RNA–Protein interactions for RNA: ENST00000483544.1

LINC00477-201, long intergenic non-protein coding RNA 477, humanhuman

TSL 2 BASIC

Gene LINC00477, Length 1,710 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477-201ENST00000483544 FAM161BQ96MY7 647 aa12.59□□□□□ -0.39
LINC00477-201ENST00000483544 TSNARE1Q96NA8 513 aa12.59□□□□□ -0.39
LINC00477-201ENST00000483544 RNF39Q9H2S5 420 aa12.59□□□□□ -0.39
LINC00477-201ENST00000483544 CSNK1G1Q9HCP0 422 aa12.59□□□□□ -0.39
LINC00477-201ENST00000483544 MRGBPQ9NV56 204 aa12.59□□□□□ -0.39
LINC00477-201ENST00000483544 ARMCX1Q9P291 453 aa12.59□□□□□ -0.39
LINC00477-201ENST00000483544 AAR2Q9Y312 384 aaKnown RBP12.59□□□□□ -0.39
LINC00477-201ENST00000483544 PATJQ8NI35 1801 aa12.59□□□□□ -0.39
LINC00477-201ENST00000483544 SLCO1B7G3V0H7 640 aa12.59□□□□□ -0.39
LINC00477-201ENST00000483544 CLDN5O00501 218 aa12.59□□□□□ -0.39
LINC00477-201ENST00000483544 AREL1O15033 823 aa12.59□□□□□ -0.39
LINC00477-201ENST00000483544 TREHO43280 583 aa12.59□□□□□ -0.39
LINC00477-201ENST00000483544 CACNG3O60359 315 aa12.59□□□□□ -0.39
LINC00477-201ENST00000483544 CCNT2O60583 730 aaKnown RBP12.59□□□□□ -0.39
LINC00477-201ENST00000483544 TSPAN9O75954 239 aa12.59□□□□□ -0.39
LINC00477-201ENST00000483544 THP07101 528 aa12.59□□□□□ -0.39
LINC00477-201ENST00000483544 HOXB1P14653 301 aaPredicted RBP12.59□□□□□ -0.39
LINC00477-201ENST00000483544 IFNA8P32881 189 aa12.59□□□□□ -0.39
LINC00477-201ENST00000483544 CDK9P50750 372 aaKnown RBP12.59□□□□□ -0.39
LINC00477-201ENST00000483544 RPL10AP62906 217 aaKnown RBP12.59□□□□□ -0.39
LINC00477-201ENST00000483544 CDH17Q12864 832 aa12.59□□□□□ -0.39
LINC00477-201ENST00000483544 HIC1Q14526 733 aa12.59□□□□□ -0.39
LINC00477-201ENST00000483544 PCSK7Q16549 785 aa12.59□□□□□ -0.39
LINC00477-201ENST00000483544 RGS21Q2M5E4 152 aa12.59□□□□□ -0.39
LINC00477-201ENST00000483544 ANO4Q32M45 955 aa12.59□□□□□ -0.39
LINC00477-201ENST00000483544 SYPL2Q5VXT5 272 aa12.59□□□□□ -0.39
LINC00477-201ENST00000483544 POTEHQ6S545 545 aa12.59□□□□□ -0.39
LINC00477-201ENST00000483544 DGLUCYQ7Z3D6 616 aa12.59□□□□□ -0.39
LINC00477-201ENST00000483544 CLEC14AQ86T13 490 aa12.59□□□□□ -0.39
LINC00477-201ENST00000483544 HEATR4Q86WZ0 1026 aa12.59□□□□□ -0.39
LINC00477-201ENST00000483544 C10orf107Q8IVU9 208 aa12.59□□□□□ -0.39
LINC00477-201ENST00000483544 ULK2Q8IYT8 1036 aa12.59□□□□□ -0.39
LINC00477-201ENST00000483544 CARNMT1Q8N4J0 409 aa12.59□□□□□ -0.39
LINC00477-201ENST00000483544 MINDY2Q8NBR6 621 aa12.59□□□□□ -0.39
LINC00477-201ENST00000483544 PDZD8Q8NEN9 1154 aa12.59□□□□□ -0.39
LINC00477-201ENST00000483544 ZFP28Q8NHY6 868 aa12.59□□□□□ -0.39
LINC00477-201ENST00000483544 ZNF669Q96BR6 464 aaPredicted RBP12.59□□□□□ -0.39
LINC00477-201ENST00000483544 TEKT5Q96M29 485 aa12.59□□□□□ -0.39
LINC00477-201ENST00000483544 COLEC11Q9BWP8 271 aa12.59□□□□□ -0.39
LINC00477-201ENST00000483544 MAGEB5Q9BZ81 275 aa12.59□□□□□ -0.39
LINC00477-201ENST00000483544 ZNF696Q9H7X3 374 aa12.59□□□□□ -0.39
LINC00477-201ENST00000483544 MRM3Q9HC36 420 aaKnown RBP12.59□□□□□ -0.39
LINC00477-201ENST00000483544 TRNAU1APQ9NX07 287 aaKnown RBP12.59□□□□□ -0.39
LINC00477-201ENST00000483544 NDE1Q9NXR1 346 aa12.59□□□□□ -0.39
LINC00477-201ENST00000483544 FNIP2Q9P278 1114 aa12.59□□□□□ -0.39
LINC00477-201ENST00000483544 ANGPTL3Q9Y5C1 460 aa12.59□□□□□ -0.39
LINC00477-201ENST00000483544 TRPV2Q9Y5S1 764 aa12.59□□□□□ -0.39
LINC00477-201ENST00000483544 SHROOM3Q8TF72 1996 aa12.58□□□□□ -0.4
LINC00477-201ENST00000483544 TRPM7Q96QT4 1865 aa12.58□□□□□ -0.4
LINC00477-201ENST00000483544 ZCWPW2A0A1B0GU75 182 aa12.58□□□□□ -0.4
LINC00477-201ENST00000483544 C2orf71A6NGG8 1288 aa12.58□□□□□ -0.4
LINC00477-201ENST00000483544 PRR5-ARHGAP8B1AHC4 643 aa12.58□□□□□ -0.4
LINC00477-201ENST00000483544 ZNF701M0R085 212 aaPredicted RBP12.58□□□□□ -0.4
LINC00477-201ENST00000483544 ANXA9O76027 345 aa12.58□□□□□ -0.4
LINC00477-201ENST00000483544 BEST1O76090 585 aa12.58□□□□□ -0.4
LINC00477-201ENST00000483544 FYNP06241 537 aa12.58□□□□□ -0.4
LINC00477-201ENST00000483544 KITP10721 976 aa12.58□□□□□ -0.4
LINC00477-201ENST00000483544 DDX5P17844 614 aaKnown RBP12.58□□□□□ -0.4
LINC00477-201ENST00000483544 POLR2CP19387 275 aaPredicted RBP12.58□□□□□ -0.4
LINC00477-201ENST00000483544 ACAT1P24752 427 aaKnown RBP12.58□□□□□ -0.4
LINC00477-201ENST00000483544 IDH3AP50213 366 aa12.58□□□□□ -0.4
LINC00477-201ENST00000483544 COPAP53621 1224 aa12.58□□□□□ -0.4
LINC00477-201ENST00000483544 ALDH18A1P54886 795 aaKnown RBP12.58□□□□□ -0.4
LINC00477-201ENST00000483544 NR1H2P55055 460 aa12.58□□□□□ -0.4
LINC00477-201ENST00000483544 ARHGAP8P85298 464 aa12.58□□□□□ -0.4
LINC00477-201ENST00000483544 THOC5Q13769 683 aaKnown RBP12.58□□□□□ -0.4
LINC00477-201ENST00000483544 MAPRE1Q15691 268 aaKnown RBP12.58□□□□□ -0.4
LINC00477-201ENST00000483544 NADK2Q4G0N4 442 aa12.58□□□□□ -0.4
LINC00477-201ENST00000483544 BRMS1LQ5PSV4 323 aa12.58□□□□□ -0.4
LINC00477-201ENST00000483544 SPRYD7Q5W111 196 aa12.58□□□□□ -0.4
LINC00477-201ENST00000483544 FAM117BQ6P1L5 589 aa12.58□□□□□ -0.4
LINC00477-201ENST00000483544 STRA8Q7Z7C7 330 aa12.58□□□□□ -0.4
LINC00477-201ENST00000483544 SETD3Q86TU7 594 aaPredicted RBP12.58□□□□□ -0.4
LINC00477-201ENST00000483544 METTL23Q86XA0 190 aa12.58□□□□□ -0.4
LINC00477-201ENST00000483544 CENPSQ8N2Z9 138 aa12.58□□□□□ -0.4
LINC00477-201ENST00000483544 MARVELD2Q8N4S9 558 aa12.58□□□□□ -0.4
LINC00477-201ENST00000483544 DNAAF3Q8N9W5 541 aa12.58□□□□□ -0.4
LINC00477-201ENST00000483544 OR52K1Q8NGK4 314 aa12.58□□□□□ -0.4
LINC00477-201ENST00000483544 BRSK1Q8TDC3 778 aa12.58□□□□□ -0.4
LINC00477-201ENST00000483544 LRRN4Q8WUT4 740 aa12.58□□□□□ -0.4
LINC00477-201ENST00000483544 RASSF5Q8WWW0 418 aa12.58□□□□□ -0.4
LINC00477-201ENST00000483544 SORT1Q99523 831 aa12.58□□□□□ -0.4
LINC00477-201ENST00000483544 SMOQ99835 787 aa12.58□□□□□ -0.4
LINC00477-201ENST00000483544 TRIM56Q9BRZ2 755 aaKnown RBP12.58□□□□□ -0.4
LINC00477-201ENST00000483544 KIFC1Q9BW19 673 aa12.58□□□□□ -0.4
LINC00477-201ENST00000483544 C20orf27Q9GZN8 174 aa12.58□□□□□ -0.4
LINC00477-201ENST00000483544 SENP6Q9GZR1 1112 aaPredicted RBP12.58□□□□□ -0.4
LINC00477-201ENST00000483544 WDCPQ9H6R7 721 aa12.58□□□□□ -0.4
LINC00477-201ENST00000483544 CRTAC1Q9NQ79 661 aa12.58□□□□□ -0.4
LINC00477-201ENST00000483544 DDIT4Q9NX09 232 aa12.58□□□□□ -0.4
LINC00477-201ENST00000483544 ARPC4-TTLL3A0A0A6YYG9 625 aa12.57□□□□□ -0.4
LINC00477-201ENST00000483544 B8ZZF3 427 aa12.57□□□□□ -0.4
LINC00477-201ENST00000483544 HHLA1C9JL84 531 aa12.57□□□□□ -0.4
LINC00477-201ENST00000483544 NRP1O14786 923 aa12.57□□□□□ -0.4
LINC00477-201ENST00000483544 FGF10O15520 208 aaPredicted RBP12.57□□□□□ -0.4
LINC00477-201ENST00000483544 TRIM13O60858 407 aa12.57□□□□□ -0.4
LINC00477-201ENST00000483544 TMCC2O75069 709 aa12.57□□□□□ -0.4
LINC00477-201ENST00000483544 CYP11A1P05108 521 aa12.57□□□□□ -0.4
LINC00477-201ENST00000483544 PRKCGP05129 697 aa12.57□□□□□ -0.4
LINC00477-201ENST00000483544 MYL3P08590 195 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms