P80217 286 aaPredicted RBP2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 MRPS25P82663 173 aaKnown RBP2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 IL9RQ01113 521 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 KLRC3Q07444 240 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 CCDC15Q0P6D6 951 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 FOXF2Q12947 444 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 PTP4A2Q12974 167 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 CALCOCO2Q13137 446 aa2.13□□□□□ -2.07
SNRNP40-207ENST00000491106 MAPK7Q13164 816 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms