RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 ANKRD20A1Q5TYW2 823 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 ANKRD20A3Q5VUR7 823 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 ITPRIPL1Q6GPH6 555 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 RWDD4Q6NW29 188 aaKnown RBP7.04□□□□□ -1.28
BRCA1-216ENST00000484087 LRRC31Q6UY01 552 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 CHST9Q7L1S5 443 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 MFN1Q8IWA4 741 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 APCDD1Q8J025 514 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 CNPY4Q8N129 248 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 CPXM2Q8N436 756 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 TAB3Q8N5C8 712 aaPredicted RBP7.04□□□□□ -1.28
BRCA1-216ENST00000484087 ATP6V0D2Q8N8Y2 350 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 FBXO36Q8NEA4 188 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 CCDC110Q8TBZ0 833 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 IGSF8Q969P0 613 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 TLCD1Q96CP7 247 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 TBC1D31Q96DN5 1066 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 PWWP2AQ96N64 755 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 SPATA13Q96N96 652 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 VAT1Q99536 393 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 SELENOSQ9BQE4 189 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 IER2Q9BTL4 223 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 SIK2Q9H0K1 926 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 ARRDC1-AS1Q9H2J1 176 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 ETNK1Q9HBU6 452 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 XAB2Q9HCS7 855 aaKnown RBP7.04□□□□□ -1.28
BRCA1-216ENST00000484087 CD248Q9HCU0 757 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 SEPT10Q9P0V9 454 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 FETUBQ9UGM5 382 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 SLC24A2Q9UI40 661 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 MBD1Q9UIS9 605 aaPredicted RBP7.04□□□□□ -1.28
BRCA1-216ENST00000484087 FBXO10Q9UK96 956 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 TRHDEQ9UKU6 1024 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 INTS6Q9UL03 887 aaKnown RBP7.04□□□□□ -1.28
BRCA1-216ENST00000484087 VANGL2Q9ULK5 521 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 TLR6Q9Y2C9 796 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 IKBKGQ9Y6K9 419 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 STON1Q9Y6Q2 735 aa7.04□□□□□ -1.28
BRCA1-216ENST00000484087 PLXNA2O75051 1894 aa7.03□□□□□ -1.28
BRCA1-216ENST00000484087 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.03□□□□□ -1.28
BRCA1-216ENST00000484087 SRRM3A6NNA2 597 aaPredicted RBP7.03□□□□□ -1.28
BRCA1-216ENST00000484087 PATE3B3GLJ2 98 aa7.03□□□□□ -1.28
BRCA1-216ENST00000484087 POC1B-GALNT4F8VUJ3 575 aa7.03□□□□□ -1.28
BRCA1-216ENST00000484087 AP3B1O00203 1094 aa7.03□□□□□ -1.28
BRCA1-216ENST00000484087 RNF103O00237 685 aa7.03□□□□□ -1.28
BRCA1-216ENST00000484087 SHOX2O60902 331 aaPredicted RBP7.03□□□□□ -1.28
BRCA1-216ENST00000484087 ATG13O75143 517 aa7.03□□□□□ -1.28
BRCA1-216ENST00000484087 CNTN5O94779 1100 aa7.03□□□□□ -1.28
BRCA1-216ENST00000484087 TMEM63AO94886 807 aa7.03□□□□□ -1.28
BRCA1-216ENST00000484087 LRIG2O94898 1065 aa7.03□□□□□ -1.28
BRCA1-216ENST00000484087 CPP00450 1065 aa7.03□□□□□ -1.28
BRCA1-216ENST00000484087 CYBBP04839 570 aa7.03□□□□□ -1.28
BRCA1-216ENST00000484087 GSTA2P09210 222 aa7.03□□□□□ -1.28
BRCA1-216ENST00000484087 PABPC1P11940 636 aaKnown RBP7.03□□□□□ -1.28
BRCA1-216ENST00000484087 VAV1P15498 845 aa7.03□□□□□ -1.28
BRCA1-216ENST00000484087 TGM1P22735 817 aa7.03□□□□□ -1.28
BRCA1-216ENST00000484087 NTSR1P30989 418 aa7.03□□□□□ -1.28
BRCA1-216ENST00000484087 STX2P32856 288 aa7.03□□□□□ -1.28
BRCA1-216ENST00000484087 CSKP41240 450 aa7.03□□□□□ -1.28
BRCA1-216ENST00000484087 MAGEA6P43360 314 aa7.03□□□□□ -1.28
BRCA1-216ENST00000484087 TNFRSF4P43489 277 aa7.03□□□□□ -1.28
BRCA1-216ENST00000484087 STK19P49842 368 aaPredicted RBP7.03□□□□□ -1.28
BRCA1-216ENST00000484087 GEMIN4P57678 1058 aaKnown RBP7.03□□□□□ -1.28
BRCA1-216ENST00000484087 MRPS21P82921 87 aaKnown RBP7.03□□□□□ -1.28
BRCA1-216ENST00000484087 DMTNQ08495 405 aa7.03□□□□□ -1.28
BRCA1-216ENST00000484087 VAC14Q08AM6 782 aa7.03□□□□□ -1.28
BRCA1-216ENST00000484087 SLC10A2Q12908 348 aaPredicted RBP7.03□□□□□ -1.28
BRCA1-216ENST00000484087 SEMA3BQ13214 749 aa7.03□□□□□ -1.28
BRCA1-216ENST00000484087 EIF4EBP2Q13542 120 aaPredicted RBP7.03□□□□□ -1.28
BRCA1-216ENST00000484087 SEMA5AQ13591 1074 aa7.03□□□□□ -1.28
BRCA1-216ENST00000484087 AUHQ13825 339 aaKnown RBP7.03□□□□□ -1.28
BRCA1-216ENST00000484087 PRPSAP1Q14558 356 aa7.03□□□□□ -1.28
BRCA1-216ENST00000484087 PRKD1Q15139 912 aaPredicted RBP7.03□□□□□ -1.28
BRCA1-216ENST00000484087 PTPRNQ16849 979 aa7.03□□□□□ -1.28
BRCA1-216ENST00000484087 PARP6Q2NL67 630 aa7.03□□□□□ -1.28
BRCA1-216ENST00000484087 MPPE1Q53F39 396 aa7.03□□□□□ -1.28
BRCA1-216ENST00000484087 ANKRD22Q5VYY1 191 aa7.03□□□□□ -1.28
BRCA1-216ENST00000484087 NUGGCQ68CJ6 796 aa7.03□□□□□ -1.28
BRCA1-216ENST00000484087 KIAA1324Q6UXG2 1013 aaKnown RBP7.03□□□□□ -1.28
BRCA1-216ENST00000484087 C3orf62Q6ZUJ4 267 aa7.03□□□□□ -1.28
BRCA1-216ENST00000484087 B4GALNT4Q76KP1 1039 aa7.03□□□□□ -1.28
BRCA1-216ENST00000484087 ADIPOR2Q86V24 386 aa7.03□□□□□ -1.28
BRCA1-216ENST00000484087 RASSF3Q86WH2 238 aa7.03□□□□□ -1.28
BRCA1-216ENST00000484087 TDRPQ86YL5 185 aa7.03□□□□□ -1.28
BRCA1-216ENST00000484087 ANKMY2Q8IV38 441 aa7.03□□□□□ -1.28
BRCA1-216ENST00000484087 CCDC13Q8IYE1 715 aa7.03□□□□□ -1.28
BRCA1-216ENST00000484087 TMEFF1Q8IYR6 380 aa7.03□□□□□ -1.28
BRCA1-216ENST00000484087 KIAA1958Q8N8K9 716 aa7.03□□□□□ -1.28
BRCA1-216ENST00000484087 GAB3Q8WWW8 586 aa7.03□□□□□ -1.28
BRCA1-216ENST00000484087 ARHGEF2Q92974 986 aaKnown RBP7.03□□□□□ -1.28
BRCA1-216ENST00000484087 HDAC11Q96DB2 347 aa7.03□□□□□ -1.28
BRCA1-216ENST00000484087 TMA16Q96EY4 203 aaKnown RBP7.03□□□□□ -1.28
BRCA1-216ENST00000484087 RPL10LQ96L21 214 aaKnown RBP7.03□□□□□ -1.28
BRCA1-216ENST00000484087 PPP1R2P1Q96PQ5 205 aa7.03□□□□□ -1.28
BRCA1-216ENST00000484087 LGMNQ99538 433 aa7.03□□□□□ -1.28
BRCA1-216ENST00000484087 PRMT1Q99873 361 aaKnown RBP7.03□□□□□ -1.28
BRCA1-216ENST00000484087 MKRN2Q9H000 416 aaKnown RBP7.03□□□□□ -1.28
BRCA1-216ENST00000484087 DUSP15Q9H1R2 295 aaPredicted RBP7.03□□□□□ -1.28
BRCA1-216ENST00000484087 LRRC4CQ9HCJ2 640 aa7.03□□□□□ -1.28
BRCA1-216ENST00000484087 SENP1Q9P0U3 644 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms