RNA–Protein interactions for RNA: ENST00000487476.5

NF1-211, Transcript of neurofibromin 1, humanhuman

TSL 1 (best) BASIC

Gene NF1, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-211ENST00000487476 TPSAB1Q15661 275 aa17.03■□□□□ 0.32
NF1-211ENST00000487476 FNBP1LQ5T0N5 605 aa17.03■□□□□ 0.32
NF1-211ENST00000487476 EMBQ6PCB8 327 aa17.03■□□□□ 0.32
NF1-211ENST00000487476 PCGF5Q86SE9 256 aa17.03■□□□□ 0.32
NF1-211ENST00000487476 CAND1Q86VP6 1230 aaKnown RBP17.03■□□□□ 0.32
NF1-211ENST00000487476 ZSWIM9Q86XI8 627 aa17.03■□□□□ 0.32
NF1-211ENST00000487476 OR52K1Q8NGK4 314 aa17.03■□□□□ 0.32
NF1-211ENST00000487476 SHDQ96IW2 340 aa17.03■□□□□ 0.32
NF1-211ENST00000487476 UHRF1Q96T88 793 aaPredicted RBP17.03■□□□□ 0.32
NF1-211ENST00000487476 TBL1YQ9BQ87 522 aa17.03■□□□□ 0.32
NF1-211ENST00000487476 FSD1LQ9BXM9 530 aa17.03■□□□□ 0.32
NF1-211ENST00000487476 TDRD1Q9BXT4 1180 aaKnown RBP17.03■□□□□ 0.32
NF1-211ENST00000487476 LRRC40Q9H9A6 602 aa17.03■□□□□ 0.32
NF1-211ENST00000487476 VPS45Q9NRW7 570 aa17.03■□□□□ 0.32
NF1-211ENST00000487476 STK25O00506 426 aa17.02■□□□□ 0.32
NF1-211ENST00000487476 SUN1O94901 812 aa17.02■□□□□ 0.32
NF1-211ENST00000487476 COL9A1P20849 921 aa17.02■□□□□ 0.32
NF1-211ENST00000487476 MRPS21P82921 87 aaKnown RBP17.02■□□□□ 0.32
NF1-211ENST00000487476 BCL2L1Q07817 233 aa17.02■□□□□ 0.32
NF1-211ENST00000487476 GALNT3Q14435 633 aa17.02■□□□□ 0.32
NF1-211ENST00000487476 FBXO43Q4G163 708 aa17.02■□□□□ 0.32
NF1-211ENST00000487476 MSS51Q4VC12 460 aa17.02■□□□□ 0.32
NF1-211ENST00000487476 DENND5AQ6IQ26 1287 aa17.02■□□□□ 0.32
NF1-211ENST00000487476 RANBP10Q6VN20 620 aa17.02■□□□□ 0.32
NF1-211ENST00000487476 HOOK3Q86VS8 718 aa17.02■□□□□ 0.32
NF1-211ENST00000487476 TRIB3Q96RU7 358 aa17.02■□□□□ 0.32
NF1-211ENST00000487476 GABRG3Q99928 467 aa17.02■□□□□ 0.32
NF1-211ENST00000487476 ATP13A3Q9H7F0 1226 aa17.02■□□□□ 0.32
NF1-211ENST00000487476 EIF2B3Q9NR50 452 aaKnown RBP17.02■□□□□ 0.32
NF1-211ENST00000487476 C2orf42Q9NWW7 574 aa17.02■□□□□ 0.32
NF1-211ENST00000487476 SUN2Q9UH99 717 aa17.02■□□□□ 0.32
NF1-211ENST00000487476 IL36AQ9UHA7 158 aa17.02■□□□□ 0.32
NF1-211ENST00000487476 SHOC2Q9UQ13 582 aa17.02■□□□□ 0.32
NF1-211ENST00000487476 PCDHB9Q9Y5E1 797 aa17.02■□□□□ 0.32
NF1-211ENST00000487476 LOC285095A0A1B0GVY8 99 aa17.01■□□□□ 0.31
NF1-211ENST00000487476 A0A1W2PQF6 199 aa17.01■□□□□ 0.31
NF1-211ENST00000487476 GOLGA8KD6RF30 607 aa17.01■□□□□ 0.31
NF1-211ENST00000487476 FAM153BP0C7A2 387 aa17.01■□□□□ 0.31
NF1-211ENST00000487476 TPH1P17752 444 aa17.01■□□□□ 0.31
NF1-211ENST00000487476 CDK18Q07002 472 aa17.01■□□□□ 0.31
NF1-211ENST00000487476 GAS6Q14393 721 aa17.01■□□□□ 0.31
NF1-211ENST00000487476 FAM153CQ494X1 144 aa17.01■□□□□ 0.31
NF1-211ENST00000487476 CACUL1Q86Y37 369 aa17.01■□□□□ 0.31
NF1-211ENST00000487476 KCNV2Q8TDN2 545 aa17.01■□□□□ 0.31
NF1-211ENST00000487476 CAVIN3Q969G5 261 aa17.01■□□□□ 0.31
NF1-211ENST00000487476 SERPINB12Q96P63 405 aa17.01■□□□□ 0.31
NF1-211ENST00000487476 CPEB1Q9BZB8 566 aaKnown RBP17.01■□□□□ 0.31
NF1-211ENST00000487476 NPC1O15118 1278 aa17.01■□□□□ 0.31
NF1-211ENST00000487476 PDGFBP01127 241 aaPredicted RBP17.01■□□□□ 0.31
NF1-211ENST00000487476 ATXN1LP0C7T5 689 aaKnown RBP17.01■□□□□ 0.31
NF1-211ENST00000487476 CUL1Q13616 776 aa17.01■□□□□ 0.31
NF1-211ENST00000487476 RALGPS1Q5JS13 557 aa17.01■□□□□ 0.31
NF1-211ENST00000487476 SIRPB2Q5JXA9 342 aa17.01■□□□□ 0.31
NF1-211ENST00000487476 HP1BP3Q5SSJ5 553 aaPredicted RBP17.01■□□□□ 0.31
NF1-211ENST00000487476 TMEM92Q6UXU6 159 aa17.01■□□□□ 0.31
NF1-211ENST00000487476 MMAAQ8IVH4 418 aaKnown RBP17.01■□□□□ 0.31
NF1-211ENST00000487476 AGGF1Q8N302 714 aaeCLIP17.01■□□□□ 0.31
NF1-211ENST00000487476 BBOF1Q8ND07 529 aa17.01■□□□□ 0.31
NF1-211ENST00000487476 FLCNQ8NFG4 579 aa17.01■□□□□ 0.31
NF1-211ENST00000487476 IFT43Q96FT9 208 aa17.01■□□□□ 0.31
NF1-211ENST00000487476 KLHL32Q96NJ5 620 aa17.01■□□□□ 0.31
NF1-211ENST00000487476 SLC6A17Q9H1V8 727 aa17.01■□□□□ 0.31
NF1-211ENST00000487476 SUV39H2Q9H5I1 410 aa17.01■□□□□ 0.31
NF1-211ENST00000487476 PPM1HQ9ULR3 514 aa17.01■□□□□ 0.31
NF1-211ENST00000487476 MRPS17Q9Y2R5 130 aaKnown RBP17.01■□□□□ 0.31
NF1-211ENST00000487476 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17■□□□□ 0.31
NF1-211ENST00000487476 ERI2A8K979 691 aaKnown RBP17■□□□□ 0.31
NF1-211ENST00000487476 ANKRD65E5RJM6 399 aa17■□□□□ 0.31
NF1-211ENST00000487476 HTRA2O43464 458 aaPredicted RBP17■□□□□ 0.31
NF1-211ENST00000487476 SYNCRIPO60506 623 aaKnown RBP17■□□□□ 0.31
NF1-211ENST00000487476 PRKCGP05129 697 aa17■□□□□ 0.31
NF1-211ENST00000487476 HOXB2P14652 356 aa17■□□□□ 0.31
NF1-211ENST00000487476 SLC8A1P32418 973 aa17■□□□□ 0.31
NF1-211ENST00000487476 CORO7P57737 925 aa17■□□□□ 0.31
NF1-211ENST00000487476 CAMK2GQ13555 558 aaPredicted RBP17■□□□□ 0.31
NF1-211ENST00000487476 ELAVL3Q14576 367 aaKnown RBP17■□□□□ 0.31
NF1-211ENST00000487476 SLC1A5Q15758 541 aa17■□□□□ 0.31
NF1-211ENST00000487476 LRRC73Q5JTD7 316 aa17■□□□□ 0.31
NF1-211ENST00000487476 DENND2CQ68D51 928 aa17■□□□□ 0.31
NF1-211ENST00000487476 SDE2Q6IQ49 451 aa17■□□□□ 0.31
NF1-211ENST00000487476 GDPD4Q6W3E5 623 aa17■□□□□ 0.31
NF1-211ENST00000487476 MCUQ8NE86 351 aa17■□□□□ 0.31
NF1-211ENST00000487476 OR8D1Q8WZ84 308 aa17■□□□□ 0.31
NF1-211ENST00000487476 CD248Q9HCU0 757 aa17■□□□□ 0.31
NF1-211ENST00000487476 A0A0U1RQS6 177 aa17■□□□□ 0.31
NF1-211ENST00000487476 PLK4O00444 970 aa17■□□□□ 0.31
NF1-211ENST00000487476 PSMD3O43242 534 aa17■□□□□ 0.31
NF1-211ENST00000487476 FZD6O60353 706 aa17■□□□□ 0.31
NF1-211ENST00000487476 PIRTP0C851 137 aa17■□□□□ 0.31
NF1-211ENST00000487476 SERPINA4P29622 427 aa17■□□□□ 0.31
NF1-211ENST00000487476 MAGEA9P43362 315 aa17■□□□□ 0.31
NF1-211ENST00000487476 MAPK8P45983 427 aa17■□□□□ 0.31
NF1-211ENST00000487476 SESN2P58004 480 aaPredicted RBP17■□□□□ 0.31
NF1-211ENST00000487476 CRADDP78560 199 aa17■□□□□ 0.31
NF1-211ENST00000487476 CDK16Q00536 496 aa17■□□□□ 0.31
NF1-211ENST00000487476 RAD51Q06609 339 aa17■□□□□ 0.31
NF1-211ENST00000487476 PPP1R21Q6ZMI0 780 aa17■□□□□ 0.31
NF1-211ENST00000487476 LPCAT1Q8NF37 534 aa17■□□□□ 0.31
NF1-211ENST00000487476 FEM1CQ96JP0 617 aa17■□□□□ 0.31
NF1-211ENST00000487476 PPP1R2P1Q96PQ5 205 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms