RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 GPR27Q9NS67 375 aa11.42□□□□□ -0.58
NIPAL3-207ENST00000488155 CWC15Q9P013 229 aaKnown RBP11.42□□□□□ -0.58
NIPAL3-207ENST00000488155 TTC24A2A3L6 582 aaPredicted RBP11.41□□□□□ -0.58
NIPAL3-207ENST00000488155 CPED1A4D0V7 1026 aa11.41□□□□□ -0.58
NIPAL3-207ENST00000488155 A8MX80 341 aa11.41□□□□□ -0.58
NIPAL3-207ENST00000488155 H3BM21 787 aa11.41□□□□□ -0.58
NIPAL3-207ENST00000488155 MT-CO3P00414 261 aa11.41□□□□□ -0.58
NIPAL3-207ENST00000488155 CDK4P11802 303 aa11.41□□□□□ -0.58
NIPAL3-207ENST00000488155 NME1P15531 152 aaKnown RBP11.41□□□□□ -0.58
NIPAL3-207ENST00000488155 AMPD1P23109 780 aa11.41□□□□□ -0.58
NIPAL3-207ENST00000488155 IL1R2P27930 398 aa11.41□□□□□ -0.58
NIPAL3-207ENST00000488155 EIF4A3P38919 411 aaKnown RBP11.41□□□□□ -0.58
NIPAL3-207ENST00000488155 UBASH3AP57075 661 aa11.41□□□□□ -0.58
NIPAL3-207ENST00000488155 PFN3P60673 137 aa11.41□□□□□ -0.58
NIPAL3-207ENST00000488155 ILKQ13418 452 aa11.41□□□□□ -0.58
NIPAL3-207ENST00000488155 IRF4Q15306 451 aa11.41□□□□□ -0.58
NIPAL3-207ENST00000488155 NFKBIBQ15653 356 aa11.41□□□□□ -0.58
NIPAL3-207ENST00000488155 CDKN3Q16667 212 aa11.41□□□□□ -0.58
NIPAL3-207ENST00000488155 UGP2Q16851 508 aa11.41□□□□□ -0.58
NIPAL3-207ENST00000488155 FAXCQ5TGI0 409 aa11.41□□□□□ -0.58
NIPAL3-207ENST00000488155 CRTC1Q6UUV9 634 aa11.41□□□□□ -0.58
NIPAL3-207ENST00000488155 NYAP1Q6ZVC0 841 aa11.41□□□□□ -0.58
NIPAL3-207ENST00000488155 RD3Q7Z3Z2 195 aa11.41□□□□□ -0.58
NIPAL3-207ENST00000488155 TP53I13Q8NBR0 393 aaPredicted RBP11.41□□□□□ -0.58
NIPAL3-207ENST00000488155 DENND6BQ8NEG7 585 aa11.41□□□□□ -0.58
NIPAL3-207ENST00000488155 HSPH1Q92598 858 aa11.41□□□□□ -0.58
NIPAL3-207ENST00000488155 NXPE2Q96DL1 559 aa11.41□□□□□ -0.58
NIPAL3-207ENST00000488155 IFT43Q96FT9 208 aa11.41□□□□□ -0.58
NIPAL3-207ENST00000488155 CRELD1Q96HD1 420 aa11.41□□□□□ -0.58
NIPAL3-207ENST00000488155 CINPQ9BW66 212 aaPredicted RBP11.41□□□□□ -0.58
NIPAL3-207ENST00000488155 EDEM3Q9BZQ6 932 aa11.41□□□□□ -0.58
NIPAL3-207ENST00000488155 PCDH12Q9NPG4 1184 aa11.41□□□□□ -0.58
NIPAL3-207ENST00000488155 NLGN3Q9NZ94 848 aa11.41□□□□□ -0.58
NIPAL3-207ENST00000488155 DKK3Q9UBP4 350 aa11.41□□□□□ -0.58
NIPAL3-207ENST00000488155 PNMA8BQ9ULN7 279 aaPredicted RBP11.41□□□□□ -0.58
NIPAL3-207ENST00000488155 CLCA2Q9UQC9 943 aa11.41□□□□□ -0.58
NIPAL3-207ENST00000488155 PCDHB1Q9Y5F3 818 aa11.41□□□□□ -0.58
NIPAL3-207ENST00000488155 SCINQ9Y6U3 715 aa11.41□□□□□ -0.58
NIPAL3-207ENST00000488155 BPTFQ12830 3046 aa11.4□□□□□ -0.58
NIPAL3-207ENST00000488155 LY6G6EA0A0G2JKS1 128 aa11.4□□□□□ -0.58
NIPAL3-207ENST00000488155 AQP9O43315 295 aa11.4□□□□□ -0.58
NIPAL3-207ENST00000488155 LZTS3O60299 673 aaPredicted RBP11.4□□□□□ -0.58
NIPAL3-207ENST00000488155 CKMT1AP12532 417 aa11.4□□□□□ -0.58
NIPAL3-207ENST00000488155 C6P13671 934 aa11.4□□□□□ -0.58
NIPAL3-207ENST00000488155 HTR7P34969 479 aa11.4□□□□□ -0.58
NIPAL3-207ENST00000488155 SCNN1BP51168 640 aa11.4□□□□□ -0.58
NIPAL3-207ENST00000488155 ADKP55263 362 aaKnown RBP11.4□□□□□ -0.58
NIPAL3-207ENST00000488155 TPM4P67936 248 aa11.4□□□□□ -0.58
NIPAL3-207ENST00000488155 E2F1Q01094 437 aa11.4□□□□□ -0.58
NIPAL3-207ENST00000488155 ELP6Q0PNE2 266 aa11.4□□□□□ -0.58
NIPAL3-207ENST00000488155 WSCD2Q2TBF2 565 aa11.4□□□□□ -0.58
NIPAL3-207ENST00000488155 TMEM52BQ4KMG9 183 aa11.4□□□□□ -0.58
NIPAL3-207ENST00000488155 PRRT3Q5FWE3 981 aa11.4□□□□□ -0.58
NIPAL3-207ENST00000488155 HGSNATQ68CP4 663 aa11.4□□□□□ -0.58
NIPAL3-207ENST00000488155 TXNRD3NBQ6F5E7 133 aa11.4□□□□□ -0.58
NIPAL3-207ENST00000488155 ZSCAN30Q86W11 494 aa11.4□□□□□ -0.58
NIPAL3-207ENST00000488155 PHACTR4Q8IZ21 702 aa11.4□□□□□ -0.58
NIPAL3-207ENST00000488155 IFI44Q8TCB0 444 aa11.4□□□□□ -0.58
NIPAL3-207ENST00000488155 FNIP1Q8TF40 1166 aa11.4□□□□□ -0.58
NIPAL3-207ENST00000488155 ASB12Q8WXK4 309 aa11.4□□□□□ -0.58
NIPAL3-207ENST00000488155 TRIM11Q96F44 468 aa11.4□□□□□ -0.58
NIPAL3-207ENST00000488155 NSMCE3Q96MG7 304 aa11.4□□□□□ -0.58
NIPAL3-207ENST00000488155 IL12RB2Q99665 862 aa11.4□□□□□ -0.58
NIPAL3-207ENST00000488155 C1QTNF7Q9BXJ2 289 aa11.4□□□□□ -0.58
NIPAL3-207ENST00000488155 THAP2Q9H0W7 228 aa11.4□□□□□ -0.58
NIPAL3-207ENST00000488155 ABCG4Q9H172 646 aa11.4□□□□□ -0.58
NIPAL3-207ENST00000488155 ISCUQ9H1K1 167 aa11.4□□□□□ -0.58
NIPAL3-207ENST00000488155 MRPL47Q9HD33 250 aaKnown RBP11.4□□□□□ -0.58
NIPAL3-207ENST00000488155 ETNK2Q9NVF9 386 aa11.4□□□□□ -0.58
NIPAL3-207ENST00000488155 DONSONQ9NYP3 566 aa11.4□□□□□ -0.58
NIPAL3-207ENST00000488155 DKK4Q9UBT3 224 aa11.4□□□□□ -0.58
NIPAL3-207ENST00000488155 APOBEC3BQ9UH17 382 aaKnown RBP11.4□□□□□ -0.58
NIPAL3-207ENST00000488155 U3KQA8 63 aa11.4□□□□□ -0.58
NIPAL3-207ENST00000488155 NBEAQ8NFP9 2946 aa11.4□□□□□ -0.58
NIPAL3-207ENST00000488155 SCN8AQ9UQD0 1980 aa11.39□□□□□ -0.59
NIPAL3-207ENST00000488155 EIF3CLB5ME19 914 aaKnown RBP11.39□□□□□ -0.59
NIPAL3-207ENST00000488155 GOLGA6L19H0YKK7 550 aa11.39□□□□□ -0.59
NIPAL3-207ENST00000488155 H3BRJ5 948 aa11.39□□□□□ -0.59
NIPAL3-207ENST00000488155 RIOK3O14730 519 aaKnown RBP11.39□□□□□ -0.59
NIPAL3-207ENST00000488155 MUSKO15146 869 aa11.39□□□□□ -0.59
NIPAL3-207ENST00000488155 CASC3O15234 703 aaKnown RBP11.39□□□□□ -0.59
NIPAL3-207ENST00000488155 TLX3O43711 291 aaPredicted RBP11.39□□□□□ -0.59
NIPAL3-207ENST00000488155 OPA1O60313 960 aa11.39□□□□□ -0.59
NIPAL3-207ENST00000488155 GCATO75600 419 aa11.39□□□□□ -0.59
NIPAL3-207ENST00000488155 PCCBP05166 539 aa11.39□□□□□ -0.59
NIPAL3-207ENST00000488155 CELA2BP08218 269 aaPredicted RBP11.39□□□□□ -0.59
NIPAL3-207ENST00000488155 MYBL1P10243 752 aa11.39□□□□□ -0.59
NIPAL3-207ENST00000488155 RARAP10276 462 aa11.39□□□□□ -0.59
NIPAL3-207ENST00000488155 ITPKBP27987 946 aa11.39□□□□□ -0.59
NIPAL3-207ENST00000488155 GJC1P36383 396 aa11.39□□□□□ -0.59
NIPAL3-207ENST00000488155 ARL4AP40617 200 aa11.39□□□□□ -0.59
NIPAL3-207ENST00000488155 SSR1P43307 286 aaKnown RBP11.39□□□□□ -0.59
NIPAL3-207ENST00000488155 LIG3P49916 1009 aa11.39□□□□□ -0.59
NIPAL3-207ENST00000488155 IL10RBQ08334 325 aa11.39□□□□□ -0.59
NIPAL3-207ENST00000488155 SLC10A7Q0GE19 358 aa11.39□□□□□ -0.59
NIPAL3-207ENST00000488155 DPYSQ14117 519 aa11.39□□□□□ -0.59
NIPAL3-207ENST00000488155 PTK2BQ14289 1009 aa11.39□□□□□ -0.59
NIPAL3-207ENST00000488155 GRM3Q14832 879 aa11.39□□□□□ -0.59
NIPAL3-207ENST00000488155 LRRC14Q15048 493 aa11.39□□□□□ -0.59
NIPAL3-207ENST00000488155 AFMIDQ63HM1 303 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms