RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 MPOP05164 745 aa16.84■□□□□ 0.29
CTSA-207ENST00000484855 INSCQ1MX18 579 aa16.84■□□□□ 0.29
CTSA-207ENST00000484855 SLC5A9Q2M3M2 681 aa16.84■□□□□ 0.29
CTSA-207ENST00000484855 NEPROQ6NW34 567 aa16.84■□□□□ 0.29
CTSA-207ENST00000484855 APCDD1Q8J025 514 aa16.84■□□□□ 0.29
CTSA-207ENST00000484855 LEMD2Q8NC56 503 aa16.84■□□□□ 0.29
CTSA-207ENST00000484855 MECRQ9BV79 373 aa16.84■□□□□ 0.29
CTSA-207ENST00000484855 LHX3Q9UBR4 397 aa16.84■□□□□ 0.29
CTSA-207ENST00000484855 SLC39A10Q9ULF5 831 aa16.84■□□□□ 0.29
CTSA-207ENST00000484855 ARIH1Q9Y4X5 557 aaPredicted RBP16.84■□□□□ 0.29
CTSA-207ENST00000484855 PER2O15055 1255 aa16.83■□□□□ 0.28
CTSA-207ENST00000484855 GABRB3P28472 473 aa16.83■□□□□ 0.28
CTSA-207ENST00000484855 RHOAP61586 193 aa16.83■□□□□ 0.28
CTSA-207ENST00000484855 FYB2Q5VWT5 728 aa16.83■□□□□ 0.28
CTSA-207ENST00000484855 C16orf46Q6P387 395 aa16.83■□□□□ 0.28
CTSA-207ENST00000484855 TRIM42Q8IWZ5 723 aa16.83■□□□□ 0.28
CTSA-207ENST00000484855 KIAA1522Q9P206 1035 aaPredicted RBP16.83■□□□□ 0.28
CTSA-207ENST00000484855 EMCNQ9ULC0 261 aa16.83■□□□□ 0.28
CTSA-207ENST00000484855 FCF1Q9Y324 198 aaKnown RBP16.83■□□□□ 0.28
CTSA-207ENST00000484855 A0A096LPK6 155 aa16.82■□□□□ 0.28
CTSA-207ENST00000484855 PIRTP0C851 137 aa16.82■□□□□ 0.28
CTSA-207ENST00000484855 PRAMEP78395 509 aa16.82■□□□□ 0.28
CTSA-207ENST00000484855 IRX4P78413 519 aa16.82■□□□□ 0.28
CTSA-207ENST00000484855 NTHL1P78549 312 aa16.82■□□□□ 0.28
CTSA-207ENST00000484855 LMAN2Q12907 356 aa16.82■□□□□ 0.28
CTSA-207ENST00000484855 GPM6BQ13491 265 aa16.82■□□□□ 0.28
CTSA-207ENST00000484855 ZNF697Q5TEC3 545 aa16.82■□□□□ 0.28
CTSA-207ENST00000484855 KIAA0408Q6ZU52 694 aa16.82■□□□□ 0.28
CTSA-207ENST00000484855 OTOAQ7RTW8 1153 aa16.82■□□□□ 0.28
CTSA-207ENST00000484855 OTUD6BQ8N6M0 293 aa16.82■□□□□ 0.28
CTSA-207ENST00000484855 ACVR1CQ8NER5 493 aa16.82■□□□□ 0.28
CTSA-207ENST00000484855 BRSK1Q8TDC3 778 aa16.82■□□□□ 0.28
CTSA-207ENST00000484855 RMDN1Q96DB5 314 aa16.82■□□□□ 0.28
CTSA-207ENST00000484855 SAMD11Q96NU1 681 aa16.82■□□□□ 0.28
CTSA-207ENST00000484855 FBXO5Q9UKT4 447 aa16.82■□□□□ 0.28
CTSA-207ENST00000484855 CLEC4EQ9ULY5 219 aa16.82■□□□□ 0.28
CTSA-207ENST00000484855 ARL2BPQ9Y2Y0 163 aa16.82■□□□□ 0.28
CTSA-207ENST00000484855 KCTD3Q9Y597 815 aa16.82■□□□□ 0.28
CTSA-207ENST00000484855 RAI2Q9Y5P3 530 aa16.82■□□□□ 0.28
CTSA-207ENST00000484855 ARL5AQ9Y689 179 aa16.82■□□□□ 0.28
CTSA-207ENST00000484855 CHD9Q3L8U1 2897 aa16.82■□□□□ 0.28
CTSA-207ENST00000484855 SLC7A4O43246 635 aa16.82■□□□□ 0.28
CTSA-207ENST00000484855 PLIN3O60664 434 aa16.82■□□□□ 0.28
CTSA-207ENST00000484855 GSTA1P08263 222 aa16.82■□□□□ 0.28
CTSA-207ENST00000484855 CD151P48509 253 aa16.82■□□□□ 0.28
CTSA-207ENST00000484855 NSUN2Q08J23 767 aaKnown RBP eCLIP16.82■□□□□ 0.28
CTSA-207ENST00000484855 USP10Q14694 798 aaKnown RBP16.82■□□□□ 0.28
CTSA-207ENST00000484855 DLG2Q15700 870 aa16.82■□□□□ 0.28
CTSA-207ENST00000484855 RNF187Q5TA31 235 aaPredicted RBP16.82■□□□□ 0.28
CTSA-207ENST00000484855 PDE12Q6L8Q7 609 aaKnown RBP16.82■□□□□ 0.28
CTSA-207ENST00000484855 RETSATQ6NUM9 610 aa16.82■□□□□ 0.28
CTSA-207ENST00000484855 YTHDF3Q7Z739 585 aaKnown RBP16.82■□□□□ 0.28
CTSA-207ENST00000484855 NUDCD3Q8IVD9 361 aa16.82■□□□□ 0.28
CTSA-207ENST00000484855 OR6P1Q8NGX9 317 aa16.82■□□□□ 0.28
CTSA-207ENST00000484855 FIBINQ8TAL6 211 aa16.82■□□□□ 0.28
CTSA-207ENST00000484855 RIN3Q8TB24 985 aa16.82■□□□□ 0.28
CTSA-207ENST00000484855 PEX13Q92968 403 aa16.82■□□□□ 0.28
CTSA-207ENST00000484855 USP13Q92995 863 aaPredicted RBP16.82■□□□□ 0.28
CTSA-207ENST00000484855 HDAC10Q969S8 669 aa16.82■□□□□ 0.28
CTSA-207ENST00000484855 TSSK1BQ9BXA7 367 aa16.82■□□□□ 0.28
CTSA-207ENST00000484855 MFSD1Q9H3U5 465 aa16.82■□□□□ 0.28
CTSA-207ENST00000484855 TDP1Q9NUW8 608 aa16.82■□□□□ 0.28
CTSA-207ENST00000484855 DPP7Q9UHL4 492 aa16.82■□□□□ 0.28
CTSA-207ENST00000484855 NUP210Q8TEM1 1887 aaPredicted RBP16.82■□□□□ 0.28
CTSA-207ENST00000484855 CCL22O00626 93 aa16.81■□□□□ 0.28
CTSA-207ENST00000484855 BIRC5O15392 142 aa16.81■□□□□ 0.28
CTSA-207ENST00000484855 BPGMP07738 259 aa16.81■□□□□ 0.28
CTSA-207ENST00000484855 SAT1P21673 171 aa16.81■□□□□ 0.28
CTSA-207ENST00000484855 GMPRP36959 345 aa16.81■□□□□ 0.28
CTSA-207ENST00000484855 ARSDP51689 593 aa16.81■□□□□ 0.28
CTSA-207ENST00000484855 PRSS36Q5K4E3 855 aa16.81■□□□□ 0.28
CTSA-207ENST00000484855 RNF43Q68DV7 783 aa16.81■□□□□ 0.28
CTSA-207ENST00000484855 NCEH1Q6PIU2 408 aa16.81■□□□□ 0.28
CTSA-207ENST00000484855 CCDC121Q6ZUS5 278 aa16.81■□□□□ 0.28
CTSA-207ENST00000484855 RAPH1Q70E73 1250 aa16.81■□□□□ 0.28
CTSA-207ENST00000484855 GRASPQ7Z6J2 395 aaPredicted RBP16.81■□□□□ 0.28
CTSA-207ENST00000484855 SRLQ86TD4 932 aa16.81■□□□□ 0.28
CTSA-207ENST00000484855 RBM23Q86U06 439 aaKnown RBP16.81■□□□□ 0.28
CTSA-207ENST00000484855 SLC41A1Q8IVJ1 513 aa16.81■□□□□ 0.28
CTSA-207ENST00000484855 LPCAT1Q8NF37 534 aa16.81■□□□□ 0.28
CTSA-207ENST00000484855 ACDQ96AP0 544 aa16.81■□□□□ 0.28
CTSA-207ENST00000484855 PLCD4Q9BRC7 762 aa16.81■□□□□ 0.28
CTSA-207ENST00000484855 FBXO6Q9NRD1 293 aaPredicted RBP16.81■□□□□ 0.28
CTSA-207ENST00000484855 ZDHHC7Q9NXF8 308 aa16.81■□□□□ 0.28
CTSA-207ENST00000484855 SIRPGQ9P1W8 387 aa16.81■□□□□ 0.28
CTSA-207ENST00000484855 RRP15Q9Y3B9 282 aaKnown RBP16.81■□□□□ 0.28
CTSA-207ENST00000484855 PCDHGC4Q9Y5F7 938 aa16.81■□□□□ 0.28
CTSA-207ENST00000484855 HCFC2Q9Y5Z7 792 aa16.81■□□□□ 0.28
CTSA-207ENST00000484855 CCDC195A0A1B0GUA6 201 aa16.81■□□□□ 0.28
CTSA-207ENST00000484855 FAM95CA0A1B0GW59 222 aa16.81■□□□□ 0.28
CTSA-207ENST00000484855 SOBPA7XYQ1 873 aa16.81■□□□□ 0.28
CTSA-207ENST00000484855 KLF11O14901 512 aa16.81■□□□□ 0.28
CTSA-207ENST00000484855 MT-CO1P00395 513 aa16.81■□□□□ 0.28
CTSA-207ENST00000484855 PRLP01236 227 aa16.81■□□□□ 0.28
CTSA-207ENST00000484855 C2P06681 752 aa16.81■□□□□ 0.28
CTSA-207ENST00000484855 CD70P32970 193 aa16.81■□□□□ 0.28
CTSA-207ENST00000484855 POLD2P49005 469 aa16.81■□□□□ 0.28
CTSA-207ENST00000484855 TMPRSS15P98073 1019 aa16.81■□□□□ 0.28
CTSA-207ENST00000484855 IRF9Q00978 393 aa16.81■□□□□ 0.28
CTSA-207ENST00000484855 ACVR1Q04771 509 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms