RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 LRRC57Q8N9N7 239 aa18.37■□□□□ 0.53
COL1A1-207ENST00000486572 MFSD2AQ8NA29 543 aa18.37■□□□□ 0.53
COL1A1-207ENST00000486572 TMEM145Q8NBT3 493 aa18.37■□□□□ 0.53
COL1A1-207ENST00000486572 CCNYQ8ND76 341 aa18.37■□□□□ 0.53
COL1A1-207ENST00000486572 EXD1Q8NHP7 514 aa18.37■□□□□ 0.53
COL1A1-207ENST00000486572 KRT35Q92764 455 aa18.37■□□□□ 0.53
COL1A1-207ENST00000486572 ECHDC3Q96DC8 303 aa18.37■□□□□ 0.53
COL1A1-207ENST00000486572 RBM41Q96IZ5 413 aaKnown RBP18.37■□□□□ 0.53
COL1A1-207ENST00000486572 MYOCQ99972 504 aa18.37■□□□□ 0.53
COL1A1-207ENST00000486572 SLC17A9Q9BYT1 436 aa18.37■□□□□ 0.53
COL1A1-207ENST00000486572 GRPEL1Q9HAV7 217 aa18.37■□□□□ 0.53
COL1A1-207ENST00000486572 NT5MQ9NPB1 228 aa18.37■□□□□ 0.53
COL1A1-207ENST00000486572 HAUS2Q9NVX0 235 aa18.37■□□□□ 0.53
COL1A1-207ENST00000486572 AMACRQ9UHK6 382 aa18.37■□□□□ 0.53
COL1A1-207ENST00000486572 TTC24A2A3L6 582 aaPredicted RBP18.36■□□□□ 0.53
COL1A1-207ENST00000486572 GRID2IPA4D2P6 1211 aa18.36■□□□□ 0.53
COL1A1-207ENST00000486572 TRAFD1O14545 582 aaPredicted RBP18.36■□□□□ 0.53
COL1A1-207ENST00000486572 ARHGAP6O43182 974 aa18.36■□□□□ 0.53
COL1A1-207ENST00000486572 SOCS5O75159 536 aa18.36■□□□□ 0.53
COL1A1-207ENST00000486572 NEBLO76041 1014 aa18.36■□□□□ 0.53
COL1A1-207ENST00000486572 KRT10P13645 584 aa18.36■□□□□ 0.53
COL1A1-207ENST00000486572 CCNB1P14635 433 aa18.36■□□□□ 0.53
COL1A1-207ENST00000486572 PPIDQ08752 370 aaKnown RBP18.36■□□□□ 0.53
COL1A1-207ENST00000486572 OVGP1Q12889 678 aa18.36■□□□□ 0.53
COL1A1-207ENST00000486572 SLC14A1Q13336 389 aa18.36■□□□□ 0.53
COL1A1-207ENST00000486572 PDK1Q15118 436 aa18.36■□□□□ 0.53
COL1A1-207ENST00000486572 ERAP2Q6P179 960 aa18.36■□□□□ 0.53
COL1A1-207ENST00000486572 NPNTQ6UXI9 565 aa18.36■□□□□ 0.53
COL1A1-207ENST00000486572 IQCHQ86VS3 1027 aa18.36■□□□□ 0.53
COL1A1-207ENST00000486572 ZSWIM9Q86XI8 627 aa18.36■□□□□ 0.53
COL1A1-207ENST00000486572 CCDC50Q8IVM0 306 aa18.36■□□□□ 0.53
COL1A1-207ENST00000486572 CXorf40AQ8TE69 158 aa18.36■□□□□ 0.53
COL1A1-207ENST00000486572 LRRN4Q8WUT4 740 aa18.36■□□□□ 0.53
COL1A1-207ENST00000486572 NSMCE3Q96MG7 304 aa18.36■□□□□ 0.53
COL1A1-207ENST00000486572 OLFM3Q96PB7 478 aa18.36■□□□□ 0.53
COL1A1-207ENST00000486572 LGMNQ99538 433 aa18.36■□□□□ 0.53
COL1A1-207ENST00000486572 C1QTNF2Q9BXJ5 285 aa18.36■□□□□ 0.53
COL1A1-207ENST00000486572 POLR1EQ9GZS1 481 aaKnown RBP18.36■□□□□ 0.53
COL1A1-207ENST00000486572 IL21RQ9HBE5 538 aa18.36■□□□□ 0.53
COL1A1-207ENST00000486572 NOD2Q9HC29 1040 aa18.36■□□□□ 0.53
COL1A1-207ENST00000486572 FZD3Q9NPG1 666 aa18.36■□□□□ 0.53
COL1A1-207ENST00000486572 PCDH12Q9NPG4 1184 aa18.36■□□□□ 0.53
COL1A1-207ENST00000486572 TRIM10Q9UDY6 481 aa18.36■□□□□ 0.53
COL1A1-207ENST00000486572 DCHS1Q96JQ0 3298 aa18.36■□□□□ 0.53
COL1A1-207ENST00000486572 hCG_1818297A0A087WSY0 165 aa18.35■□□□□ 0.53
COL1A1-207ENST00000486572 A0A0U1RQJ8 604 aa18.35■□□□□ 0.53
COL1A1-207ENST00000486572 CCDC66A2RUB6 948 aa18.35■□□□□ 0.53
COL1A1-207ENST00000486572 GOLGA6L3A6NEY3 463 aa18.35■□□□□ 0.53
COL1A1-207ENST00000486572 IGLON5A6NGN9 336 aa18.35■□□□□ 0.53
COL1A1-207ENST00000486572 TLR4O00206 839 aa18.35■□□□□ 0.53
COL1A1-207ENST00000486572 PPP1R12AO14974 1030 aaPredicted RBP18.35■□□□□ 0.53
COL1A1-207ENST00000486572 CST8O60676 142 aa18.35■□□□□ 0.53
COL1A1-207ENST00000486572 MAGEC1O60732 1142 aa18.35■□□□□ 0.53
COL1A1-207ENST00000486572 ZNF883P0CG24 379 aa18.35■□□□□ 0.53
COL1A1-207ENST00000486572 ITIH2P19823 946 aa18.35■□□□□ 0.53
COL1A1-207ENST00000486572 NXPH1P58417 271 aa18.35■□□□□ 0.53
COL1A1-207ENST00000486572 POLR2LP62875 67 aaKnown RBP18.35■□□□□ 0.53
COL1A1-207ENST00000486572 ITKQ08881 620 aa18.35■□□□□ 0.53
COL1A1-207ENST00000486572 SGCGQ13326 291 aa18.35■□□□□ 0.53
COL1A1-207ENST00000486572 FGL2Q14314 439 aa18.35■□□□□ 0.53
COL1A1-207ENST00000486572 KAZNQ674X7 775 aa18.35■□□□□ 0.53
COL1A1-207ENST00000486572 ALG1LQ6GMV1 187 aa18.35■□□□□ 0.53
COL1A1-207ENST00000486572 ASB12Q8WXK4 309 aa18.35■□□□□ 0.53
COL1A1-207ENST00000486572 SPOCK2Q92563 424 aa18.35■□□□□ 0.53
COL1A1-207ENST00000486572 GDF3Q9NR23 364 aa18.35■□□□□ 0.53
COL1A1-207ENST00000486572 RBM22Q9NW64 420 aaKnown RBP eCLIP18.35■□□□□ 0.53
COL1A1-207ENST00000486572 CA5BQ9Y2D0 317 aa18.35■□□□□ 0.53
COL1A1-207ENST00000486572 FNDC3AQ9Y2H6 1198 aaKnown RBP18.35■□□□□ 0.53
COL1A1-207ENST00000486572 ATP8A1Q9Y2Q0 1164 aa18.35■□□□□ 0.53
COL1A1-207ENST00000486572 PCDHA3Q9Y5H8 950 aa18.35■□□□□ 0.53
COL1A1-207ENST00000486572 ADGRG1Q9Y653 693 aa18.35■□□□□ 0.53
COL1A1-207ENST00000486572 ANKRD36A6QL64 1941 aa18.35■□□□□ 0.53
COL1A1-207ENST00000486572 A0A1W2PQ67 120 aa18.34■□□□□ 0.53
COL1A1-207ENST00000486572 RIOK3O14730 519 aaKnown RBP18.34■□□□□ 0.53
COL1A1-207ENST00000486572 HTRA2O43464 458 aaPredicted RBP18.34■□□□□ 0.53
COL1A1-207ENST00000486572 PAK4O96013 591 aaPredicted RBP18.34■□□□□ 0.53
COL1A1-207ENST00000486572 TGM2P21980 687 aa18.34■□□□□ 0.53
COL1A1-207ENST00000486572 CTNNA2P26232 953 aa18.34■□□□□ 0.53
COL1A1-207ENST00000486572 MMP12P39900 470 aa18.34■□□□□ 0.53
COL1A1-207ENST00000486572 NR2C2P49116 596 aa18.34■□□□□ 0.53
COL1A1-207ENST00000486572 LLGL1Q15334 1064 aa18.34■□□□□ 0.53
COL1A1-207ENST00000486572 PPP2R5EQ16537 467 aa18.34■□□□□ 0.53
COL1A1-207ENST00000486572 ZNF423Q2M1K9 1284 aa18.34■□□□□ 0.53
COL1A1-207ENST00000486572 TMEM52BQ4KMG9 183 aa18.34■□□□□ 0.53
COL1A1-207ENST00000486572 BZW1Q7L1Q6 419 aaKnown RBP18.34■□□□□ 0.53
COL1A1-207ENST00000486572 ERMP1Q7Z2K6 904 aa18.34■□□□□ 0.53
COL1A1-207ENST00000486572 LRRC8AQ8IWT6 810 aa18.34■□□□□ 0.53
COL1A1-207ENST00000486572 SYCE1Q8N0S2 351 aa18.34■□□□□ 0.53
COL1A1-207ENST00000486572 SEMA3CQ99985 751 aa18.34■□□□□ 0.53
COL1A1-207ENST00000486572 WRAP53Q9BUR4 548 aaKnown RBP18.34■□□□□ 0.53
COL1A1-207ENST00000486572 TSGA10Q9BZW7 698 aa18.34■□□□□ 0.53
COL1A1-207ENST00000486572 BRD8Q9H0E9 1235 aa18.34■□□□□ 0.53
COL1A1-207ENST00000486572 TM7SF3Q9NS93 570 aa18.34■□□□□ 0.53
COL1A1-207ENST00000486572 TTLL3Q9Y4R7 772 aa18.34■□□□□ 0.53
COL1A1-207ENST00000486572 PCDHGC4Q9Y5F7 938 aa18.34■□□□□ 0.53
COL1A1-207ENST00000486572 CACNA1AO00555 2505 aa18.34■□□□□ 0.53
COL1A1-207ENST00000486572 TP53BP1Q12888 1972 aaPredicted RBP18.33■□□□□ 0.53
COL1A1-207ENST00000486572 H0Y8X5 98 aa18.33■□□□□ 0.52
COL1A1-207ENST00000486572 KCNK1O00180 336 aa18.33■□□□□ 0.52
COL1A1-207ENST00000486572 DFNA5O60443 496 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms