RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 HEY1Q9Y5J3 304 aa12.63□□□□□ -0.39
PTCD1-205ENST00000485746 HS3ST3A1Q9Y663 406 aa12.63□□□□□ -0.39
PTCD1-205ENST00000485746 ALG6Q9Y672 507 aa12.63□□□□□ -0.39
PTCD1-205ENST00000485746 CEP192Q8TEP8 1941 aa12.62□□□□□ -0.39
PTCD1-205ENST00000485746 A0A0A6YYK5 440 aaPredicted RBP12.62□□□□□ -0.39
PTCD1-205ENST00000485746 A0A1B0GTQ1 180 aa12.62□□□□□ -0.39
PTCD1-205ENST00000485746 SPAARA0A1B0GVQ0 90 aa12.62□□□□□ -0.39
PTCD1-205ENST00000485746 GOLGA8CPA6NN73 597 aa12.62□□□□□ -0.39
PTCD1-205ENST00000485746 AREL1O15033 823 aa12.62□□□□□ -0.39
PTCD1-205ENST00000485746 MUSKO15146 869 aa12.62□□□□□ -0.39
PTCD1-205ENST00000485746 MATN3O15232 486 aa12.62□□□□□ -0.39
PTCD1-205ENST00000485746 PRKCGP05129 697 aa12.62□□□□□ -0.39
PTCD1-205ENST00000485746 CCNCP24863 283 aa12.62□□□□□ -0.39
PTCD1-205ENST00000485746 DYNLT1P63172 113 aa12.62□□□□□ -0.39
PTCD1-205ENST00000485746 GALNT2Q10471 571 aa12.62□□□□□ -0.39
PTCD1-205ENST00000485746 TMEM52BQ4KMG9 183 aa12.62□□□□□ -0.39
PTCD1-205ENST00000485746 KAZNQ674X7 775 aa12.62□□□□□ -0.39
PTCD1-205ENST00000485746 Q6ZSR6 202 aa12.62□□□□□ -0.39
PTCD1-205ENST00000485746 CCDC50Q8IVM0 306 aa12.62□□□□□ -0.39
PTCD1-205ENST00000485746 PQLC3Q8N755 202 aa12.62□□□□□ -0.39
PTCD1-205ENST00000485746 FAF2Q96CS3 445 aa12.62□□□□□ -0.39
PTCD1-205ENST00000485746 CALR3Q96L12 384 aaKnown RBP12.62□□□□□ -0.39
PTCD1-205ENST00000485746 LENG8Q96PV6 779 aaPredicted RBP12.62□□□□□ -0.39
PTCD1-205ENST00000485746 NUDCD1Q96RS6 583 aa12.62□□□□□ -0.39
PTCD1-205ENST00000485746 C1QTNF2Q9BXJ5 285 aa12.62□□□□□ -0.39
PTCD1-205ENST00000485746 ERVMER34-1Q9H9K5 563 aa12.62□□□□□ -0.39
PTCD1-205ENST00000485746 NOD2Q9HC29 1040 aa12.62□□□□□ -0.39
PTCD1-205ENST00000485746 RBM22Q9NW64 420 aaKnown RBP eCLIP12.62□□□□□ -0.39
PTCD1-205ENST00000485746 SEPT10Q9P0V9 454 aa12.62□□□□□ -0.39
PTCD1-205ENST00000485746 PCDHGC4Q9Y5F7 938 aa12.62□□□□□ -0.39
PTCD1-205ENST00000485746 TNRC6BQ9UPQ9 1833 aaKnown RBP12.62□□□□□ -0.39
PTCD1-205ENST00000485746 ZNF292O60281 2723 aa12.61□□□□□ -0.39
PTCD1-205ENST00000485746 NUMA1Q14980 2115 aa12.61□□□□□ -0.39
PTCD1-205ENST00000485746 A0A1W2PQ67 120 aa12.61□□□□□ -0.39
PTCD1-205ENST00000485746 A8MX80 341 aa12.61□□□□□ -0.39
PTCD1-205ENST00000485746 ZNF487B1APH4 448 aa12.61□□□□□ -0.39
PTCD1-205ENST00000485746 C10orf142B7Z368 130 aa12.61□□□□□ -0.39
PTCD1-205ENST00000485746 PSTPIP1O43586 416 aa12.61□□□□□ -0.39
PTCD1-205ENST00000485746 ZRANB2O95218 330 aaKnown RBP eCLIP12.61□□□□□ -0.39
PTCD1-205ENST00000485746 CPP00450 1065 aa12.61□□□□□ -0.39
PTCD1-205ENST00000485746 ADRB1P08588 477 aa12.61□□□□□ -0.39
PTCD1-205ENST00000485746 KRT10P13645 584 aa12.61□□□□□ -0.39
PTCD1-205ENST00000485746 CCNB1P14635 433 aa12.61□□□□□ -0.39
PTCD1-205ENST00000485746 GRK6P43250 576 aa12.61□□□□□ -0.39
PTCD1-205ENST00000485746 RABIFP47224 123 aa12.61□□□□□ -0.39
PTCD1-205ENST00000485746 HADHBP55084 474 aaKnown RBP12.61□□□□□ -0.39
PTCD1-205ENST00000485746 SEMG2Q02383 582 aa12.61□□□□□ -0.39
PTCD1-205ENST00000485746 GBE1Q04446 702 aa12.61□□□□□ -0.39
PTCD1-205ENST00000485746 AP1B1Q10567 949 aa12.61□□□□□ -0.39
PTCD1-205ENST00000485746 FOXC1Q12948 553 aa12.61□□□□□ -0.39
PTCD1-205ENST00000485746 TFDP2Q14188 446 aa12.61□□□□□ -0.39
PTCD1-205ENST00000485746 FGL2Q14314 439 aa12.61□□□□□ -0.39
PTCD1-205ENST00000485746 PDK1Q15118 436 aa12.61□□□□□ -0.39
PTCD1-205ENST00000485746 HS1BP3Q53T59 392 aa12.61□□□□□ -0.39
PTCD1-205ENST00000485746 RALGPS1Q5JS13 557 aa12.61□□□□□ -0.39
PTCD1-205ENST00000485746 RAD9BQ6WBX8 426 aa12.61□□□□□ -0.39
PTCD1-205ENST00000485746 BZW1Q7L1Q6 419 aaKnown RBP12.61□□□□□ -0.39
PTCD1-205ENST00000485746 SPATS2Q86XZ4 545 aaKnown RBP12.61□□□□□ -0.39
PTCD1-205ENST00000485746 GATAD2AQ86YP4 633 aa12.61□□□□□ -0.39
PTCD1-205ENST00000485746 DCP2Q8IU60 420 aaKnown RBP12.61□□□□□ -0.39
PTCD1-205ENST00000485746 CCDC13Q8IYE1 715 aa12.61□□□□□ -0.39
PTCD1-205ENST00000485746 RCOR2Q8IZ40 523 aa12.61□□□□□ -0.39
PTCD1-205ENST00000485746 NDUFAF2Q8N183 169 aa12.61□□□□□ -0.39
PTCD1-205ENST00000485746 TMEM145Q8NBT3 493 aa12.61□□□□□ -0.39
PTCD1-205ENST00000485746 ACRBPQ8NEB7 543 aa12.61□□□□□ -0.39
PTCD1-205ENST00000485746 OR13H1Q8NG92 308 aa12.61□□□□□ -0.39
PTCD1-205ENST00000485746 LRRN4Q8WUT4 740 aa12.61□□□□□ -0.39
PTCD1-205ENST00000485746 ASB12Q8WXK4 309 aa12.61□□□□□ -0.39
PTCD1-205ENST00000485746 CDC6Q99741 560 aa12.61□□□□□ -0.39
PTCD1-205ENST00000485746 MGME1Q9BQP7 344 aa12.61□□□□□ -0.39
PTCD1-205ENST00000485746 POLR1EQ9GZS1 481 aaKnown RBP12.61□□□□□ -0.39
PTCD1-205ENST00000485746 GOLPH3Q9H4A6 298 aa12.61□□□□□ -0.39
PTCD1-205ENST00000485746 DTLQ9NZJ0 730 aa12.61□□□□□ -0.39
PTCD1-205ENST00000485746 ATP8A1Q9Y2Q0 1164 aa12.61□□□□□ -0.39
PTCD1-205ENST00000485746 COQ6Q9Y2Z9 468 aa12.61□□□□□ -0.39
PTCD1-205ENST00000485746 GON4LQ3T8J9 2241 aa12.6□□□□□ -0.39
PTCD1-205ENST00000485746 TSPAN11A1L157 253 aa12.6□□□□□ -0.39
PTCD1-205ENST00000485746 RIOK3O14730 519 aaKnown RBP12.6□□□□□ -0.39
PTCD1-205ENST00000485746 PPP1R12AO14974 1030 aaPredicted RBP12.6□□□□□ -0.39
PTCD1-205ENST00000485746 RAD51BO15315 384 aa12.6□□□□□ -0.39
PTCD1-205ENST00000485746 PCDHGA12O60330 932 aa12.6□□□□□ -0.39
PTCD1-205ENST00000485746 SOCS5O75159 536 aa12.6□□□□□ -0.39
PTCD1-205ENST00000485746 PEX11BO96011 259 aa12.6□□□□□ -0.39
PTCD1-205ENST00000485746 ELFN1P0C7U0 828 aa12.6□□□□□ -0.39
PTCD1-205ENST00000485746 CES1P23141 567 aa12.6□□□□□ -0.39
PTCD1-205ENST00000485746 CETN2P41208 172 aa12.6□□□□□ -0.39
PTCD1-205ENST00000485746 LIG3P49916 1009 aa12.6□□□□□ -0.39
PTCD1-205ENST00000485746 VAV2P52735 878 aa12.6□□□□□ -0.39
PTCD1-205ENST00000485746 EPHB1P54762 984 aa12.6□□□□□ -0.39
PTCD1-205ENST00000485746 GSDMDP57764 484 aa12.6□□□□□ -0.39
PTCD1-205ENST00000485746 SLC10A2Q12908 348 aaPredicted RBP12.6□□□□□ -0.39
PTCD1-205ENST00000485746 BNIP3Q12983 259 aa12.6□□□□□ -0.39
PTCD1-205ENST00000485746 PTK2BQ14289 1009 aa12.6□□□□□ -0.39
PTCD1-205ENST00000485746 LRRC14Q15048 493 aa12.6□□□□□ -0.39
PTCD1-205ENST00000485746 LLGL1Q15334 1064 aa12.6□□□□□ -0.39
PTCD1-205ENST00000485746 CCDC157Q569K6 752 aa12.6□□□□□ -0.39
PTCD1-205ENST00000485746 ARMC12Q5T9G4 340 aa12.6□□□□□ -0.39
PTCD1-205ENST00000485746 CCDC181Q5TID7 509 aa12.6□□□□□ -0.39
PTCD1-205ENST00000485746 C11orf63Q6NUN7 778 aa12.6□□□□□ -0.39
PTCD1-205ENST00000485746 MFSD7Q6UXD7 560 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms