RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 CXorf51AA0A1B0GTR3 108 aa14.12□□□□□ -0.15
VARS-227ENST00000489979 FOXN3O00409 490 aaPredicted RBP14.12□□□□□ -0.15
VARS-227ENST00000489979 RASGRP1O95267 797 aa14.12□□□□□ -0.15
VARS-227ENST00000489979 FGFR1OPO95684 399 aaKnown RBP14.12□□□□□ -0.15
VARS-227ENST00000489979 TIMP2P16035 220 aa14.12□□□□□ -0.15
VARS-227ENST00000489979 WT1P19544 449 aaPredicted RBP14.12□□□□□ -0.15
VARS-227ENST00000489979 SCNN1AP37088 669 aa14.12□□□□□ -0.15
VARS-227ENST00000489979 ETFBP38117 255 aa14.12□□□□□ -0.15
VARS-227ENST00000489979 ETV5P41161 510 aa14.12□□□□□ -0.15
VARS-227ENST00000489979 GABRB2P47870 512 aa14.12□□□□□ -0.15
VARS-227ENST00000489979 PEX5P50542 639 aa14.12□□□□□ -0.15
VARS-227ENST00000489979 GEMIN4P57678 1058 aaKnown RBP14.12□□□□□ -0.15
VARS-227ENST00000489979 BNIPLQ7Z465 357 aa14.12□□□□□ -0.15
VARS-227ENST00000489979 XYLT1Q86Y38 959 aa14.12□□□□□ -0.15
VARS-227ENST00000489979 CCNJLQ8IV13 435 aa14.12□□□□□ -0.15
VARS-227ENST00000489979 ELOA2Q8IYF1 753 aaPredicted RBP14.12□□□□□ -0.15
VARS-227ENST00000489979 ZSCAN1Q8NBB4 408 aa14.12□□□□□ -0.15
VARS-227ENST00000489979 TMEM35BQ8NCS4 154 aa14.12□□□□□ -0.15
VARS-227ENST00000489979 OR6C4Q8NGE1 309 aa14.12□□□□□ -0.15
VARS-227ENST00000489979 HTR3CQ8WXA8 447 aa14.12□□□□□ -0.15
VARS-227ENST00000489979 USP7Q93009 1102 aa14.12□□□□□ -0.15
VARS-227ENST00000489979 CFAP57Q96MR6 1250 aa14.12□□□□□ -0.15
VARS-227ENST00000489979 PDCL3Q9H2J4 239 aa14.12□□□□□ -0.15
VARS-227ENST00000489979 FOXJ2Q9P0K8 574 aa14.12□□□□□ -0.15
VARS-227ENST00000489979 DNAJC12Q9UKB3 198 aa14.12□□□□□ -0.15
VARS-227ENST00000489979 HPCAL4Q9UM19 191 aa14.12□□□□□ -0.15
VARS-227ENST00000489979 COQ6Q9Y2Z9 468 aa14.12□□□□□ -0.15
VARS-227ENST00000489979 TMEM110-MUSTN1A8MSY1 372 aa14.11□□□□□ -0.15
VARS-227ENST00000489979 GOLGA8SH3BPF8 625 aa14.11□□□□□ -0.15
VARS-227ENST00000489979 PPFIA2O75334 1257 aa14.11□□□□□ -0.15
VARS-227ENST00000489979 CDH5P33151 784 aaPredicted RBP14.11□□□□□ -0.15
VARS-227ENST00000489979 MAPK10P53779 464 aa14.11□□□□□ -0.15
VARS-227ENST00000489979 SRP54P61011 504 aaKnown RBP14.11□□□□□ -0.15
VARS-227ENST00000489979 ZFP36L1Q07352 338 aaKnown RBP14.11□□□□□ -0.15
VARS-227ENST00000489979 NFATC4Q14934 902 aa14.11□□□□□ -0.15
VARS-227ENST00000489979 CLCA4Q14CN2 919 aa14.11□□□□□ -0.15
VARS-227ENST00000489979 LRRC14Q15048 493 aa14.11□□□□□ -0.15
VARS-227ENST00000489979 WSCD2Q2TBF2 565 aa14.11□□□□□ -0.15
VARS-227ENST00000489979 C2CD6Q53TS8 623 aa14.11□□□□□ -0.15
VARS-227ENST00000489979 RWDD4Q6NW29 188 aaKnown RBP14.11□□□□□ -0.15
VARS-227ENST00000489979 NLRP14Q86W24 1093 aa14.11□□□□□ -0.15
VARS-227ENST00000489979 LURAP1LQ8IV03 231 aa14.11□□□□□ -0.15
VARS-227ENST00000489979 NETO2Q8NC67 525 aa14.11□□□□□ -0.15
VARS-227ENST00000489979 GPR156Q8NFN8 814 aa14.11□□□□□ -0.15
VARS-227ENST00000489979 APOOQ9BUR5 198 aa14.11□□□□□ -0.15
VARS-227ENST00000489979 SLC25A18Q9H1K4 315 aa14.11□□□□□ -0.15
VARS-227ENST00000489979 SIX2Q9NPC8 291 aa14.11□□□□□ -0.15
VARS-227ENST00000489979 KLQ9UEF7 1012 aa14.11□□□□□ -0.15
VARS-227ENST00000489979 PCDHB11Q9Y5F2 797 aa14.11□□□□□ -0.15
VARS-227ENST00000489979 FLNCQ14315 2725 aa14.11□□□□□ -0.15
VARS-227ENST00000489979 ANKRD36A6QL64 1941 aa14.1□□□□□ -0.15
VARS-227ENST00000489979 C9orf172C9J069 976 aa14.1□□□□□ -0.15
VARS-227ENST00000489979 RHOQP17081 205 aa14.1□□□□□ -0.15
VARS-227ENST00000489979 HTR1BP28222 390 aa14.1□□□□□ -0.15
VARS-227ENST00000489979 MAPKAPK2P49137 400 aa14.1□□□□□ -0.15
VARS-227ENST00000489979 ATP11AP98196 1134 aa14.1□□□□□ -0.15
VARS-227ENST00000489979 TLE1Q04724 770 aa14.1□□□□□ -0.15
VARS-227ENST00000489979 RAD51Q06609 339 aa14.1□□□□□ -0.15
VARS-227ENST00000489979 TMEM52BQ4KMG9 183 aa14.1□□□□□ -0.15
VARS-227ENST00000489979 RAB6CQ53S08 254 aa14.1□□□□□ -0.15
VARS-227ENST00000489979 MANEALQ5VSG8 457 aa14.1□□□□□ -0.15
VARS-227ENST00000489979 KCTD16Q68DU8 428 aa14.1□□□□□ -0.15
VARS-227ENST00000489979 DTX1Q86Y01 620 aa14.1□□□□□ -0.15
VARS-227ENST00000489979 TMEM159Q96B96 161 aa14.1□□□□□ -0.15
VARS-227ENST00000489979 GDAP1L1Q96MZ0 367 aa14.1□□□□□ -0.15
VARS-227ENST00000489979 CMKLR1Q99788 373 aa14.1□□□□□ -0.15
VARS-227ENST00000489979 TTYH3Q9C0H2 523 aa14.1□□□□□ -0.15
VARS-227ENST00000489979 RAB6CQ9H0N0 254 aa14.1□□□□□ -0.15
VARS-227ENST00000489979 MAGEH1Q9H213 219 aa14.1□□□□□ -0.15
VARS-227ENST00000489979 GEMIN8Q9NWZ8 242 aaKnown RBP14.1□□□□□ -0.15
VARS-227ENST00000489979 OR12D3Q9UGF7 316 aa14.1□□□□□ -0.15
VARS-227ENST00000489979 TMEM59LQ9UK28 342 aa14.1□□□□□ -0.15
VARS-227ENST00000489979 APPL1Q9UKG1 709 aa14.1□□□□□ -0.15
VARS-227ENST00000489979 OR1A2Q9Y585 309 aa14.1□□□□□ -0.15
VARS-227ENST00000489979 RNF215Q9Y6U7 377 aa14.1□□□□□ -0.15
VARS-227ENST00000489979 RELNP78509 3460 aa14.1□□□□□ -0.15
VARS-227ENST00000489979 ARHGEF17Q96PE2 2063 aaPredicted RBP14.1□□□□□ -0.15
VARS-227ENST00000489979 A0A1W2PQC6 194 aa14.09□□□□□ -0.15
VARS-227ENST00000489979 GTPBP10A4D1E9 387 aaKnown RBP14.09□□□□□ -0.15
VARS-227ENST00000489979 BUB1O43683 1085 aa14.09□□□□□ -0.15
VARS-227ENST00000489979 KDELR3O43731 214 aa14.09□□□□□ -0.15
VARS-227ENST00000489979 RAMP2O60895 175 aa14.09□□□□□ -0.15
VARS-227ENST00000489979 TMCC1O94876 653 aa14.09□□□□□ -0.15
VARS-227ENST00000489979 IGSF6O95976 241 aa14.09□□□□□ -0.15
VARS-227ENST00000489979 TNFP01375 233 aa14.09□□□□□ -0.15
VARS-227ENST00000489979 GLB1P16278 677 aa14.09□□□□□ -0.15
VARS-227ENST00000489979 XPAP23025 273 aaPredicted RBP14.09□□□□□ -0.15
VARS-227ENST00000489979 BPIFB4P59827 614 aa14.09□□□□□ -0.15
VARS-227ENST00000489979 NRG1Q02297 640 aaPredicted RBP14.09□□□□□ -0.15
VARS-227ENST00000489979 INPP5AQ14642 412 aa14.09□□□□□ -0.15
VARS-227ENST00000489979 CERCAMQ5T4B2 595 aa14.09□□□□□ -0.15
VARS-227ENST00000489979 PHF19Q5T6S3 580 aa14.09□□□□□ -0.15
VARS-227ENST00000489979 TAF3Q5VWG9 929 aa14.09□□□□□ -0.15
VARS-227ENST00000489979 SMYD5Q6GMV2 418 aa14.09□□□□□ -0.15
VARS-227ENST00000489979 TMPRSS9Q7Z410 1059 aa14.09□□□□□ -0.15
VARS-227ENST00000489979 SPRED1Q7Z699 444 aa14.09□□□□□ -0.15
VARS-227ENST00000489979 ZNF354CQ86Y25 554 aa14.09□□□□□ -0.15
VARS-227ENST00000489979 SFTPA2Q8IWL1 248 aa14.09□□□□□ -0.15
VARS-227ENST00000489979 FAM71AQ8IYT1 594 aa14.09□□□□□ -0.15
VARS-227ENST00000489979 EMC1Q8N766 993 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms