RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 CHSY1Q86X52 802 aa8.37□□□□□ -1.07
XRN1-212ENST00000486211 GKN2Q86XP6 184 aa8.37□□□□□ -1.07
XRN1-212ENST00000486211 HID1Q8IV36 788 aa8.37□□□□□ -1.07
XRN1-212ENST00000486211 TP53INP2Q8IXH6 220 aa8.37□□□□□ -1.07
XRN1-212ENST00000486211 MMP21Q8N119 569 aa8.37□□□□□ -1.07
XRN1-212ENST00000486211 SIX6OS1Q8N1H7 587 aa8.37□□□□□ -1.07
XRN1-212ENST00000486211 Q8NA96 180 aa8.37□□□□□ -1.07
XRN1-212ENST00000486211 DQX1Q8TE96 717 aaKnown RBP8.37□□□□□ -1.07
XRN1-212ENST00000486211 TSACCQ96A04 125 aaPredicted RBP8.37□□□□□ -1.07
XRN1-212ENST00000486211 RTP4Q96DX8 246 aa8.37□□□□□ -1.07
XRN1-212ENST00000486211 LURAP1Q96LR2 239 aa8.37□□□□□ -1.07
XRN1-212ENST00000486211 PRMT1Q99873 361 aaKnown RBP8.37□□□□□ -1.07
XRN1-212ENST00000486211 ASPSCR1Q9BZE9 553 aa8.37□□□□□ -1.07
XRN1-212ENST00000486211 MBNL1Q9NR56 388 aaKnown RBP8.37□□□□□ -1.07
XRN1-212ENST00000486211 DMAC2Q9NW81 257 aa8.37□□□□□ -1.07
XRN1-212ENST00000486211 OCIAD1Q9NX40 245 aa8.37□□□□□ -1.07
XRN1-212ENST00000486211 SLC39A1Q9NY26 324 aa8.37□□□□□ -1.07
XRN1-212ENST00000486211 LRIT1Q9P2V4 623 aa8.37□□□□□ -1.07
XRN1-212ENST00000486211 TFIP11Q9UBB9 837 aaKnown RBP8.37□□□□□ -1.07
XRN1-212ENST00000486211 KCND3Q9UK17 655 aa8.37□□□□□ -1.07
XRN1-212ENST00000486211 DYRK1BQ9Y463 629 aa8.37□□□□□ -1.07
XRN1-212ENST00000486211 TCAF2A6NFQ2 919 aa8.36□□□□□ -1.07
XRN1-212ENST00000486211 B4E171 279 aa8.36□□□□□ -1.07
XRN1-212ENST00000486211 SPTLC2O15270 562 aa8.36□□□□□ -1.07
XRN1-212ENST00000486211 ZNF821O75541 412 aaPredicted RBP8.36□□□□□ -1.07
XRN1-212ENST00000486211 DNAJB5O75953 348 aa8.36□□□□□ -1.07
XRN1-212ENST00000486211 CBX6O95503 412 aa8.36□□□□□ -1.07
XRN1-212ENST00000486211 LTFP02788 710 aa8.36□□□□□ -1.07
XRN1-212ENST00000486211 CTSEP14091 401 aa8.36□□□□□ -1.07
XRN1-212ENST00000486211 RRM1P23921 792 aa8.36□□□□□ -1.07
XRN1-212ENST00000486211 CD1CP29017 333 aa8.36□□□□□ -1.07
XRN1-212ENST00000486211 L1CAMP32004 1257 aa8.36□□□□□ -1.07
XRN1-212ENST00000486211 TSPAN7P41732 249 aa8.36□□□□□ -1.07
XRN1-212ENST00000486211 ABL2P42684 1182 aa8.36□□□□□ -1.07
XRN1-212ENST00000486211 LEPRP48357 1165 aaKnown RBP8.36□□□□□ -1.07
XRN1-212ENST00000486211 IRAK1P51617 712 aa8.36□□□□□ -1.07
XRN1-212ENST00000486211 LIMK2P53671 638 aa8.36□□□□□ -1.07
XRN1-212ENST00000486211 SLC8A3P57103 927 aa8.36□□□□□ -1.07
XRN1-212ENST00000486211 OR1D5P58170 312 aa8.36□□□□□ -1.07
XRN1-212ENST00000486211 BST2Q10589 180 aaKnown RBP8.36□□□□□ -1.07
XRN1-212ENST00000486211 POU4F2Q12837 409 aa8.36□□□□□ -1.07
XRN1-212ENST00000486211 TRA2AQ13595 282 aaKnown RBP eCLIP8.36□□□□□ -1.07
XRN1-212ENST00000486211 NR1D2Q14995 579 aa8.36□□□□□ -1.07
XRN1-212ENST00000486211 CLPPQ16740 277 aaPredicted RBP8.36□□□□□ -1.07
XRN1-212ENST00000486211 EDRF1Q3B7T1 1238 aa8.36□□□□□ -1.07
XRN1-212ENST00000486211 C14orf28Q4W4Y0 310 aa8.36□□□□□ -1.07
XRN1-212ENST00000486211 FAM26FQ5R3K3 315 aa8.36□□□□□ -1.07
XRN1-212ENST00000486211 DPY19L3Q6ZPD9 716 aa8.36□□□□□ -1.07
XRN1-212ENST00000486211 ZNF438Q7Z4V0 828 aa8.36□□□□□ -1.07
XRN1-212ENST00000486211 TMEM135Q86UB9 458 aa8.36□□□□□ -1.07
XRN1-212ENST00000486211 BEND7Q8N7W2 519 aaPredicted RBP8.36□□□□□ -1.07
XRN1-212ENST00000486211 AGBL5Q8NDL9 886 aa8.36□□□□□ -1.07
XRN1-212ENST00000486211 CCDC112Q8NEF3 446 aa8.36□□□□□ -1.07
XRN1-212ENST00000486211 TAS1R2Q8TE23 839 aa8.36□□□□□ -1.07
XRN1-212ENST00000486211 CLEC4CQ8WTT0 213 aa8.36□□□□□ -1.07
XRN1-212ENST00000486211 IRGQQ8WZA9 623 aa8.36□□□□□ -1.07
XRN1-212ENST00000486211 RNF34Q969K3 372 aa8.36□□□□□ -1.07
XRN1-212ENST00000486211 PPP1R16AQ96I34 528 aa8.36□□□□□ -1.07
XRN1-212ENST00000486211 CCDC114Q96M63 670 aa8.36□□□□□ -1.07
XRN1-212ENST00000486211 SERPINB11Q96P15 392 aa8.36□□□□□ -1.07
XRN1-212ENST00000486211 RBM15Q96T37 977 aaKnown RBP eCLIP8.36□□□□□ -1.07
XRN1-212ENST00000486211 PSMB7Q99436 277 aa8.36□□□□□ -1.07
XRN1-212ENST00000486211 TRIM55Q9BYV6 548 aa8.36□□□□□ -1.07
XRN1-212ENST00000486211 SLC29A3Q9BZD2 475 aa8.36□□□□□ -1.07
XRN1-212ENST00000486211 INTS2Q9H0H0 1204 aaKnown RBP8.36□□□□□ -1.07
XRN1-212ENST00000486211 CGNQ9P2M7 1197 aaKnown RBP8.36□□□□□ -1.07
XRN1-212ENST00000486211 IL36AQ9UHA7 158 aa8.36□□□□□ -1.07
XRN1-212ENST00000486211 FBXO2Q9UK22 296 aaPredicted RBP8.36□□□□□ -1.07
XRN1-212ENST00000486211 ITGB1BP2Q9UKP3 347 aa8.36□□□□□ -1.07
XRN1-212ENST00000486211 TSPAN16Q9UKR8 245 aa8.36□□□□□ -1.07
XRN1-212ENST00000486211 ITM2BQ9Y287 266 aa8.36□□□□□ -1.07
XRN1-212ENST00000486211 TMEM184BQ9Y519 407 aaPredicted RBP8.36□□□□□ -1.07
XRN1-212ENST00000486211 OAS3Q9Y6K5 1087 aaKnown RBP8.36□□□□□ -1.07
XRN1-212ENST00000486211 ANKHD1Q8IWZ3 2542 aaKnown RBP8.35□□□□□ -1.07
XRN1-212ENST00000486211 F5H5T6 163 aa8.35□□□□□ -1.07
XRN1-212ENST00000486211 TOR1BO14657 336 aa8.35□□□□□ -1.07
XRN1-212ENST00000486211 IKBKBO14920 756 aa8.35□□□□□ -1.07
XRN1-212ENST00000486211 TSPAN6O43657 245 aa8.35□□□□□ -1.07
XRN1-212ENST00000486211 SNAP91O60641 907 aa8.35□□□□□ -1.07
XRN1-212ENST00000486211 RASGRP1O95267 797 aa8.35□□□□□ -1.07
XRN1-212ENST00000486211 DLGAP3O95886 979 aa8.35□□□□□ -1.07
XRN1-212ENST00000486211 THRAP10827 490 aa8.35□□□□□ -1.07
XRN1-212ENST00000486211 LCP1P13796 627 aa8.35□□□□□ -1.07
XRN1-212ENST00000486211 CSF2RBP32927 897 aa8.35□□□□□ -1.07
XRN1-212ENST00000486211 STAT6P42226 847 aa8.35□□□□□ -1.07
XRN1-212ENST00000486211 STAT5AP42229 794 aa8.35□□□□□ -1.07
XRN1-212ENST00000486211 CENPCQ03188 943 aa8.35□□□□□ -1.07
XRN1-212ENST00000486211 DPYDQ12882 1025 aa8.35□□□□□ -1.07
XRN1-212ENST00000486211 ARHGEF7Q14155 803 aa8.35□□□□□ -1.07
XRN1-212ENST00000486211 AMZ1Q400G9 498 aa8.35□□□□□ -1.07
XRN1-212ENST00000486211 ZC3H12AQ5D1E8 599 aaKnown RBP8.35□□□□□ -1.07
XRN1-212ENST00000486211 ZRANB3Q5FWF4 1079 aa8.35□□□□□ -1.07
XRN1-212ENST00000486211 DCAF12Q5T6F0 453 aa8.35□□□□□ -1.07
XRN1-212ENST00000486211 SP5Q6BEB4 398 aaPredicted RBP8.35□□□□□ -1.07
XRN1-212ENST00000486211 C22orf39Q6P5X5 142 aa8.35□□□□□ -1.07
XRN1-212ENST00000486211 LINGO4Q6UY18 593 aa8.35□□□□□ -1.07
XRN1-212ENST00000486211 CCDC73Q6ZRK6 1079 aa8.35□□□□□ -1.07
XRN1-212ENST00000486211 TAC4Q86UU9 113 aa8.35□□□□□ -1.07
XRN1-212ENST00000486211 VPS36Q86VN1 386 aa8.35□□□□□ -1.07
XRN1-212ENST00000486211 C17orf82Q86X59 251 aaPredicted RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms