RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 GPR34Q9UPC5 381 aa7.24□□□□□ -1.25
PDLIM1-203ENST00000490391 SLC5A6Q9Y289 635 aa7.24□□□□□ -1.25
PDLIM1-203ENST00000490391 RNF114Q9Y508 228 aa7.24□□□□□ -1.25
PDLIM1-203ENST00000490391 FADS3Q9Y5Q0 445 aa7.24□□□□□ -1.25
PDLIM1-203ENST00000490391 IGHV5-10-1A0A0J9YXX1 117 aa7.23□□□□□ -1.25
PDLIM1-203ENST00000490391 B4GAT1O43505 415 aa7.23□□□□□ -1.25
PDLIM1-203ENST00000490391 RFPL1O75677 317 aa7.23□□□□□ -1.25
PDLIM1-203ENST00000490391 CLSTN1O94985 981 aa7.23□□□□□ -1.25
PDLIM1-203ENST00000490391 CPNE6O95741 557 aa7.23□□□□□ -1.25
PDLIM1-203ENST00000490391 RPN1P04843 607 aaKnown RBP7.23□□□□□ -1.25
PDLIM1-203ENST00000490391 TCN2P20062 427 aa7.23□□□□□ -1.25
PDLIM1-203ENST00000490391 F8A1P23610 371 aa7.23□□□□□ -1.25
PDLIM1-203ENST00000490391 GJB2P29033 226 aa7.23□□□□□ -1.25
PDLIM1-203ENST00000490391 CHRNA3P32297 505 aa7.23□□□□□ -1.25
PDLIM1-203ENST00000490391 IGFALSP35858 605 aa7.23□□□□□ -1.25
PDLIM1-203ENST00000490391 HK3P52790 923 aa7.23□□□□□ -1.25
PDLIM1-203ENST00000490391 THOP1P52888 689 aa7.23□□□□□ -1.25
PDLIM1-203ENST00000490391 AP3M2P53677 418 aa7.23□□□□□ -1.25
PDLIM1-203ENST00000490391 PMS2P54278 862 aa7.23□□□□□ -1.25
PDLIM1-203ENST00000490391 TBX4P57082 545 aa7.23□□□□□ -1.25
PDLIM1-203ENST00000490391 B4GALNT1Q00973 533 aa7.23□□□□□ -1.25
PDLIM1-203ENST00000490391 MC1RQ01726 317 aa7.23□□□□□ -1.25
PDLIM1-203ENST00000490391 CCDC15Q0P6D6 951 aa7.23□□□□□ -1.25
PDLIM1-203ENST00000490391 ADIGQ0VDE8 80 aa7.23□□□□□ -1.25
PDLIM1-203ENST00000490391 ELOCQ15369 112 aa7.23□□□□□ -1.25
PDLIM1-203ENST00000490391 TCEA2Q15560 299 aa7.23□□□□□ -1.25
PDLIM1-203ENST00000490391 MAP9Q49MG5 647 aa7.23□□□□□ -1.25
PDLIM1-203ENST00000490391 ACCSLQ4AC99 568 aa7.23□□□□□ -1.25
PDLIM1-203ENST00000490391 FAXCQ5TGI0 409 aa7.23□□□□□ -1.25
PDLIM1-203ENST00000490391 SAMD5Q5TGI4 173 aa7.23□□□□□ -1.25
PDLIM1-203ENST00000490391 C16orf46Q6P387 395 aa7.23□□□□□ -1.25
PDLIM1-203ENST00000490391 OGFOD3Q6PK18 319 aa7.23□□□□□ -1.25
PDLIM1-203ENST00000490391 TP53INP2Q8IXH6 220 aa7.23□□□□□ -1.25
PDLIM1-203ENST00000490391 NLGN4XQ8N0W4 816 aa7.23□□□□□ -1.25
PDLIM1-203ENST00000490391 BMPERQ8N8U9 685 aa7.23□□□□□ -1.25
PDLIM1-203ENST00000490391 CHST14Q8NCH0 376 aa7.23□□□□□ -1.25
PDLIM1-203ENST00000490391 NLGN4YQ8NFZ3 816 aaPredicted RBP7.23□□□□□ -1.25
PDLIM1-203ENST00000490391 OR52K2Q8NGK3 314 aa7.23□□□□□ -1.25
PDLIM1-203ENST00000490391 SCG3Q8WXD2 468 aaKnown RBP7.23□□□□□ -1.25
PDLIM1-203ENST00000490391 ASB12Q8WXK4 309 aa7.23□□□□□ -1.25
PDLIM1-203ENST00000490391 TAF4BQ92750 862 aa7.23□□□□□ -1.25
PDLIM1-203ENST00000490391 KIAA1143Q96AT1 154 aaPredicted RBP7.23□□□□□ -1.25
PDLIM1-203ENST00000490391 CENPTQ96BT3 561 aa7.23□□□□□ -1.25
PDLIM1-203ENST00000490391 SLC39A13Q96H72 371 aa7.23□□□□□ -1.25
PDLIM1-203ENST00000490391 HAPLN3Q96S86 360 aa7.23□□□□□ -1.25
PDLIM1-203ENST00000490391 NUDT22Q9BRQ3 303 aa7.23□□□□□ -1.25
PDLIM1-203ENST00000490391 EFHD1Q9BUP0 239 aa7.23□□□□□ -1.25
PDLIM1-203ENST00000490391 ASPSCR1Q9BZE9 553 aa7.23□□□□□ -1.25
PDLIM1-203ENST00000490391 EDEM3Q9BZQ6 932 aa7.23□□□□□ -1.25
PDLIM1-203ENST00000490391 ETNK1Q9HBU6 452 aa7.23□□□□□ -1.25
PDLIM1-203ENST00000490391 APOBEC3GQ9HC16 384 aaKnown RBP7.23□□□□□ -1.25
PDLIM1-203ENST00000490391 PANK4Q9NVE7 773 aa7.23□□□□□ -1.25
PDLIM1-203ENST00000490391 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.23□□□□□ -1.25
PDLIM1-203ENST00000490391 AKAP7Q9P0M2 348 aaPredicted RBP7.23□□□□□ -1.25
PDLIM1-203ENST00000490391 OR51B4Q9Y5P0 310 aa7.23□□□□□ -1.25
PDLIM1-203ENST00000490391 MRPS18BQ9Y676 258 aaKnown RBP7.23□□□□□ -1.25
PDLIM1-203ENST00000490391 ANK2Q01484 3957 aa7.22□□□□□ -1.25
PDLIM1-203ENST00000490391 IGLON5A6NGN9 336 aa7.22□□□□□ -1.25
PDLIM1-203ENST00000490391 B4E171 279 aa7.22□□□□□ -1.25
PDLIM1-203ENST00000490391 M0QYT0 321 aa7.22□□□□□ -1.25
PDLIM1-203ENST00000490391 EIF3DO15371 548 aaKnown RBP eCLIP7.22□□□□□ -1.25
PDLIM1-203ENST00000490391 AP1G1O43747 822 aa7.22□□□□□ -1.25
PDLIM1-203ENST00000490391 DNAJB5O75953 348 aa7.22□□□□□ -1.25
PDLIM1-203ENST00000490391 CBX6O95503 412 aa7.22□□□□□ -1.25
PDLIM1-203ENST00000490391 MT-CO1P00395 513 aa7.22□□□□□ -1.25
PDLIM1-203ENST00000490391 PRNPP04156 253 aa7.22□□□□□ -1.25
PDLIM1-203ENST00000490391 ALPIP09923 528 aa7.22□□□□□ -1.25
PDLIM1-203ENST00000490391 SRCP12931 536 aa7.22□□□□□ -1.25
PDLIM1-203ENST00000490391 ADRB3P13945 408 aa7.22□□□□□ -1.25
PDLIM1-203ENST00000490391 CD58P19256 250 aa7.22□□□□□ -1.25
PDLIM1-203ENST00000490391 TRIM21P19474 475 aaKnown RBP7.22□□□□□ -1.25
PDLIM1-203ENST00000490391 MAP4P27816 1152 aaKnown RBP7.22□□□□□ -1.25
PDLIM1-203ENST00000490391 TSPAN7P41732 249 aa7.22□□□□□ -1.25
PDLIM1-203ENST00000490391 LEPRP48357 1165 aaKnown RBP7.22□□□□□ -1.25
PDLIM1-203ENST00000490391 COPB1P53618 953 aaKnown RBP7.22□□□□□ -1.25
PDLIM1-203ENST00000490391 DAOAP59103 153 aa7.22□□□□□ -1.25
PDLIM1-203ENST00000490391 YPEL5P62699 121 aa7.22□□□□□ -1.25
PDLIM1-203ENST00000490391 DLG4P78352 724 aa7.22□□□□□ -1.25
PDLIM1-203ENST00000490391 IRX6P78412 446 aaPredicted RBP7.22□□□□□ -1.25
PDLIM1-203ENST00000490391 PPARDQ03181 441 aa7.22□□□□□ -1.25
PDLIM1-203ENST00000490391 ABHD18Q0P651 414 aa7.22□□□□□ -1.25
PDLIM1-203ENST00000490391 HLTFQ14527 1009 aaKnown RBP eCLIP7.22□□□□□ -1.25
PDLIM1-203ENST00000490391 ALG11Q2TAA5 492 aa7.22□□□□□ -1.25
PDLIM1-203ENST00000490391 ANKS6Q68DC2 871 aa7.22□□□□□ -1.25
PDLIM1-203ENST00000490391 KCTD16Q68DU8 428 aa7.22□□□□□ -1.25
PDLIM1-203ENST00000490391 ARHGAP17Q68EM7 881 aa7.22□□□□□ -1.25
PDLIM1-203ENST00000490391 SV2BQ7L1I2 683 aa7.22□□□□□ -1.25
PDLIM1-203ENST00000490391 CIR1Q86X95 450 aaPredicted RBP7.22□□□□□ -1.25
PDLIM1-203ENST00000490391 C12orf56Q8IXR9 622 aa7.22□□□□□ -1.25
PDLIM1-203ENST00000490391 LGI2Q8N0V4 545 aa7.22□□□□□ -1.25
PDLIM1-203ENST00000490391 CCAR2Q8N163 923 aaKnown RBP7.22□□□□□ -1.25
PDLIM1-203ENST00000490391 SCML4Q8N228 414 aa7.22□□□□□ -1.25
PDLIM1-203ENST00000490391 ANKRD52Q8NB46 1076 aa7.22□□□□□ -1.25
PDLIM1-203ENST00000490391 SLC4A11Q8NBS3 891 aa7.22□□□□□ -1.25
PDLIM1-203ENST00000490391 ZNF507Q8TCN5 953 aa7.22□□□□□ -1.25
PDLIM1-203ENST00000490391 KCTD13Q8WZ19 329 aa7.22□□□□□ -1.25
PDLIM1-203ENST00000490391 RTP4Q96DX8 246 aa7.22□□□□□ -1.25
PDLIM1-203ENST00000490391 FEM1CQ96JP0 617 aa7.22□□□□□ -1.25
PDLIM1-203ENST00000490391 CCDC74BQ96LY2 380 aa7.22□□□□□ -1.25
PDLIM1-203ENST00000490391 DDX50Q9BQ39 737 aaKnown RBP7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 692.1 ms