RNA–Protein interactions for RNA: ENST00000490127.5

RBM3-209, Transcript of RNA binding motif protein 3, human

TSL 5

Gene RBM3, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM3-209	ENST00000490127	KLC2	Q9H0B6	622 aa		11.45	□□□□□ -0.58
RBM3-209	ENST00000490127	ABCG4	Q9H172	646 aa		11.45	□□□□□ -0.58
RBM3-209	ENST00000490127	ZWILCH	Q9H900	591 aa		11.45	□□□□□ -0.58
RBM3-209	ENST00000490127	PDF	Q9HBH1	243 aa		11.45	□□□□□ -0.58
RBM3-209	ENST00000490127	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	11.45	□□□□□ -0.58
RBM3-209	ENST00000490127	EVA1B	Q9NVM1	165 aa		11.45	□□□□□ -0.58
RBM3-209	ENST00000490127	UCKL1	Q9NWZ5	548 aa		11.45	□□□□□ -0.58
RBM3-209	ENST00000490127	HECA	Q9UBI9	543 aa	Predicted RBP	11.45	□□□□□ -0.58
RBM3-209	ENST00000490127	PCDHB1	Q9Y5F3	818 aa		11.45	□□□□□ -0.58
RBM3-209	ENST00000490127	TDRD6	O60522	2096 aa	Known RBP	11.44	□□□□□ -0.58
RBM3-209	ENST00000490127	NEMP2	A6NFY4	417 aa		11.44	□□□□□ -0.58
RBM3-209	ENST00000490127	ARHGAP42	A6NI28	874 aa		11.44	□□□□□ -0.58
RBM3-209	ENST00000490127		H3BRJ5	948 aa		11.44	□□□□□ -0.58
RBM3-209	ENST00000490127	PIAS2	O75928	621 aa		11.44	□□□□□ -0.58
RBM3-209	ENST00000490127	PCDH8	O95206	1070 aa		11.44	□□□□□ -0.58
RBM3-209	ENST00000490127	CKMT1A	P12532	417 aa		11.44	□□□□□ -0.58
RBM3-209	ENST00000490127	ADRB3	P13945	408 aa		11.44	□□□□□ -0.58
RBM3-209	ENST00000490127	HNRNPA2B1	P22626	353 aa	Known RBP	11.44	□□□□□ -0.58
RBM3-209	ENST00000490127	ARL4A	P40617	200 aa		11.44	□□□□□ -0.58
RBM3-209	ENST00000490127	HCAR3	P49019	387 aa		11.44	□□□□□ -0.58
RBM3-209	ENST00000490127	UCN	P55089	124 aa		11.44	□□□□□ -0.58
RBM3-209	ENST00000490127	SLC25A11	Q02978	314 aa	Known RBP	11.44	□□□□□ -0.58
RBM3-209	ENST00000490127	DPYS	Q14117	519 aa		11.44	□□□□□ -0.58
RBM3-209	ENST00000490127	TSR1	Q2NL82	804 aa	Known RBP	11.44	□□□□□ -0.58
RBM3-209	ENST00000490127	ASTE1	Q2TB18	679 aa	Predicted RBP	11.44	□□□□□ -0.58
RBM3-209	ENST00000490127	ZNF284	Q2VY69	593 aa		11.44	□□□□□ -0.58
RBM3-209	ENST00000490127	BOLA3	Q53S33	107 aa		11.44	□□□□□ -0.58
RBM3-209	ENST00000490127	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	11.44	□□□□□ -0.58
RBM3-209	ENST00000490127	CDCP2	Q5VXM1	449 aa		11.44	□□□□□ -0.58
RBM3-209	ENST00000490127	CNGA4	Q8IV77	575 aa		11.44	□□□□□ -0.58
RBM3-209	ENST00000490127	ARHGAP12	Q8IWW6	846 aa		11.44	□□□□□ -0.58
RBM3-209	ENST00000490127	NPW	Q8N729	165 aa		11.44	□□□□□ -0.58
RBM3-209	ENST00000490127	OR13H1	Q8NG92	308 aa		11.44	□□□□□ -0.58
RBM3-209	ENST00000490127	FAM174A	Q8TBP5	190 aa		11.44	□□□□□ -0.58
RBM3-209	ENST00000490127	TEKT4	Q8WW24	435 aa		11.44	□□□□□ -0.58
RBM3-209	ENST00000490127	HSPH1	Q92598	858 aa		11.44	□□□□□ -0.58
RBM3-209	ENST00000490127	COL26A1	Q96A83	441 aa		11.44	□□□□□ -0.58
RBM3-209	ENST00000490127	OSBPL1A	Q9BXW6	950 aa		11.44	□□□□□ -0.58
RBM3-209	ENST00000490127	PACSIN1	Q9BY11	444 aa		11.44	□□□□□ -0.58
RBM3-209	ENST00000490127	CWC15	Q9P013	229 aa	Known RBP	11.44	□□□□□ -0.58
RBM3-209	ENST00000490127	CTTNBP2NL	Q9P2B4	639 aa		11.44	□□□□□ -0.58
RBM3-209	ENST00000490127	UVRAG	Q9P2Y5	699 aa		11.44	□□□□□ -0.58
RBM3-209	ENST00000490127	UBA2	Q9UBT2	640 aa	Predicted RBP	11.44	□□□□□ -0.58
RBM3-209	ENST00000490127	ERVH48-1	M5A8F1	160 aa		11.43	□□□□□ -0.58
RBM3-209	ENST00000490127	MYO1F	O00160	1098 aa		11.43	□□□□□ -0.58
RBM3-209	ENST00000490127	KRIT1	O00522	736 aa		11.43	□□□□□ -0.58
RBM3-209	ENST00000490127	AKR1B10	O60218	316 aa		11.43	□□□□□ -0.58
RBM3-209	ENST00000490127	PRAMEF11	O60813	436 aa		11.43	□□□□□ -0.58
RBM3-209	ENST00000490127	USP12	O75317	370 aa		11.43	□□□□□ -0.58
RBM3-209	ENST00000490127	MPO	P05164	745 aa		11.43	□□□□□ -0.58
RBM3-209	ENST00000490127	UGT2B4	P06133	528 aa		11.43	□□□□□ -0.58
RBM3-209	ENST00000490127	H2AFZ	P0C0S5	128 aa		11.43	□□□□□ -0.58
RBM3-209	ENST00000490127	RARA	P10276	462 aa		11.43	□□□□□ -0.58
RBM3-209	ENST00000490127	GK	P32189	559 aa		11.43	□□□□□ -0.58
RBM3-209	ENST00000490127	LSS	P48449	732 aa		11.43	□□□□□ -0.58
RBM3-209	ENST00000490127	ADK	P55263	362 aa	Known RBP	11.43	□□□□□ -0.58
RBM3-209	ENST00000490127	TMPRSS3	P57727	454 aa		11.43	□□□□□ -0.58
RBM3-209	ENST00000490127	CLDN2	P57739	230 aa		11.43	□□□□□ -0.58
RBM3-209	ENST00000490127	GABRE	P78334	506 aa		11.43	□□□□□ -0.58
RBM3-209	ENST00000490127	RHD	Q02161	417 aa		11.43	□□□□□ -0.58
RBM3-209	ENST00000490127	MYLK3	Q32MK0	819 aa		11.43	□□□□□ -0.58
RBM3-209	ENST00000490127	AFMID	Q63HM1	303 aa		11.43	□□□□□ -0.58
RBM3-209	ENST00000490127	TXNRD3NB	Q6F5E7	133 aa		11.43	□□□□□ -0.58
RBM3-209	ENST00000490127		Q6ZSR6	202 aa		11.43	□□□□□ -0.58
RBM3-209	ENST00000490127	H2AFV	Q71UI9	128 aa		11.43	□□□□□ -0.58
RBM3-209	ENST00000490127	DCP2	Q8IU60	420 aa	Known RBP	11.43	□□□□□ -0.58
RBM3-209	ENST00000490127	IFT43	Q96FT9	208 aa		11.43	□□□□□ -0.58
RBM3-209	ENST00000490127	APOLD1	Q96LR9	279 aa		11.43	□□□□□ -0.58
RBM3-209	ENST00000490127	DUSP23	Q9BVJ7	150 aa		11.43	□□□□□ -0.58
RBM3-209	ENST00000490127	TRIM5	Q9C035	493 aa		11.43	□□□□□ -0.58
RBM3-209	ENST00000490127	SLC39A8	Q9C0K1	460 aa		11.43	□□□□□ -0.58
RBM3-209	ENST00000490127	POLR1B	Q9H9Y6	1135 aa		11.43	□□□□□ -0.58
RBM3-209	ENST00000490127	SP110	Q9HB58	689 aa		11.43	□□□□□ -0.58
RBM3-209	ENST00000490127	USP29	Q9HBJ7	922 aa		11.43	□□□□□ -0.58
RBM3-209	ENST00000490127	FZD3	Q9NPG1	666 aa		11.43	□□□□□ -0.58
RBM3-209	ENST00000490127	NLGN3	Q9NZ94	848 aa		11.43	□□□□□ -0.58
RBM3-209	ENST00000490127	LHX3	Q9UBR4	397 aa		11.43	□□□□□ -0.58
RBM3-209	ENST00000490127	LCMT1	Q9UIC8	334 aa		11.43	□□□□□ -0.58
RBM3-209	ENST00000490127	HS3ST3A1	Q9Y663	406 aa		11.43	□□□□□ -0.58
RBM3-209	ENST00000490127	HELZ2	Q9BYK8	2649 aa	Known RBP	11.42	□□□□□ -0.58
RBM3-209	ENST00000490127	C16orf96	A6NNT2	1141 aa		11.42	□□□□□ -0.58
RBM3-209	ENST00000490127	AKR1B15	C9JRZ8	316 aa	Predicted RBP	11.42	□□□□□ -0.58
RBM3-209	ENST00000490127		J3KR12	359 aa		11.42	□□□□□ -0.58
RBM3-209	ENST00000490127	DFFA	O00273	331 aa		11.42	□□□□□ -0.58
RBM3-209	ENST00000490127	SCAMP1	O15126	338 aa		11.42	□□□□□ -0.58
RBM3-209	ENST00000490127	AP1G1	O43747	822 aa		11.42	□□□□□ -0.58
RBM3-209	ENST00000490127	CS	O75390	466 aa	Known RBP	11.42	□□□□□ -0.58
RBM3-209	ENST00000490127	DXO	O77932	396 aa	Known RBP	11.42	□□□□□ -0.58
RBM3-209	ENST00000490127	PROSC	O94903	275 aa		11.42	□□□□□ -0.58
RBM3-209	ENST00000490127	POP4	O95707	220 aa	Known RBP	11.42	□□□□□ -0.58
RBM3-209	ENST00000490127	GP1BA	P07359	652 aa		11.42	□□□□□ -0.58
RBM3-209	ENST00000490127	TMEM253	P0C7T8	217 aa		11.42	□□□□□ -0.58
RBM3-209	ENST00000490127	MYF5	P13349	255 aa		11.42	□□□□□ -0.58
RBM3-209	ENST00000490127	ABL2	P42684	1182 aa		11.42	□□□□□ -0.58
RBM3-209	ENST00000490127	SSR1	P43307	286 aa	Known RBP	11.42	□□□□□ -0.58
RBM3-209	ENST00000490127	PAPOLA	P51003	745 aa	Known RBP	11.42	□□□□□ -0.58
RBM3-209	ENST00000490127	ERVPABLB-1	P60509	514 aa		11.42	□□□□□ -0.58
RBM3-209	ENST00000490127	HNRNPK	P61978	463 aa	Known RBP eCLIP	11.42	□□□□□ -0.58
RBM3-209	ENST00000490127	RAD51	Q06609	339 aa		11.42	□□□□□ -0.58
RBM3-209	ENST00000490127	TBX2	Q13207	712 aa	Predicted RBP	11.42	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms