RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 PCDH18Q9HCL0 1135 aa31.67■■■□□ 2.66
LDB1-204ENST00000490751 FAM149AA5PLN7 773 aa31.66■■■□□ 2.66
LDB1-204ENST00000490751 FFAR2O15552 330 aa31.66■■■□□ 2.66
LDB1-204ENST00000490751 SIGLEC6O43699 453 aa31.66■■■□□ 2.66
LDB1-204ENST00000490751 C1SP09871 688 aa31.66■■■□□ 2.66
LDB1-204ENST00000490751 CKMT2P17540 419 aa31.66■■■□□ 2.66
LDB1-204ENST00000490751 IGFALSP35858 605 aa31.66■■■□□ 2.66
LDB1-204ENST00000490751 PFN3P60673 137 aa31.66■■■□□ 2.66
LDB1-204ENST00000490751 TPRG1LQ5T0D9 272 aa31.66■■■□□ 2.66
LDB1-204ENST00000490751 BRAT1Q6PJG6 821 aa31.66■■■□□ 2.66
LDB1-204ENST00000490751 ZSWIM9Q86XI8 627 aa31.66■■■□□ 2.66
LDB1-204ENST00000490751 OR4C6Q8NH72 309 aa31.66■■■□□ 2.66
LDB1-204ENST00000490751 ZNF564Q8TBZ8 553 aaPredicted RBP31.66■■■□□ 2.66
LDB1-204ENST00000490751 C1QTNF7Q9BXJ2 289 aa31.66■■■□□ 2.66
LDB1-204ENST00000490751 ATP13A3Q9H7F0 1226 aa31.66■■■□□ 2.66
LDB1-204ENST00000490751 PCDH12Q9NPG4 1184 aa31.66■■■□□ 2.66
LDB1-204ENST00000490751 SERPINA4P29622 427 aa31.65■■■□□ 2.66
LDB1-204ENST00000490751 SSR1P43307 286 aaKnown RBP31.65■■■□□ 2.66
LDB1-204ENST00000490751 HNRNPKP61978 463 aaKnown RBP eCLIP31.65■■■□□ 2.66
LDB1-204ENST00000490751 ZNF211Q13398 564 aaPredicted RBP31.65■■■□□ 2.66
LDB1-204ENST00000490751 TRIM14Q14142 442 aa31.65■■■□□ 2.66
LDB1-204ENST00000490751 TMCO4Q5TGY1 634 aa31.65■■■□□ 2.66
LDB1-204ENST00000490751 SEPT3Q9UH03 358 aa31.65■■■□□ 2.66
LDB1-204ENST00000490751 MUSKO15146 869 aa31.64■■■□□ 2.66
LDB1-204ENST00000490751 CSF2P04141 144 aa31.64■■■□□ 2.66
LDB1-204ENST00000490751 CDK4P11802 303 aa31.64■■■□□ 2.66
LDB1-204ENST00000490751 NME1P15531 152 aaKnown RBP31.64■■■□□ 2.66
LDB1-204ENST00000490751 NSUN2Q08J23 767 aaKnown RBP eCLIP31.64■■■□□ 2.66
LDB1-204ENST00000490751 KRT81Q14533 505 aa31.64■■■□□ 2.66
LDB1-204ENST00000490751 LBRQ14739 615 aaKnown RBP31.64■■■□□ 2.66
LDB1-204ENST00000490751 HS1BP3Q53T59 392 aa31.64■■■□□ 2.66
LDB1-204ENST00000490751 ERAP2Q6P179 960 aa31.64■■■□□ 2.66
LDB1-204ENST00000490751 OR8K1Q8NGG5 319 aa31.64■■■□□ 2.66
LDB1-204ENST00000490751 ZNF599Q96NL3 588 aa31.64■■■□□ 2.66
LDB1-204ENST00000490751 PSKH2Q96QS6 385 aa31.64■■■□□ 2.66
LDB1-204ENST00000490751 CTTNBP2NLQ9P2B4 639 aa31.64■■■□□ 2.66
LDB1-204ENST00000490751 GOLGA4Q13439 2230 aaKnown RBP31.64■■■□□ 2.66
LDB1-204ENST00000490751 CAPNS1P04632 268 aa31.63■■■□□ 2.65
LDB1-204ENST00000490751 GIMD1P0DJR0 217 aa31.63■■■□□ 2.65
LDB1-204ENST00000490751 CDH6P55285 790 aa31.63■■■□□ 2.65
LDB1-204ENST00000490751 BCL2L1Q07817 233 aa31.63■■■□□ 2.65
LDB1-204ENST00000490751 SLC10A7Q0GE19 358 aa31.63■■■□□ 2.65
LDB1-204ENST00000490751 SLC18A3Q16572 532 aa31.63■■■□□ 2.65
LDB1-204ENST00000490751 TMPRSS12Q86WS5 348 aa31.63■■■□□ 2.65
LDB1-204ENST00000490751 TP53I13Q8NBR0 393 aaPredicted RBP31.63■■■□□ 2.65
LDB1-204ENST00000490751 RNF214Q8ND24 703 aa31.63■■■□□ 2.65
LDB1-204ENST00000490751 DNAJC7Q99615 494 aa31.63■■■□□ 2.65
LDB1-204ENST00000490751 PACSIN1Q9BY11 444 aa31.63■■■□□ 2.65
LDB1-204ENST00000490751 MBNL1Q9NR56 388 aaKnown RBP31.63■■■□□ 2.65
LDB1-204ENST00000490751 ATP8A1Q9Y2Q0 1164 aa31.63■■■□□ 2.65
LDB1-204ENST00000490751 COQ6Q9Y2Z9 468 aa31.63■■■□□ 2.65
LDB1-204ENST00000490751 SHROOM3Q8TF72 1996 aa31.63■■■□□ 2.65
LDB1-204ENST00000490751 H3BM21 787 aa31.62■■■□□ 2.65
LDB1-204ENST00000490751 RIOK3O14730 519 aaKnown RBP31.62■■■□□ 2.65
LDB1-204ENST00000490751 PRKCGP05129 697 aa31.62■■■□□ 2.65
LDB1-204ENST00000490751 SERPINB6P35237 376 aa31.62■■■□□ 2.65
LDB1-204ENST00000490751 SCNN1BP51168 640 aa31.62■■■□□ 2.65
LDB1-204ENST00000490751 RENBPP51606 427 aa31.62■■■□□ 2.65
LDB1-204ENST00000490751 THOP1P52888 689 aa31.62■■■□□ 2.65
LDB1-204ENST00000490751 CLDN6P56747 220 aa31.62■■■□□ 2.65
LDB1-204ENST00000490751 ILKQ13418 452 aa31.62■■■□□ 2.65
LDB1-204ENST00000490751 HADHQ16836 314 aaKnown RBP31.62■■■□□ 2.65
LDB1-204ENST00000490751 CTNNBL1Q8WYA6 563 aaPredicted RBP31.62■■■□□ 2.65
LDB1-204ENST00000490751 KLF15Q9UIH9 416 aa31.62■■■□□ 2.65
LDB1-204ENST00000490751 NEMP2A6NFY4 417 aa31.61■■■□□ 2.65
LDB1-204ENST00000490751 SRRM3A6NNA2 597 aaPredicted RBP31.61■■■□□ 2.65
LDB1-204ENST00000490751 H2AFZP0C0S5 128 aa31.61■■■□□ 2.65
LDB1-204ENST00000490751 ALPPL2P10696 532 aa31.61■■■□□ 2.65
LDB1-204ENST00000490751 C6P13671 934 aa31.61■■■□□ 2.65
LDB1-204ENST00000490751 ACP1P24666 158 aa31.61■■■□□ 2.65
LDB1-204ENST00000490751 GJC1P36383 396 aa31.61■■■□□ 2.65
LDB1-204ENST00000490751 MMP12P39900 470 aa31.61■■■□□ 2.65
LDB1-204ENST00000490751 AP1S1P61966 158 aa31.61■■■□□ 2.65
LDB1-204ENST00000490751 DAB2P98082 770 aa31.61■■■□□ 2.65
LDB1-204ENST00000490751 SEMG2Q02383 582 aa31.61■■■□□ 2.65
LDB1-204ENST00000490751 ZNF235Q14590 738 aa31.61■■■□□ 2.65
LDB1-204ENST00000490751 IRF4Q15306 451 aa31.61■■■□□ 2.65
LDB1-204ENST00000490751 H2AFVQ71UI9 128 aa31.61■■■□□ 2.65
LDB1-204ENST00000490751 CPNE8Q86YQ8 564 aa31.61■■■□□ 2.65
LDB1-204ENST00000490751 VSTM4Q8IW00 320 aa31.61■■■□□ 2.65
LDB1-204ENST00000490751 ATPAF2Q8N5M1 289 aa31.61■■■□□ 2.65
LDB1-204ENST00000490751 PAF1Q8N7H5 531 aa31.61■■■□□ 2.65
LDB1-204ENST00000490751 ZNF548Q8NEK5 533 aaPredicted RBP31.61■■■□□ 2.65
LDB1-204ENST00000490751 ECHDC3Q96DC8 303 aa31.61■■■□□ 2.65
LDB1-204ENST00000490751 DEF6Q9H4E7 631 aa31.61■■■□□ 2.65
LDB1-204ENST00000490751 CCDC86Q9H6F5 360 aaKnown RBP31.61■■■□□ 2.65
LDB1-204ENST00000490751 NLGN3Q9NZ94 848 aa31.61■■■□□ 2.65
LDB1-204ENST00000490751 RCOR3Q9P2K3 495 aaPredicted RBP31.61■■■□□ 2.65
LDB1-204ENST00000490751 UVRAGQ9P2Y5 699 aa31.61■■■□□ 2.65
LDB1-204ENST00000490751 NEBLO76041 1014 aa31.6■■■□□ 2.65
LDB1-204ENST00000490751 PEX11BO96011 259 aa31.6■■■□□ 2.65
LDB1-204ENST00000490751 CD48P09326 243 aa31.6■■■□□ 2.65
LDB1-204ENST00000490751 JUNDP17535 347 aa31.6■■■□□ 2.65
LDB1-204ENST00000490751 YPEL5P62699 121 aa31.6■■■□□ 2.65
LDB1-204ENST00000490751 EIF2B5Q13144 721 aaKnown RBP31.6■■■□□ 2.65
LDB1-204ENST00000490751 MMRN1Q13201 1228 aa31.6■■■□□ 2.65
LDB1-204ENST00000490751 PTK2BQ14289 1009 aa31.6■■■□□ 2.65
LDB1-204ENST00000490751 ASTE1Q2TB18 679 aaPredicted RBP31.6■■■□□ 2.65
LDB1-204ENST00000490751 PROSER1Q86XN7 944 aa31.6■■■□□ 2.65
LDB1-204ENST00000490751 MDM1Q8TC05 714 aa31.6■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms