RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 LINC00116Q8NCU8 138 aa11.37□□□□□ -0.59
CRNKL1-204ENST00000490910 SLC7A14Q8TBB6 771 aa11.37□□□□□ -0.59
CRNKL1-204ENST00000490910 CHPT1Q8WUD6 406 aa11.37□□□□□ -0.59
CRNKL1-204ENST00000490910 BHMTQ93088 406 aa11.37□□□□□ -0.59
CRNKL1-204ENST00000490910 DCPSQ96C86 337 aaKnown RBP11.37□□□□□ -0.59
CRNKL1-204ENST00000490910 ZNF512Q96ME7 567 aaPredicted RBP11.37□□□□□ -0.59
CRNKL1-204ENST00000490910 G3V2T6 193 aa11.36□□□□□ -0.59
CRNKL1-204ENST00000490910 GCATO75600 419 aa11.36□□□□□ -0.59
CRNKL1-204ENST00000490910 ERBB2P04626 1255 aa11.36□□□□□ -0.59
CRNKL1-204ENST00000490910 HGFP14210 728 aa11.36□□□□□ -0.59
CRNKL1-204ENST00000490910 KIZQ2M2Z5 673 aa11.36□□□□□ -0.59
CRNKL1-204ENST00000490910 TCAIMQ8N3R3 496 aa11.36□□□□□ -0.59
CRNKL1-204ENST00000490910 ELMO1Q92556 727 aa11.36□□□□□ -0.59
CRNKL1-204ENST00000490910 ASB2Q96Q27 587 aa11.36□□□□□ -0.59
CRNKL1-204ENST00000490910 PDCD2LQ9BRP1 358 aa11.36□□□□□ -0.59
CRNKL1-204ENST00000490910 IRF2BPLQ9H1B7 796 aa11.36□□□□□ -0.59
CRNKL1-204ENST00000490910 LHX5Q9H2C1 402 aa11.36□□□□□ -0.59
CRNKL1-204ENST00000490910 OXSMQ9NWU1 459 aa11.36□□□□□ -0.59
CRNKL1-204ENST00000490910 TBC1D14Q9P2M4 693 aa11.36□□□□□ -0.59
CRNKL1-204ENST00000490910 HSFX1Q9UBD0 423 aa11.36□□□□□ -0.59
CRNKL1-204ENST00000490910 SYNPO2Q9UMS6 1093 aa11.36□□□□□ -0.59
CRNKL1-204ENST00000490910 EFCAB10A6NFE3 127 aa11.36□□□□□ -0.59
CRNKL1-204ENST00000490910 HNRNPCL2B2RXH8 293 aa11.36□□□□□ -0.59
CRNKL1-204ENST00000490910 RSL1D1O76021 490 aaKnown RBP11.36□□□□□ -0.59
CRNKL1-204ENST00000490910 ATE1O95260 518 aa11.36□□□□□ -0.59
CRNKL1-204ENST00000490910 NPR1P16066 1061 aa11.36□□□□□ -0.59
CRNKL1-204ENST00000490910 MSH3P20585 1137 aa11.36□□□□□ -0.59
CRNKL1-204ENST00000490910 GRIA1P42261 906 aa11.36□□□□□ -0.59
CRNKL1-204ENST00000490910 NDST1P52848 882 aa11.36□□□□□ -0.59
CRNKL1-204ENST00000490910 RFTN1Q14699 578 aaPredicted RBP11.36□□□□□ -0.59
CRNKL1-204ENST00000490910 VPS26BQ4G0F5 336 aa11.36□□□□□ -0.59
CRNKL1-204ENST00000490910 CEP78Q5JTW2 689 aa11.36□□□□□ -0.59
CRNKL1-204ENST00000490910 IER5Q5VY09 327 aa11.36□□□□□ -0.59
CRNKL1-204ENST00000490910 XYLT1Q86Y38 959 aa11.36□□□□□ -0.59
CRNKL1-204ENST00000490910 COLGALT2Q8IYK4 626 aa11.36□□□□□ -0.59
CRNKL1-204ENST00000490910 SYTL5Q8TDW5 730 aaPredicted RBP11.36□□□□□ -0.59
CRNKL1-204ENST00000490910 MUC13Q9H3R2 512 aa11.36□□□□□ -0.59
CRNKL1-204ENST00000490910 PRDM12Q9H4Q4 367 aa11.36□□□□□ -0.59
CRNKL1-204ENST00000490910 RMND5AQ9H871 391 aa11.36□□□□□ -0.59
CRNKL1-204ENST00000490910 CCNB1IP1Q9NPC3 277 aa11.36□□□□□ -0.59
CRNKL1-204ENST00000490910 TRPV5Q9NQA5 729 aa11.36□□□□□ -0.59
CRNKL1-204ENST00000490910 TMX2Q9Y320 296 aa11.36□□□□□ -0.59
CRNKL1-204ENST00000490910 SPATA31A1Q5TZJ5 1347 aa11.36□□□□□ -0.59
CRNKL1-204ENST00000490910 ZNF99A8MXY4 864 aaPredicted RBP11.36□□□□□ -0.59
CRNKL1-204ENST00000490910 H0Y858 1186 aa11.36□□□□□ -0.59
CRNKL1-204ENST00000490910 NCAM2O15394 837 aa11.36□□□□□ -0.59
CRNKL1-204ENST00000490910 GAS2O43903 313 aaKnown RBP11.36□□□□□ -0.59
CRNKL1-204ENST00000490910 SOAT2O75908 522 aa11.36□□□□□ -0.59
CRNKL1-204ENST00000490910 FARP2O94887 1054 aaPredicted RBP11.36□□□□□ -0.59
CRNKL1-204ENST00000490910 ZNF682O95780 498 aa11.36□□□□□ -0.59
CRNKL1-204ENST00000490910 PSMD5Q16401 504 aa11.36□□□□□ -0.59
CRNKL1-204ENST00000490910 UGCGQ16739 394 aa11.36□□□□□ -0.59
CRNKL1-204ENST00000490910 RFX4Q33E94 735 aa11.36□□□□□ -0.59
CRNKL1-204ENST00000490910 PDZK1Q5T2W1 519 aa11.36□□□□□ -0.59
CRNKL1-204ENST00000490910 IGFN1Q86VF2 1251 aa11.36□□□□□ -0.59
CRNKL1-204ENST00000490910 ANKRD13BQ86YJ7 626 aa11.36□□□□□ -0.59
CRNKL1-204ENST00000490910 CPB2Q96IY4 423 aa11.36□□□□□ -0.59
CRNKL1-204ENST00000490910 TNIP3Q96KP6 325 aa11.36□□□□□ -0.59
CRNKL1-204ENST00000490910 ZNF597Q96LX8 424 aa11.36□□□□□ -0.59
CRNKL1-204ENST00000490910 PPP1R2P1Q96PQ5 205 aa11.36□□□□□ -0.59
CRNKL1-204ENST00000490910 NEK6Q9HC98 313 aa11.36□□□□□ -0.59
CRNKL1-204ENST00000490910 SMOXQ9NWM0 555 aa11.36□□□□□ -0.59
CRNKL1-204ENST00000490910 DPP3Q9NY33 737 aa11.36□□□□□ -0.59
CRNKL1-204ENST00000490910 POLLQ9UGP5 575 aa11.36□□□□□ -0.59
CRNKL1-204ENST00000490910 KLHL3Q9UH77 587 aa11.36□□□□□ -0.59
CRNKL1-204ENST00000490910 FAM47E-STBD1D6RA91 191 aa11.35□□□□□ -0.59
CRNKL1-204ENST00000490910 E5RI56 91 aa11.35□□□□□ -0.59
CRNKL1-204ENST00000490910 ABCB7O75027 752 aa11.35□□□□□ -0.59
CRNKL1-204ENST00000490910 VPS4BO75351 444 aa11.35□□□□□ -0.59
CRNKL1-204ENST00000490910 COL6A2P12110 1019 aa11.35□□□□□ -0.59
CRNKL1-204ENST00000490910 VARSP26640 1264 aaKnown RBP11.35□□□□□ -0.59
CRNKL1-204ENST00000490910 GEMP55040 296 aa11.35□□□□□ -0.59
CRNKL1-204ENST00000490910 ARPP19P56211 112 aa11.35□□□□□ -0.59
CRNKL1-204ENST00000490910 POU4F1Q01851 419 aa11.35□□□□□ -0.59
CRNKL1-204ENST00000490910 TNFAIP1Q13829 316 aa11.35□□□□□ -0.59
CRNKL1-204ENST00000490910 KCNJ8Q15842 424 aa11.35□□□□□ -0.59
CRNKL1-204ENST00000490910 RBM48Q5RL73 367 aaKnown RBP11.35□□□□□ -0.59
CRNKL1-204ENST00000490910 MPZL3Q6UWV2 235 aa11.35□□□□□ -0.59
CRNKL1-204ENST00000490910 ZPBP2Q6X784 338 aa11.35□□□□□ -0.59
CRNKL1-204ENST00000490910 LUZP2Q86TE4 346 aa11.35□□□□□ -0.59
CRNKL1-204ENST00000490910 PROSER1Q86XN7 944 aa11.35□□□□□ -0.59
CRNKL1-204ENST00000490910 RAB43Q86YS6 212 aa11.35□□□□□ -0.59
CRNKL1-204ENST00000490910 CHERPQ8IWX8 916 aaKnown RBP11.35□□□□□ -0.59
CRNKL1-204ENST00000490910 LRRC71Q8N4P6 559 aa11.35□□□□□ -0.59
CRNKL1-204ENST00000490910 FNDC5Q8NAU1 212 aa11.35□□□□□ -0.59
CRNKL1-204ENST00000490910 SIGLEC10Q96LC7 697 aa11.35□□□□□ -0.59
CRNKL1-204ENST00000490910 DMRTB1Q96MA1 342 aa11.35□□□□□ -0.59
CRNKL1-204ENST00000490910 ZNF556Q9HAH1 456 aa11.35□□□□□ -0.59
CRNKL1-204ENST00000490910 MAGEE1Q9HCI5 957 aa11.35□□□□□ -0.59
CRNKL1-204ENST00000490910 GMPPBQ9Y5P6 360 aa11.35□□□□□ -0.59
CRNKL1-204ENST00000490910 SNX8Q9Y5X2 465 aa11.35□□□□□ -0.59
CRNKL1-204ENST00000490910 PMF1-BGLAPU3KQ54 211 aa11.35□□□□□ -0.59
CRNKL1-204ENST00000490910 COL1A1P02452 1464 aaPredicted RBP11.35□□□□□ -0.59
CRNKL1-204ENST00000490910 SNED1Q8TER0 1413 aa11.35□□□□□ -0.59
CRNKL1-204ENST00000490910 KRT87PA6NCN2 255 aa11.35□□□□□ -0.59
CRNKL1-204ENST00000490910 SYNCRIPO60506 623 aaKnown RBP11.35□□□□□ -0.59
CRNKL1-204ENST00000490910 PDE9AO76083 593 aa11.35□□□□□ -0.59
CRNKL1-204ENST00000490910 ANGPTL1O95841 491 aa11.35□□□□□ -0.59
CRNKL1-204ENST00000490910 LTA4HP09960 611 aaKnown RBP11.35□□□□□ -0.59
CRNKL1-204ENST00000490910 DNAJB2P25686 324 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms