RNA–Protein interactions for RNA: ENST00000490539.1

CSTF1-205, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-205ENST00000490539 UBXN1Q04323 297 aa4.91□□□□□ -1.62
CSTF1-205ENST00000490539 GPR17Q13304 367 aa4.91□□□□□ -1.62
CSTF1-205ENST00000490539 ZNF699Q32M78 642 aa4.91□□□□□ -1.62
CSTF1-205ENST00000490539 USP39Q53GS9 565 aaKnown RBP4.91□□□□□ -1.62
CSTF1-205ENST00000490539 ARHGAP15Q53QZ3 475 aa4.91□□□□□ -1.62
CSTF1-205ENST00000490539 COBLL1Q53SF7 1204 aa4.91□□□□□ -1.62
CSTF1-205ENST00000490539 ZNF667Q5HYK9 610 aa4.91□□□□□ -1.62
CSTF1-205ENST00000490539 SPDYAQ5MJ70 313 aa4.91□□□□□ -1.62
CSTF1-205ENST00000490539 FKBP15Q5T1M5 1219 aa4.91□□□□□ -1.62
CSTF1-205ENST00000490539 CRELD2Q6UXH1 353 aaPredicted RBP4.91□□□□□ -1.62
CSTF1-205ENST00000490539 SPATA31D4Q6ZUB0 917 aa4.91□□□□□ -1.62
CSTF1-205ENST00000490539 TAS1R1Q7RTX1 841 aa4.91□□□□□ -1.62
CSTF1-205ENST00000490539 ZNF572Q7Z3I7 529 aaPredicted RBP4.91□□□□□ -1.62
CSTF1-205ENST00000490539 SPRED1Q7Z699 444 aa4.91□□□□□ -1.62
CSTF1-205ENST00000490539 GPR149Q86SP6 731 aa4.91□□□□□ -1.62
CSTF1-205ENST00000490539 SPATA2LQ8IUW3 424 aaPredicted RBP4.91□□□□□ -1.62
CSTF1-205ENST00000490539 C1orf210Q8IVY1 113 aa4.91□□□□□ -1.62
CSTF1-205ENST00000490539 RNF168Q8IYW5 571 aaPredicted RBP4.91□□□□□ -1.62
CSTF1-205ENST00000490539 ADGRF2Q8IZF7 708 aa4.91□□□□□ -1.62
CSTF1-205ENST00000490539 NOA1Q8NC60 698 aaKnown RBP4.91□□□□□ -1.62
CSTF1-205ENST00000490539 KIAA0895Q8NCT3 520 aa4.91□□□□□ -1.62
CSTF1-205ENST00000490539 OR5M3Q8NGP4 307 aa4.91□□□□□ -1.62
CSTF1-205ENST00000490539 PPP1R14CQ8TAE6 165 aa4.91□□□□□ -1.62
CSTF1-205ENST00000490539 LNX1Q8TBB1 728 aaPredicted RBP4.91□□□□□ -1.62
CSTF1-205ENST00000490539 SPPL2BQ8TCT7 592 aa4.91□□□□□ -1.62
CSTF1-205ENST00000490539 SLC22A17Q8WUG5 538 aa4.91□□□□□ -1.62
CSTF1-205ENST00000490539 MSLNLQ96KJ4 702 aa4.91□□□□□ -1.62
CSTF1-205ENST00000490539 TNIP3Q96KP6 325 aa4.91□□□□□ -1.62
CSTF1-205ENST00000490539 GPHA2Q96T91 129 aa4.91□□□□□ -1.62
CSTF1-205ENST00000490539 CLSTN3Q9BQT9 956 aa4.91□□□□□ -1.62
CSTF1-205ENST00000490539 ACBD6Q9BR61 282 aa4.91□□□□□ -1.62
CSTF1-205ENST00000490539 NUP58Q9BVL2 599 aa4.91□□□□□ -1.62
CSTF1-205ENST00000490539 APOL5Q9BWW9 433 aa4.91□□□□□ -1.62
CSTF1-205ENST00000490539 VN1R3Q9BXE9 311 aa4.91□□□□□ -1.62
CSTF1-205ENST00000490539 RHOBTB2Q9BYZ6 727 aa4.91□□□□□ -1.62
CSTF1-205ENST00000490539 TSGA10Q9BZW7 698 aa4.91□□□□□ -1.62
CSTF1-205ENST00000490539 GPR88Q9GZN0 384 aa4.91□□□□□ -1.62
CSTF1-205ENST00000490539 VPS16Q9H269 839 aa4.91□□□□□ -1.62
CSTF1-205ENST00000490539 ASAH2Q9NR71 780 aa4.91□□□□□ -1.62
CSTF1-205ENST00000490539 TAB2Q9NYJ8 693 aa4.91□□□□□ -1.62
CSTF1-205ENST00000490539 HSFX1Q9UBD0 423 aa4.91□□□□□ -1.62
CSTF1-205ENST00000490539 CACNG4Q9UBN1 327 aa4.91□□□□□ -1.62
CSTF1-205ENST00000490539 AFF4Q9UHB7 1163 aaKnown RBP4.91□□□□□ -1.62
CSTF1-205ENST00000490539 PRSS50Q9UI38 385 aa4.91□□□□□ -1.62
CSTF1-205ENST00000490539 MCM8Q9UJA3 840 aa4.91□□□□□ -1.62
CSTF1-205ENST00000490539 FBXL5Q9UKA1 691 aa4.91□□□□□ -1.62
CSTF1-205ENST00000490539 FBXW11Q9UKB1 542 aa4.91□□□□□ -1.62
CSTF1-205ENST00000490539 LUC7L2Q9Y383 392 aaKnown RBP4.91□□□□□ -1.62
CSTF1-205ENST00000490539 RRP15Q9Y3B9 282 aaKnown RBP4.91□□□□□ -1.62
CSTF1-205ENST00000490539 ASB3Q9Y575 518 aa4.91□□□□□ -1.62
CSTF1-205ENST00000490539 SAR1BQ9Y6B6 198 aa4.91□□□□□ -1.62
CSTF1-205ENST00000490539 COL4A3Q01955 1670 aa4.91□□□□□ -1.62
CSTF1-205ENST00000490539 KIAA1671Q9BY89 1806 aa4.9□□□□□ -1.62
CSTF1-205ENST00000490539 PLXNA4Q9HCM2 1894 aa4.9□□□□□ -1.62
CSTF1-205ENST00000490539 CNOT1A5YKK6 2376 aaKnown RBP4.9□□□□□ -1.62
CSTF1-205ENST00000490539 A0A0A6YYK5 440 aaPredicted RBP4.9□□□□□ -1.63
CSTF1-205ENST00000490539 A8MXQ7 604 aa4.9□□□□□ -1.63
CSTF1-205ENST00000490539 EIF3CLB5ME19 914 aaKnown RBP4.9□□□□□ -1.63
CSTF1-205ENST00000490539 PES1O00541 588 aaKnown RBP4.9□□□□□ -1.63
CSTF1-205ENST00000490539 CCL16O15467 120 aa4.9□□□□□ -1.63
CSTF1-205ENST00000490539 LY86O95711 162 aa4.9□□□□□ -1.63
CSTF1-205ENST00000490539 GLP2RO95838 553 aa4.9□□□□□ -1.63
CSTF1-205ENST00000490539 SYF2O95926 243 aaKnown RBP4.9□□□□□ -1.63
CSTF1-205ENST00000490539 POU2F2P09086 479 aa4.9□□□□□ -1.63
CSTF1-205ENST00000490539 CLEC2LP0C7M8 214 aa4.9□□□□□ -1.63
CSTF1-205ENST00000490539 CCNE1P24864 410 aa4.9□□□□□ -1.63
CSTF1-205ENST00000490539 ACRV1P26436 265 aa4.9□□□□□ -1.63
CSTF1-205ENST00000490539 ANXA13P27216 316 aa4.9□□□□□ -1.63
CSTF1-205ENST00000490539 HOXD13P35453 343 aa4.9□□□□□ -1.63
CSTF1-205ENST00000490539 GNL1P36915 607 aaPredicted RBP4.9□□□□□ -1.63
CSTF1-205ENST00000490539 MAGEA9P43362 315 aa4.9□□□□□ -1.63
CSTF1-205ENST00000490539 MXI1P50539 228 aa4.9□□□□□ -1.63
CSTF1-205ENST00000490539 PDE6CP51160 858 aa4.9□□□□□ -1.63
CSTF1-205ENST00000490539 GUCY2FP51841 1108 aa4.9□□□□□ -1.63
CSTF1-205ENST00000490539 HMGA2P52926 109 aa4.9□□□□□ -1.63
CSTF1-205ENST00000490539 WNT3AP56704 352 aa4.9□□□□□ -1.63
CSTF1-205ENST00000490539 ZBED6P86452 979 aa4.9□□□□□ -1.63
CSTF1-205ENST00000490539 TMPRSS15P98073 1019 aa4.9□□□□□ -1.63
CSTF1-205ENST00000490539 MEF2AQ02078 507 aaPredicted RBP4.9□□□□□ -1.63
CSTF1-205ENST00000490539 DUSP2Q05923 314 aa4.9□□□□□ -1.63
CSTF1-205ENST00000490539 CD69Q07108 199 aa4.9□□□□□ -1.63
CSTF1-205ENST00000490539 MGAT5Q09328 741 aa4.9□□□□□ -1.63
CSTF1-205ENST00000490539 STAT4Q14765 748 aa4.9□□□□□ -1.63
CSTF1-205ENST00000490539 ELAVL1Q15717 326 aaKnown RBP4.9□□□□□ -1.63
CSTF1-205ENST00000490539 MGAT5BQ3V5L5 792 aa4.9□□□□□ -1.63
CSTF1-205ENST00000490539 PABPC1LQ4VXU2 614 aaKnown RBP4.9□□□□□ -1.63
CSTF1-205ENST00000490539 SLC39A12Q504Y0 691 aa4.9□□□□□ -1.63
CSTF1-205ENST00000490539 DCAF17Q5H9S7 520 aaPredicted RBP4.9□□□□□ -1.63
CSTF1-205ENST00000490539 CCDC122Q5T0U0 273 aa4.9□□□□□ -1.63
CSTF1-205ENST00000490539 CCDC181Q5TID7 509 aa4.9□□□□□ -1.63
CSTF1-205ENST00000490539 RNF219Q5W0B1 726 aaPredicted RBP4.9□□□□□ -1.63
CSTF1-205ENST00000490539 WSCD1Q658N2 575 aa4.9□□□□□ -1.63
CSTF1-205ENST00000490539 LMBRD2Q68DH5 695 aaPredicted RBP4.9□□□□□ -1.63
CSTF1-205ENST00000490539 KRT39Q6A163 491 aa4.9□□□□□ -1.63
CSTF1-205ENST00000490539 CENPPQ6IPU0 288 aa4.9□□□□□ -1.63
CSTF1-205ENST00000490539 CCDC70Q6NSX1 233 aa4.9□□□□□ -1.63
CSTF1-205ENST00000490539 TTI2Q6NXR4 508 aa4.9□□□□□ -1.63
CSTF1-205ENST00000490539 SYCE2Q6PIF2 218 aa4.9□□□□□ -1.63
CSTF1-205ENST00000490539 WDR59Q6PJI9 974 aa4.9□□□□□ -1.63
CSTF1-205ENST00000490539 FOXR2Q6PJQ5 311 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms