RNA–Protein interactions for RNA: ENST00000490399.5

PRPF4B-207, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 576 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-207ENST00000490399 NEXNQ0ZGT2 675 aa4.65□□□□□ -1.67
PRPF4B-207ENST00000490399 LCE1AQ5T7P2 110 aa4.65□□□□□ -1.67
PRPF4B-207ENST00000490399 HIST2H2BCQ6DN03 193 aa4.65□□□□□ -1.67
PRPF4B-207ENST00000490399 HIST2H2BDQ6DRA6 164 aa4.65□□□□□ -1.67
PRPF4B-207ENST00000490399 PATL1Q86TB9 770 aaKnown RBP4.65□□□□□ -1.67
PRPF4B-207ENST00000490399 B4GALNT2Q8NHY0 566 aa4.65□□□□□ -1.67
PRPF4B-207ENST00000490399 ERGIC1Q969X5 290 aa4.65□□□□□ -1.67
PRPF4B-207ENST00000490399 PABPC5Q96DU9 382 aaKnown RBP4.65□□□□□ -1.67
PRPF4B-207ENST00000490399 SIN3AQ96ST3 1273 aa4.65□□□□□ -1.67
PRPF4B-207ENST00000490399 MXRA8Q9BRK3 442 aa4.65□□□□□ -1.67
PRPF4B-207ENST00000490399 WACQ9BTA9 647 aa4.65□□□□□ -1.67
PRPF4B-207ENST00000490399 CYSLTR2Q9NS75 346 aa4.65□□□□□ -1.67
PRPF4B-207ENST00000490399 HIF1ANQ9NWT6 349 aa4.65□□□□□ -1.67
PRPF4B-207ENST00000490399 MPP6Q9NZW5 540 aa4.65□□□□□ -1.67
PRPF4B-207ENST00000490399 MYO6Q9UM54 1294 aa4.65□□□□□ -1.67
PRPF4B-207ENST00000490399 CARD8Q9Y2G2 431 aa4.65□□□□□ -1.67
PRPF4B-207ENST00000490399 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.65□□□□□ -1.67
PRPF4B-207ENST00000490399 TMEM98Q9Y2Y6 226 aa4.65□□□□□ -1.67
PRPF4B-207ENST00000490399 LSM4Q9Y4Z0 139 aaKnown RBP4.65□□□□□ -1.67
PRPF4B-207ENST00000490399 A0A0U1RQF3 1178 aa4.64□□□□□ -1.67
PRPF4B-207ENST00000490399 NPIPB11E5RHQ5 1161 aa4.64□□□□□ -1.67
PRPF4B-207ENST00000490399 BCAT2O15382 392 aaPredicted RBP4.64□□□□□ -1.67
PRPF4B-207ENST00000490399 SNHG28P0DPA3 235 aa4.64□□□□□ -1.67
PRPF4B-207ENST00000490399 PCNAP12004 261 aa4.64□□□□□ -1.67
PRPF4B-207ENST00000490399 HOXD3P31249 432 aaPredicted RBP4.64□□□□□ -1.67
PRPF4B-207ENST00000490399 ABCD1P33897 745 aa4.64□□□□□ -1.67
PRPF4B-207ENST00000490399 KRT9P35527 623 aa4.64□□□□□ -1.67
PRPF4B-207ENST00000490399 RGS2P41220 211 aa4.64□□□□□ -1.67
PRPF4B-207ENST00000490399 CTCFP49711 727 aaPredicted RBP4.64□□□□□ -1.67
PRPF4B-207ENST00000490399 RNPS1Q15287 305 aaKnown RBP4.64□□□□□ -1.67
PRPF4B-207ENST00000490399 TXNDC8Q6A555 127 aa4.64□□□□□ -1.67
PRPF4B-207ENST00000490399 FBXO46Q6PJ61 603 aaPredicted RBP4.64□□□□□ -1.67
PRPF4B-207ENST00000490399 ATF7IPQ6VMQ6 1270 aa4.64□□□□□ -1.67
PRPF4B-207ENST00000490399 CCDC105Q8IYK2 499 aa4.64□□□□□ -1.67
PRPF4B-207ENST00000490399 MIB2Q96AX9 1013 aa4.64□□□□□ -1.67
PRPF4B-207ENST00000490399 MPP4Q96JB8 637 aa4.64□□□□□ -1.67
PRPF4B-207ENST00000490399 NR1H4Q96RI1 486 aaPredicted RBP4.64□□□□□ -1.67
PRPF4B-207ENST00000490399 IRAK4Q9NWZ3 460 aa4.64□□□□□ -1.67
PRPF4B-207ENST00000490399 PLK2Q9NYY3 685 aa4.64□□□□□ -1.67
PRPF4B-207ENST00000490399 PCDHA7Q9UN72 937 aa4.64□□□□□ -1.67
PRPF4B-207ENST00000490399 A4GNTQ9UNA3 340 aa4.64□□□□□ -1.67
PRPF4B-207ENST00000490399 FAM96BQ9Y3D0 163 aa4.64□□□□□ -1.67
PRPF4B-207ENST00000490399 DOCK7Q96N67 2140 aa4.63□□□□□ -1.67
PRPF4B-207ENST00000490399 A0A1W2PPH5 198 aa4.63□□□□□ -1.67
PRPF4B-207ENST00000490399 PROB1E7EW31 1015 aa4.63□□□□□ -1.67
PRPF4B-207ENST00000490399 ASAP2O43150 1006 aa4.63□□□□□ -1.67
PRPF4B-207ENST00000490399 TGFB1I1O43294 461 aa4.63□□□□□ -1.67
PRPF4B-207ENST00000490399 EPB41L2O43491 1005 aaKnown RBP4.63□□□□□ -1.67
PRPF4B-207ENST00000490399 SOX30O94993 753 aa4.63□□□□□ -1.67
PRPF4B-207ENST00000490399 RTN3O95197 1032 aaPredicted RBP4.63□□□□□ -1.67
PRPF4B-207ENST00000490399 MBD4O95243 580 aa4.63□□□□□ -1.67
PRPF4B-207ENST00000490399 ETFAP13804 333 aa4.63□□□□□ -1.67
PRPF4B-207ENST00000490399 ITGAXP20702 1163 aa4.63□□□□□ -1.67
PRPF4B-207ENST00000490399 TNFAIP3P21580 790 aa4.63□□□□□ -1.67
PRPF4B-207ENST00000490399 ITGB8P26012 769 aa4.63□□□□□ -1.67
PRPF4B-207ENST00000490399 ICAM3P32942 547 aa4.63□□□□□ -1.67
PRPF4B-207ENST00000490399 MLH1P40692 756 aa4.63□□□□□ -1.67
PRPF4B-207ENST00000490399 GNAQP50148 359 aa4.63□□□□□ -1.67
PRPF4B-207ENST00000490399 CCR9P51686 369 aa4.63□□□□□ -1.67
PRPF4B-207ENST00000490399 NUDT6P53370 316 aa4.63□□□□□ -1.67
PRPF4B-207ENST00000490399 FOXG1P55316 489 aaPredicted RBP4.63□□□□□ -1.67
PRPF4B-207ENST00000490399 NANOS2P60321 138 aaKnown RBP4.63□□□□□ -1.67
PRPF4B-207ENST00000490399 ITGADQ13349 1161 aa4.63□□□□□ -1.67
PRPF4B-207ENST00000490399 DCTN2Q13561 401 aaKnown RBP4.63□□□□□ -1.67
PRPF4B-207ENST00000490399 TSTQ16762 297 aaKnown RBP4.63□□□□□ -1.67
PRPF4B-207ENST00000490399 TYW3Q6IPR3 259 aaKnown RBP4.63□□□□□ -1.67
PRPF4B-207ENST00000490399 CPLX2Q6PUV4 134 aaKnown RBP4.63□□□□□ -1.67
PRPF4B-207ENST00000490399 SLC46A3Q7Z3Q1 461 aa4.63□□□□□ -1.67
PRPF4B-207ENST00000490399 FBXL14Q8N1E6 418 aa4.63□□□□□ -1.67
PRPF4B-207ENST00000490399 CADM4Q8NFZ8 388 aa4.63□□□□□ -1.67
PRPF4B-207ENST00000490399 METTL6Q8TCB7 284 aa4.63□□□□□ -1.67
PRPF4B-207ENST00000490399 NAP1L4Q99733 375 aaKnown RBP4.63□□□□□ -1.67
PRPF4B-207ENST00000490399 TKTL2Q9H0I9 626 aa4.63□□□□□ -1.67
PRPF4B-207ENST00000490399 DDX4Q9NQI0 724 aaKnown RBP4.63□□□□□ -1.67
PRPF4B-207ENST00000490399 CISD1Q9NZ45 108 aaKnown RBP4.63□□□□□ -1.67
PRPF4B-207ENST00000490399 OR6C3Q9NZP0 311 aa4.63□□□□□ -1.67
PRPF4B-207ENST00000490399 KDM3AQ9Y4C1 1321 aa4.63□□□□□ -1.67
PRPF4B-207ENST00000490399 A0A1B0GVM2 712 aa4.62□□□□□ -1.67
PRPF4B-207ENST00000490399 INSIG1O15503 277 aa4.62□□□□□ -1.67
PRPF4B-207ENST00000490399 MT-CYBP00156 380 aaPredicted RBP4.62□□□□□ -1.67
PRPF4B-207ENST00000490399 TFP02787 698 aa4.62□□□□□ -1.67
PRPF4B-207ENST00000490399 ACAA1P09110 424 aaPredicted RBP4.62□□□□□ -1.67
PRPF4B-207ENST00000490399 MYF6P23409 242 aa4.62□□□□□ -1.67
PRPF4B-207ENST00000490399 SHMT1P34896 483 aa4.62□□□□□ -1.67
PRPF4B-207ENST00000490399 MXI1P50539 228 aa4.62□□□□□ -1.67
PRPF4B-207ENST00000490399 KRTAP10-9P60411 292 aa4.62□□□□□ -1.67
PRPF4B-207ENST00000490399 ADORA2A-AS1P86434 159 aa4.62□□□□□ -1.67
PRPF4B-207ENST00000490399 CRYZQ08257 329 aaKnown RBP4.62□□□□□ -1.67
PRPF4B-207ENST00000490399 SHBQ15464 509 aa4.62□□□□□ -1.67
PRPF4B-207ENST00000490399 HIST2H2ACQ16777 129 aaPredicted RBP4.62□□□□□ -1.67
PRPF4B-207ENST00000490399 ALG11Q2TAA5 492 aa4.62□□□□□ -1.67
PRPF4B-207ENST00000490399 COL28A1Q2UY09 1125 aa4.62□□□□□ -1.67
PRPF4B-207ENST00000490399 SGO1Q5FBB7 561 aa4.62□□□□□ -1.67
PRPF4B-207ENST00000490399 LCTLQ6UWM7 567 aa4.62□□□□□ -1.67
PRPF4B-207ENST00000490399 FJX1Q86VR8 437 aa4.62□□□□□ -1.67
PRPF4B-207ENST00000490399 SFTPA2Q8IWL1 248 aa4.62□□□□□ -1.67
PRPF4B-207ENST00000490399 SLC35F3Q8IY50 421 aa4.62□□□□□ -1.67
PRPF4B-207ENST00000490399 SAMD14Q8IZD0 417 aaPredicted RBP4.62□□□□□ -1.67
PRPF4B-207ENST00000490399 ZCCHC9Q8N567 271 aaKnown RBP4.62□□□□□ -1.67
PRPF4B-207ENST00000490399 OR14A16Q8NHC5 309 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms