RNA–Protein interactions for RNA: ENST00000490056.5

SFXN5-220, Transcript of sideroflexin 5, humanhuman

TSL 1 (best)

Gene SFXN5, Length 906 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-220ENST00000490056 ZNF189O75820 626 aaPredicted RBP16.87■□□□□ 0.29
SFXN5-220ENST00000490056 PGLSO95336 258 aa16.87■□□□□ 0.29
SFXN5-220ENST00000490056 ZSCAN5DPP0CG00 497 aa16.87■□□□□ 0.29
SFXN5-220ENST00000490056 COILP38432 576 aaPredicted RBP16.87■□□□□ 0.29
SFXN5-220ENST00000490056 PAFAH1B1P43034 410 aa16.87■□□□□ 0.29
SFXN5-220ENST00000490056 PTPN5P54829 565 aa16.87■□□□□ 0.29
SFXN5-220ENST00000490056 ADPRHP54922 357 aa16.87■□□□□ 0.29
SFXN5-220ENST00000490056 SEMG2Q02383 582 aa16.87■□□□□ 0.29
SFXN5-220ENST00000490056 RPL6Q02878 288 aaKnown RBP16.87■□□□□ 0.29
SFXN5-220ENST00000490056 PTPRRQ15256 657 aa16.87■□□□□ 0.29
SFXN5-220ENST00000490056 PCSK7Q16549 785 aa16.87■□□□□ 0.29
SFXN5-220ENST00000490056 CYP1B1Q16678 543 aa16.87■□□□□ 0.29
SFXN5-220ENST00000490056 ARMC12Q5T9G4 340 aa16.87■□□□□ 0.29
SFXN5-220ENST00000490056 ITPRIPL1Q6GPH6 555 aa16.87■□□□□ 0.29
SFXN5-220ENST00000490056 BRAT1Q6PJG6 821 aa16.87■□□□□ 0.29
SFXN5-220ENST00000490056 ARHGEF18Q6ZSZ5 1173 aa16.87■□□□□ 0.29
SFXN5-220ENST00000490056 C12orf50Q8NA57 414 aaPredicted RBP16.87■□□□□ 0.29
SFXN5-220ENST00000490056 TADA1Q96BN2 335 aa16.87■□□□□ 0.29
SFXN5-220ENST00000490056 SMIM14Q96QK8 99 aa16.87■□□□□ 0.29
SFXN5-220ENST00000490056 KCNH6Q9H252 994 aa16.87■□□□□ 0.29
SFXN5-220ENST00000490056 C6orf106Q9H6K1 298 aaPredicted RBP16.87■□□□□ 0.29
SFXN5-220ENST00000490056 SGK2Q9HBY8 427 aa16.87■□□□□ 0.29
SFXN5-220ENST00000490056 GGT7Q9UJ14 662 aa16.87■□□□□ 0.29
SFXN5-220ENST00000490056 SDK1Q7Z5N4 2213 aa16.86■□□□□ 0.29
SFXN5-220ENST00000490056 MUC6Q6W4X9 2439 aa16.86■□□□□ 0.29
SFXN5-220ENST00000490056 TBC1D3DA0A087WVF3 549 aa16.86■□□□□ 0.29
SFXN5-220ENST00000490056 TBC1D3IA0A087WXS9 549 aa16.86■□□□□ 0.29
SFXN5-220ENST00000490056 TBC1D3EA0A087X179 549 aa16.86■□□□□ 0.29
SFXN5-220ENST00000490056 TBC1D3KA0A087X1G2 549 aa16.86■□□□□ 0.29
SFXN5-220ENST00000490056 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.86■□□□□ 0.29
SFXN5-220ENST00000490056 GOLGA6L10A0A0M3HER8 536 aa16.86■□□□□ 0.29
SFXN5-220ENST00000490056 TBC1D3FA6NER0 549 aaPredicted RBP16.86■□□□□ 0.29
SFXN5-220ENST00000490056 UPK3BL1B0FP48 263 aa16.86■□□□□ 0.29
SFXN5-220ENST00000490056 TBC1D3LB9A6J9 549 aa16.86■□□□□ 0.29
SFXN5-220ENST00000490056 UPK3BL2E5RIL1 263 aa16.86■□□□□ 0.29
SFXN5-220ENST00000490056 SLC7A4O43246 635 aa16.86■□□□□ 0.29
SFXN5-220ENST00000490056 SPINT1O43278 529 aa16.86■□□□□ 0.29
SFXN5-220ENST00000490056 PLRG1O43660 514 aaKnown RBP16.86■□□□□ 0.29
SFXN5-220ENST00000490056 FZD6O60353 706 aa16.86■□□□□ 0.29
SFXN5-220ENST00000490056 PHF2O75151 1096 aa16.86■□□□□ 0.29
SFXN5-220ENST00000490056 URI1O94763 535 aaPredicted RBP16.86■□□□□ 0.29
SFXN5-220ENST00000490056 METTL18O95568 372 aa16.86■□□□□ 0.29
SFXN5-220ENST00000490056 SEMA4FO95754 770 aa16.86■□□□□ 0.29
SFXN5-220ENST00000490056 CPP00450 1065 aa16.86■□□□□ 0.29
SFXN5-220ENST00000490056 PRLP01236 227 aa16.86■□□□□ 0.29
SFXN5-220ENST00000490056 TBC1D3HP0C7X1 549 aa16.86■□□□□ 0.29
SFXN5-220ENST00000490056 XPAP23025 273 aaPredicted RBP16.86■□□□□ 0.29
SFXN5-220ENST00000490056 CNR2P34972 360 aa16.86■□□□□ 0.29
SFXN5-220ENST00000490056 SIM2Q14190 667 aaPredicted RBP16.86■□□□□ 0.29
SFXN5-220ENST00000490056 UGP2Q16851 508 aa16.86■□□□□ 0.29
SFXN5-220ENST00000490056 FAXCQ5TGI0 409 aa16.86■□□□□ 0.29
SFXN5-220ENST00000490056 TBC1D3GQ6DHY5 549 aa16.86■□□□□ 0.29
SFXN5-220ENST00000490056 TBC1D3CQ6IPX1 549 aa16.86■□□□□ 0.29
SFXN5-220ENST00000490056 KDELC1Q6UW63 502 aa16.86■□□□□ 0.29
SFXN5-220ENST00000490056 SLC36A4Q6YBV0 504 aa16.86■□□□□ 0.29
SFXN5-220ENST00000490056 PRR23BQ6ZRT6 265 aa16.86■□□□□ 0.29
SFXN5-220ENST00000490056 GSTA5Q7RTV2 222 aa16.86■□□□□ 0.29
SFXN5-220ENST00000490056 TMEFF1Q8IYR6 380 aa16.86■□□□□ 0.29
SFXN5-220ENST00000490056 TBC1D3Q8IZP1 549 aaPredicted RBP16.86■□□□□ 0.29
SFXN5-220ENST00000490056 ATL2Q8NHH9 583 aa16.86■□□□□ 0.29
SFXN5-220ENST00000490056 HCAR2Q8TDS4 363 aa16.86■□□□□ 0.29
SFXN5-220ENST00000490056 MLPHQ9BV36 600 aaPredicted RBP16.86■□□□□ 0.29
SFXN5-220ENST00000490056 TDRD1Q9BXT4 1180 aaKnown RBP16.86■□□□□ 0.29
SFXN5-220ENST00000490056 DUSP15Q9H1R2 295 aaPredicted RBP16.86■□□□□ 0.29
SFXN5-220ENST00000490056 PCDH9Q9HC56 1237 aa16.86■□□□□ 0.29
SFXN5-220ENST00000490056 PCDH12Q9NPG4 1184 aa16.86■□□□□ 0.29
SFXN5-220ENST00000490056 FAM153AQ9UHL3 310 aa16.86■□□□□ 0.29
SFXN5-220ENST00000490056 HCN4Q9Y3Q4 1203 aa16.86■□□□□ 0.29
SFXN5-220ENST00000490056 FADS3Q9Y5Q0 445 aa16.86■□□□□ 0.29
SFXN5-220ENST00000490056 THADAQ6YHU6 1953 aa16.86■□□□□ 0.29
SFXN5-220ENST00000490056 LRRC72A6NJI9 287 aa16.85■□□□□ 0.29
SFXN5-220ENST00000490056 KIF2AO00139 706 aaPredicted RBP16.85■□□□□ 0.29
SFXN5-220ENST00000490056 TUBB4AP04350 444 aa16.85■□□□□ 0.29
SFXN5-220ENST00000490056 CTPS1P17812 591 aa16.85■□□□□ 0.29
SFXN5-220ENST00000490056 RPL22P35268 128 aaKnown RBP16.85■□□□□ 0.29
SFXN5-220ENST00000490056 WNT3AP56704 352 aa16.85■□□□□ 0.29
SFXN5-220ENST00000490056 CCDC15Q0P6D6 951 aa16.85■□□□□ 0.29
SFXN5-220ENST00000490056 TRIP13Q15645 432 aaPredicted RBP16.85■□□□□ 0.29
SFXN5-220ENST00000490056 LPAL2Q16609 132 aa16.85■□□□□ 0.29
SFXN5-220ENST00000490056 P3H1Q32P28 736 aa16.85■□□□□ 0.29
SFXN5-220ENST00000490056 PLK5Q496M5 336 aa16.85■□□□□ 0.29
SFXN5-220ENST00000490056 ZC3H14Q6PJT7 736 aaKnown RBP16.85■□□□□ 0.29
SFXN5-220ENST00000490056 CCDC137Q6PK04 289 aaKnown RBP16.85■□□□□ 0.29
SFXN5-220ENST00000490056 ARMCX6Q7L4S7 300 aa16.85■□□□□ 0.29
SFXN5-220ENST00000490056 SLC41A1Q8IVJ1 513 aa16.85■□□□□ 0.29
SFXN5-220ENST00000490056 CCDC89Q8N998 374 aa16.85■□□□□ 0.29
SFXN5-220ENST00000490056 OR2T34Q8NGX1 318 aa16.85■□□□□ 0.29
SFXN5-220ENST00000490056 PIH1D2Q8WWB5 315 aa16.85■□□□□ 0.29
SFXN5-220ENST00000490056 DDX47Q9H0S4 455 aaKnown RBP16.85■□□□□ 0.29
SFXN5-220ENST00000490056 RNF14Q9UBS8 474 aa16.85■□□□□ 0.29
SFXN5-220ENST00000490056 CEP192Q8TEP8 1941 aa16.84■□□□□ 0.29
SFXN5-220ENST00000490056 A8MX80 341 aa16.84■□□□□ 0.29
SFXN5-220ENST00000490056 AREL1O15033 823 aa16.84■□□□□ 0.29
SFXN5-220ENST00000490056 PCDH8O95206 1070 aa16.84■□□□□ 0.29
SFXN5-220ENST00000490056 CA4P22748 312 aa16.84■□□□□ 0.29
SFXN5-220ENST00000490056 PPP2CBP62714 309 aa16.84■□□□□ 0.29
SFXN5-220ENST00000490056 POLR2LP62875 67 aaKnown RBP16.84■□□□□ 0.29
SFXN5-220ENST00000490056 PPP2CAP67775 309 aa16.84■□□□□ 0.29
SFXN5-220ENST00000490056 FAM193AP78312 1265 aa16.84■□□□□ 0.29
SFXN5-220ENST00000490056 CDK18Q07002 472 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms