RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 ABCG4Q9H172 646 aa24.79■■□□□ 1.56
LIME1-206ENST00000487026 PCDH12Q9NPG4 1184 aa24.79■■□□□ 1.56
LIME1-206ENST00000487026 MYO1AQ9UBC5 1043 aa24.79■■□□□ 1.56
LIME1-206ENST00000487026 ARHGAP42A6NI28 874 aa24.78■■□□□ 1.56
LIME1-206ENST00000487026 DFFAO00273 331 aa24.78■■□□□ 1.56
LIME1-206ENST00000487026 RNF8O76064 485 aa24.78■■□□□ 1.56
LIME1-206ENST00000487026 ERCC2P18074 760 aa24.78■■□□□ 1.56
LIME1-206ENST00000487026 EIF2S3P41091 472 aaKnown RBP24.78■■□□□ 1.56
LIME1-206ENST00000487026 ZNF165P49910 485 aa24.78■■□□□ 1.56
LIME1-206ENST00000487026 ADKP55263 362 aaKnown RBP24.78■■□□□ 1.56
LIME1-206ENST00000487026 YPEL5P62699 121 aa24.78■■□□□ 1.56
LIME1-206ENST00000487026 KLHL30Q0D2K2 578 aa24.78■■□□□ 1.56
LIME1-206ENST00000487026 COL9A2Q14055 689 aaPredicted RBP24.78■■□□□ 1.56
LIME1-206ENST00000487026 IRF4Q15306 451 aa24.78■■□□□ 1.56
LIME1-206ENST00000487026 UGP2Q16851 508 aa24.78■■□□□ 1.56
LIME1-206ENST00000487026 SOWAHCQ53LP3 525 aaPredicted RBP24.78■■□□□ 1.56
LIME1-206ENST00000487026 PRRT3Q5FWE3 981 aa24.78■■□□□ 1.56
LIME1-206ENST00000487026 FAXCQ5TGI0 409 aa24.78■■□□□ 1.56
LIME1-206ENST00000487026 ARHGAP36Q6ZRI8 547 aa24.78■■□□□ 1.56
LIME1-206ENST00000487026 CYP4V2Q6ZWL3 525 aaPredicted RBP24.78■■□□□ 1.56
LIME1-206ENST00000487026 ZSWIM9Q86XI8 627 aa24.78■■□□□ 1.56
LIME1-206ENST00000487026 ARHGAP12Q8IWW6 846 aa24.78■■□□□ 1.56
LIME1-206ENST00000487026 PHACTR4Q8IZ21 702 aa24.78■■□□□ 1.56
LIME1-206ENST00000487026 TSEN2Q8NCE0 465 aaKnown RBP24.78■■□□□ 1.56
LIME1-206ENST00000487026 BTN2A2Q8WVV5 523 aa24.78■■□□□ 1.56
LIME1-206ENST00000487026 ZNF653Q96CK0 615 aa24.78■■□□□ 1.56
LIME1-206ENST00000487026 IL12RB2Q99665 862 aa24.78■■□□□ 1.56
LIME1-206ENST00000487026 C1QTNF7Q9BXJ2 289 aa24.78■■□□□ 1.56
LIME1-206ENST00000487026 USP29Q9HBJ7 922 aa24.78■■□□□ 1.56
LIME1-206ENST00000487026 DONSONQ9NYP3 566 aa24.78■■□□□ 1.56
LIME1-206ENST00000487026 SPASTQ9UBP0 616 aa24.78■■□□□ 1.56
LIME1-206ENST00000487026 APOBEC3BQ9UH17 382 aaKnown RBP24.78■■□□□ 1.56
LIME1-206ENST00000487026 A0A1B0GTH6 734 aa24.77■■□□□ 1.56
LIME1-206ENST00000487026 A0A1W2PQC6 194 aa24.77■■□□□ 1.56
LIME1-206ENST00000487026 PRPSAP2O60256 369 aa24.77■■□□□ 1.56
LIME1-206ENST00000487026 PALMO75781 387 aa24.77■■□□□ 1.56
LIME1-206ENST00000487026 GP1BAP07359 652 aa24.77■■□□□ 1.56
LIME1-206ENST00000487026 GZMAP12544 262 aa24.77■■□□□ 1.56
LIME1-206ENST00000487026 PRKCIP41743 596 aa24.77■■□□□ 1.56
LIME1-206ENST00000487026 ABCG1P45844 678 aa24.77■■□□□ 1.56
LIME1-206ENST00000487026 ELP6Q0PNE2 266 aa24.77■■□□□ 1.56
LIME1-206ENST00000487026 GUSBP11Q6P575 273 aa24.77■■□□□ 1.56
LIME1-206ENST00000487026 SRLQ86TD4 932 aa24.77■■□□□ 1.56
LIME1-206ENST00000487026 NPWQ8N729 165 aa24.77■■□□□ 1.56
LIME1-206ENST00000487026 MAPK15Q8TD08 544 aa24.77■■□□□ 1.56
LIME1-206ENST00000487026 HCAR2Q8TDS4 363 aa24.77■■□□□ 1.56
LIME1-206ENST00000487026 LOC400499M0QZD8 3231 aa24.76■■□□□ 1.55
LIME1-206ENST00000487026 ASXL3Q9C0F0 2248 aa24.76■■□□□ 1.55
LIME1-206ENST00000487026 TSPAN11A1L157 253 aa24.76■■□□□ 1.55
LIME1-206ENST00000487026 RIOK3O14730 519 aaKnown RBP24.76■■□□□ 1.55
LIME1-206ENST00000487026 LRCH4O75427 683 aa24.76■■□□□ 1.55
LIME1-206ENST00000487026 TGM2P21980 687 aa24.76■■□□□ 1.55
LIME1-206ENST00000487026 SUOXP51687 545 aa24.76■■□□□ 1.55
LIME1-206ENST00000487026 NR1I3Q14994 352 aa24.76■■□□□ 1.55
LIME1-206ENST00000487026 LRRC14Q15048 493 aa24.76■■□□□ 1.55
LIME1-206ENST00000487026 TCEA2Q15560 299 aa24.76■■□□□ 1.55
LIME1-206ENST00000487026 WSCD2Q2TBF2 565 aa24.76■■□□□ 1.55
LIME1-206ENST00000487026 CFAP58Q5T655 872 aa24.76■■□□□ 1.55
LIME1-206ENST00000487026 AFMIDQ63HM1 303 aa24.76■■□□□ 1.55
LIME1-206ENST00000487026 CRTC1Q6UUV9 634 aa24.76■■□□□ 1.55
LIME1-206ENST00000487026 NYAP1Q6ZVC0 841 aa24.76■■□□□ 1.55
LIME1-206ENST00000487026 EFL1Q7Z2Z2 1120 aaKnown RBP24.76■■□□□ 1.55
LIME1-206ENST00000487026 TP53INP2Q8IXH6 220 aa24.76■■□□□ 1.55
LIME1-206ENST00000487026 FGF11Q92914 225 aa24.76■■□□□ 1.55
LIME1-206ENST00000487026 ZNF641Q96N77 438 aaPredicted RBP24.76■■□□□ 1.55
LIME1-206ENST00000487026 LRRC61Q9BV99 259 aa24.76■■□□□ 1.55
LIME1-206ENST00000487026 SLC13A1Q9BZW2 595 aa24.76■■□□□ 1.55
LIME1-206ENST00000487026 CLPBQ9H078 707 aa24.76■■□□□ 1.55
LIME1-206ENST00000487026 EVA1BQ9NVM1 165 aa24.76■■□□□ 1.55
LIME1-206ENST00000487026 CWC15Q9P013 229 aaKnown RBP24.76■■□□□ 1.55
LIME1-206ENST00000487026 SALL4Q9UJQ4 1053 aa24.76■■□□□ 1.55
LIME1-206ENST00000487026 EIF3CLB5ME19 914 aaKnown RBP24.75■■□□□ 1.55
LIME1-206ENST00000487026 CSO75390 466 aaKnown RBP24.75■■□□□ 1.55
LIME1-206ENST00000487026 CELA2BP08218 269 aaPredicted RBP24.75■■□□□ 1.55
LIME1-206ENST00000487026 C6P13671 934 aa24.75■■□□□ 1.55
LIME1-206ENST00000487026 LIG3P49916 1009 aa24.75■■□□□ 1.55
LIME1-206ENST00000487026 GRM3Q14832 879 aa24.75■■□□□ 1.55
LIME1-206ENST00000487026 IQCB1Q15051 598 aa24.75■■□□□ 1.55
LIME1-206ENST00000487026 ERAP2Q6P179 960 aa24.75■■□□□ 1.55
LIME1-206ENST00000487026 MACC1Q6ZN28 852 aa24.75■■□□□ 1.55
LIME1-206ENST00000487026 LRRC69Q6ZNQ3 347 aa24.75■■□□□ 1.55
LIME1-206ENST00000487026 TSACCQ96A04 125 aaPredicted RBP24.75■■□□□ 1.55
LIME1-206ENST00000487026 DEPDC7Q96QD5 511 aa24.75■■□□□ 1.55
LIME1-206ENST00000487026 EIF3CQ99613 913 aaKnown RBP24.75■■□□□ 1.55
LIME1-206ENST00000487026 SP110Q9HB58 689 aa24.75■■□□□ 1.55
LIME1-206ENST00000487026 SMG1Q96Q15 3661 aaKnown RBP24.74■■□□□ 1.55
LIME1-206ENST00000487026 TPP1O14773 563 aa24.74■■□□□ 1.55
LIME1-206ENST00000487026 MUSKO15146 869 aa24.74■■□□□ 1.55
LIME1-206ENST00000487026 YY2O15391 372 aa24.74■■□□□ 1.55
LIME1-206ENST00000487026 USP12O75317 370 aa24.74■■□□□ 1.55
LIME1-206ENST00000487026 SERPINC1P01008 464 aa24.74■■□□□ 1.55
LIME1-206ENST00000487026 MPOP05164 745 aa24.74■■□□□ 1.55
LIME1-206ENST00000487026 TSHRP16473 764 aa24.74■■□□□ 1.55
LIME1-206ENST00000487026 PPARDQ03181 441 aa24.74■■□□□ 1.55
LIME1-206ENST00000487026 INPP5AQ14642 412 aa24.74■■□□□ 1.55
LIME1-206ENST00000487026 BRAT1Q6PJG6 821 aa24.74■■□□□ 1.55
LIME1-206ENST00000487026 HID1Q8IV36 788 aa24.74■■□□□ 1.55
LIME1-206ENST00000487026 FNIP1Q8TF40 1166 aa24.74■■□□□ 1.55
LIME1-206ENST00000487026 NSMCE3Q96MG7 304 aa24.74■■□□□ 1.55
LIME1-206ENST00000487026 BBC3Q96PG8 261 aaPredicted RBP24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms