RNA–Protein interactions for RNA: ENST00000485680.1

SPTA1-207, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 422 nt, Biotype processed transcript, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-207ENST00000485680 TUBB4AP04350 444 aa5.03□□□□□ -1.6
SPTA1-207ENST00000485680 PFKFB1P16118 471 aa5.03□□□□□ -1.6
SPTA1-207ENST00000485680 IGFBP2P18065 325 aa5.03□□□□□ -1.6
SPTA1-207ENST00000485680 ITGB6P18564 788 aa5.03□□□□□ -1.6
SPTA1-207ENST00000485680 CD53P19397 219 aa5.03□□□□□ -1.6
SPTA1-207ENST00000485680 CYP3A7P24462 503 aa5.03□□□□□ -1.6
SPTA1-207ENST00000485680 TM4SF1P30408 202 aa5.03□□□□□ -1.6
SPTA1-207ENST00000485680 HOXD12P35452 270 aa5.03□□□□□ -1.6
SPTA1-207ENST00000485680 PCP4P48539 62 aa5.03□□□□□ -1.6
SPTA1-207ENST00000485680 B4GALNT1Q00973 533 aa5.03□□□□□ -1.6
SPTA1-207ENST00000485680 SLC4A8Q2Y0W8 1093 aa5.03□□□□□ -1.6
SPTA1-207ENST00000485680 CTXN3Q4LDR2 81 aa5.03□□□□□ -1.6
SPTA1-207ENST00000485680 TMEM119Q4V9L6 283 aa5.03□□□□□ -1.6
SPTA1-207ENST00000485680 RESP18Q5W5W9 173 aa5.03□□□□□ -1.6
SPTA1-207ENST00000485680 SYCE2Q6PIF2 218 aa5.03□□□□□ -1.6
SPTA1-207ENST00000485680 MTERF4Q7Z6M4 381 aaKnown RBP5.03□□□□□ -1.6
SPTA1-207ENST00000485680 CHSY1Q86X52 802 aa5.03□□□□□ -1.6
SPTA1-207ENST00000485680 ADGRF3Q8IZF5 1079 aa5.03□□□□□ -1.6
SPTA1-207ENST00000485680 ZNF444Q8N0Y2 327 aaPredicted RBP5.03□□□□□ -1.6
SPTA1-207ENST00000485680 PTGR2Q8N8N7 351 aaPredicted RBP5.03□□□□□ -1.6
SPTA1-207ENST00000485680 TRIML1Q8N9V2 468 aa5.03□□□□□ -1.6
SPTA1-207ENST00000485680 CNNM3Q8NE01 707 aa5.03□□□□□ -1.6
SPTA1-207ENST00000485680 ADAMTS18Q8TE60 1221 aa5.03□□□□□ -1.6
SPTA1-207ENST00000485680 CCDC12Q8WUD4 166 aaPredicted RBP5.03□□□□□ -1.6
SPTA1-207ENST00000485680 SDR42E1Q8WUS8 393 aa5.03□□□□□ -1.6
SPTA1-207ENST00000485680 STAMQ92783 540 aa5.03□□□□□ -1.6
SPTA1-207ENST00000485680 HIC2Q96JB3 615 aa5.03□□□□□ -1.6
SPTA1-207ENST00000485680 FYTTD1Q96QD9 318 aaKnown RBP5.03□□□□□ -1.6
SPTA1-207ENST00000485680 OSBPL5Q9H0X9 879 aaPredicted RBP5.03□□□□□ -1.6
SPTA1-207ENST00000485680 GOLPH3LQ9H4A5 285 aa5.03□□□□□ -1.6
SPTA1-207ENST00000485680 KAT14Q9H8E8 782 aa5.03□□□□□ -1.6
SPTA1-207ENST00000485680 PRDM16Q9HAZ2 1276 aa5.03□□□□□ -1.6
SPTA1-207ENST00000485680 NOD2Q9HC29 1040 aa5.03□□□□□ -1.6
SPTA1-207ENST00000485680 TMLHEQ9NVH6 421 aa5.03□□□□□ -1.6
SPTA1-207ENST00000485680 MCM9Q9NXL9 1143 aa5.03□□□□□ -1.6
SPTA1-207ENST00000485680 AATFQ9NY61 560 aaKnown RBP eCLIP5.03□□□□□ -1.6
SPTA1-207ENST00000485680 MTMR4Q9NYA4 1195 aa5.03□□□□□ -1.6
SPTA1-207ENST00000485680 PI4KBQ9UBF8 816 aa5.03□□□□□ -1.6
SPTA1-207ENST00000485680 ZNHIT2Q9UHR6 403 aa5.03□□□□□ -1.6
SPTA1-207ENST00000485680 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.03□□□□□ -1.6
SPTA1-207ENST00000485680 SRPRBQ9Y5M8 271 aaKnown RBP5.03□□□□□ -1.6
SPTA1-207ENST00000485680 THSD7AQ9UPZ6 1657 aa5.02□□□□□ -1.61
SPTA1-207ENST00000485680 AFF2P51816 1311 aa5.02□□□□□ -1.61
SPTA1-207ENST00000485680 MYH14Q7Z406 1995 aaKnown RBP5.02□□□□□ -1.61
SPTA1-207ENST00000485680 TTC34A8MYJ7 566 aa5.02□□□□□ -1.61
SPTA1-207ENST00000485680 BTBD18B2RXH4 712 aa5.02□□□□□ -1.61
SPTA1-207ENST00000485680 BTBD19C9JJ37 291 aa5.02□□□□□ -1.61
SPTA1-207ENST00000485680 KIF2AO00139 706 aaPredicted RBP5.02□□□□□ -1.61
SPTA1-207ENST00000485680 SEPT4O43236 478 aa5.02□□□□□ -1.61
SPTA1-207ENST00000485680 HOXC11O43248 304 aaPredicted RBP5.02□□□□□ -1.61
SPTA1-207ENST00000485680 HNRNPRO43390 633 aaKnown RBP5.02□□□□□ -1.61
SPTA1-207ENST00000485680 SERPINB2P05120 415 aa5.02□□□□□ -1.61
SPTA1-207ENST00000485680 TSPY3P0CV98 308 aa5.02□□□□□ -1.61
SPTA1-207ENST00000485680 TSPY8P0CW00 308 aa5.02□□□□□ -1.61
SPTA1-207ENST00000485680 MARCKSP29966 332 aaPredicted RBP5.02□□□□□ -1.61
SPTA1-207ENST00000485680 ALDH1B1P30837 517 aa5.02□□□□□ -1.61
SPTA1-207ENST00000485680 IDUAP35475 653 aa5.02□□□□□ -1.61
SPTA1-207ENST00000485680 ZNF84P51523 738 aa5.02□□□□□ -1.61
SPTA1-207ENST00000485680 SOX10P56693 466 aa5.02□□□□□ -1.61
SPTA1-207ENST00000485680 DYNLL1P63167 89 aaKnown RBP5.02□□□□□ -1.61
SPTA1-207ENST00000485680 TLE2Q04725 743 aa5.02□□□□□ -1.61
SPTA1-207ENST00000485680 CDK18Q07002 472 aa5.02□□□□□ -1.61
SPTA1-207ENST00000485680 TRPC3Q13507 836 aa5.02□□□□□ -1.61
SPTA1-207ENST00000485680 SEC23BQ15437 767 aa5.02□□□□□ -1.61
SPTA1-207ENST00000485680 CRY2Q49AN0 593 aa5.02□□□□□ -1.61
SPTA1-207ENST00000485680 C12orf60Q5U649 245 aa5.02□□□□□ -1.61
SPTA1-207ENST00000485680 ATG16L1Q676U5 607 aa5.02□□□□□ -1.61
SPTA1-207ENST00000485680 VSTM1Q6UX27 236 aa5.02□□□□□ -1.61
SPTA1-207ENST00000485680 RANBP10Q6VN20 620 aa5.02□□□□□ -1.61
SPTA1-207ENST00000485680 KRBA2Q6ZNG9 492 aa5.02□□□□□ -1.61
SPTA1-207ENST00000485680 BBS12Q6ZW61 710 aa5.02□□□□□ -1.61
SPTA1-207ENST00000485680 TMTC3Q6ZXV5 915 aa5.02□□□□□ -1.61
SPTA1-207ENST00000485680 TFAP2DQ7Z6R9 452 aa5.02□□□□□ -1.61
SPTA1-207ENST00000485680 ADGRA1Q86SQ6 560 aa5.02□□□□□ -1.61
SPTA1-207ENST00000485680 PNLDC1Q8NA58 520 aaKnown RBP5.02□□□□□ -1.61
SPTA1-207ENST00000485680 MLKLQ8NB16 471 aa5.02□□□□□ -1.61
SPTA1-207ENST00000485680 SPC24Q8NBT2 197 aa5.02□□□□□ -1.61
SPTA1-207ENST00000485680 SRFBP1Q8NEF9 429 aaKnown RBP5.02□□□□□ -1.61
SPTA1-207ENST00000485680 CCDC148Q8NFR7 591 aa5.02□□□□□ -1.61
SPTA1-207ENST00000485680 HTRA1Q92743 480 aa5.02□□□□□ -1.61
SPTA1-207ENST00000485680 KCNJ9Q92806 393 aa5.02□□□□□ -1.61
SPTA1-207ENST00000485680 MAP7D2Q96T17 732 aa5.02□□□□□ -1.61
SPTA1-207ENST00000485680 HTATIP2Q9BUP3 242 aa5.02□□□□□ -1.61
SPTA1-207ENST00000485680 HDHD5Q9BXW7 423 aa5.02□□□□□ -1.61
SPTA1-207ENST00000485680 GPR63Q9BZJ6 419 aa5.02□□□□□ -1.61
SPTA1-207ENST00000485680 FTOQ9C0B1 505 aaKnown RBP eCLIP5.02□□□□□ -1.61
SPTA1-207ENST00000485680 WASH6PQ9NQA3 447 aa5.02□□□□□ -1.61
SPTA1-207ENST00000485680 SEMA4GQ9NTN9 838 aa5.02□□□□□ -1.61
SPTA1-207ENST00000485680 TUBE1Q9UJT0 475 aa5.02□□□□□ -1.61
SPTA1-207ENST00000485680 DUOX1Q9NRD9 1551 aa5.02□□□□□ -1.61
SPTA1-207ENST00000485680 MROH7-TTC4A0A0A0MT08 1334 aa5.01□□□□□ -1.61
SPTA1-207ENST00000485680 COL24A1Q17RW2 1714 aa5.01□□□□□ -1.61
SPTA1-207ENST00000485680 GPR75-ASB3A0A0A6YYF3 556 aa5.01□□□□□ -1.61
SPTA1-207ENST00000485680 NPIPB13A6NJU9 1138 aa5.01□□□□□ -1.61
SPTA1-207ENST00000485680 LRRC3CA6NJW4 275 aa5.01□□□□□ -1.61
SPTA1-207ENST00000485680 NPIPB5A8MRT5 1133 aa5.01□□□□□ -1.61
SPTA1-207ENST00000485680 NPIPB4C9JG80 1138 aa5.01□□□□□ -1.61
SPTA1-207ENST00000485680 POC1B-GALNT4F8VUJ3 575 aa5.01□□□□□ -1.61
SPTA1-207ENST00000485680 LAD1O00515 517 aa5.01□□□□□ -1.61
SPTA1-207ENST00000485680 DYNC1I1O14576 645 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms