RNA–Protein interactions for RNA: ENST00000483443.1

LRRFIP1-212, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 3

Gene LRRFIP1, Length 1,069 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-212ENST00000483443 CCDC74AQ96AQ1 378 aa13.01□□□□□ -0.33
LRRFIP1-212ENST00000483443 TMEM74Q96NL1 305 aa13.01□□□□□ -0.33
LRRFIP1-212ENST00000483443 ARHGAP9Q9BRR9 750 aa13.01□□□□□ -0.33
LRRFIP1-212ENST00000483443 WRAP53Q9BUR4 548 aaKnown RBP13.01□□□□□ -0.33
LRRFIP1-212ENST00000483443 FAM117AQ9C073 453 aa13.01□□□□□ -0.33
LRRFIP1-212ENST00000483443 TTYH3Q9C0H2 523 aa13.01□□□□□ -0.33
LRRFIP1-212ENST00000483443 CLPBQ9H078 707 aa13.01□□□□□ -0.33
LRRFIP1-212ENST00000483443 NDFIP2Q9NV92 336 aa13.01□□□□□ -0.33
LRRFIP1-212ENST00000483443 SIRPGQ9P1W8 387 aa13.01□□□□□ -0.33
LRRFIP1-212ENST00000483443 DKK3Q9UBP4 350 aa13.01□□□□□ -0.33
LRRFIP1-212ENST00000483443 DACH1Q9UI36 760 aa13.01□□□□□ -0.33
LRRFIP1-212ENST00000483443 PCDHGA7Q9Y5G6 932 aa13.01□□□□□ -0.33
LRRFIP1-212ENST00000483443 D6RAR5 112 aa13□□□□□ -0.33
LRRFIP1-212ENST00000483443 F8VZ95 297 aa13□□□□□ -0.33
LRRFIP1-212ENST00000483443 LRIG2O94898 1065 aa13□□□□□ -0.33
LRRFIP1-212ENST00000483443 PLEKP08567 350 aaPredicted RBP13□□□□□ -0.33
LRRFIP1-212ENST00000483443 UCHL3P15374 230 aa13□□□□□ -0.33
LRRFIP1-212ENST00000483443 PDX1P52945 283 aa13□□□□□ -0.33
LRRFIP1-212ENST00000483443 EMP3P54852 163 aa13□□□□□ -0.33
LRRFIP1-212ENST00000483443 INHBCP55103 352 aa13□□□□□ -0.33
LRRFIP1-212ENST00000483443 GRM3Q14832 879 aa13□□□□□ -0.33
LRRFIP1-212ENST00000483443 IRF4Q15306 451 aa13□□□□□ -0.33
LRRFIP1-212ENST00000483443 C15orf59Q2T9L4 293 aaPredicted RBP13□□□□□ -0.33
LRRFIP1-212ENST00000483443 INO80DQ53TQ3 878 aaPredicted RBP13□□□□□ -0.33
LRRFIP1-212ENST00000483443 ERAP2Q6P179 960 aa13□□□□□ -0.33
LRRFIP1-212ENST00000483443 XKR5Q6UX68 686 aa13□□□□□ -0.33
LRRFIP1-212ENST00000483443 KYQ8NBH2 561 aa13□□□□□ -0.33
LRRFIP1-212ENST00000483443 RXFP2Q8WXD0 754 aa13□□□□□ -0.33
LRRFIP1-212ENST00000483443 KRTAP3-3Q9BYR6 98 aa13□□□□□ -0.33
LRRFIP1-212ENST00000483443 KRTAP3-2Q9BYR7 98 aa13□□□□□ -0.33
LRRFIP1-212ENST00000483443 STK33Q9BYT3 514 aa13□□□□□ -0.33
LRRFIP1-212ENST00000483443 CPEB1Q9BZB8 566 aaKnown RBP13□□□□□ -0.33
LRRFIP1-212ENST00000483443 EDEM3Q9BZQ6 932 aa13□□□□□ -0.33
LRRFIP1-212ENST00000483443 MBNL1Q9NR56 388 aaKnown RBP13□□□□□ -0.33
LRRFIP1-212ENST00000483443 SEPT10Q9P0V9 454 aa13□□□□□ -0.33
LRRFIP1-212ENST00000483443 KLQ9UEF7 1012 aa13□□□□□ -0.33
LRRFIP1-212ENST00000483443 GPR34Q9UPC5 381 aa13□□□□□ -0.33
LRRFIP1-212ENST00000483443 MFHAS1Q9Y4C4 1052 aa13□□□□□ -0.33
LRRFIP1-212ENST00000483443 PMS2P1A4D2B8 440 aa12.99□□□□□ -0.33
LRRFIP1-212ENST00000483443 RPLP0P05388 317 aaKnown RBP12.99□□□□□ -0.33
LRRFIP1-212ENST00000483443 DESP17661 470 aa12.99□□□□□ -0.33
LRRFIP1-212ENST00000483443 MMP8P22894 467 aa12.99□□□□□ -0.33
LRRFIP1-212ENST00000483443 EPHB2P29323 1055 aa12.99□□□□□ -0.33
LRRFIP1-212ENST00000483443 SLC5A2P31639 672 aa12.99□□□□□ -0.33
LRRFIP1-212ENST00000483443 UGT1A5P35504 534 aa12.99□□□□□ -0.33
LRRFIP1-212ENST00000483443 PTPN9P43378 593 aa12.99□□□□□ -0.33
LRRFIP1-212ENST00000483443 UBE2HP62256 183 aa12.99□□□□□ -0.33
LRRFIP1-212ENST00000483443 NFATC4Q14934 902 aa12.99□□□□□ -0.33
LRRFIP1-212ENST00000483443 PARP15Q460N3 678 aa12.99□□□□□ -0.33
LRRFIP1-212ENST00000483443 CCDC14Q49A88 953 aa12.99□□□□□ -0.33
LRRFIP1-212ENST00000483443 EFHC2Q5JST6 749 aa12.99□□□□□ -0.33
LRRFIP1-212ENST00000483443 MIIPQ5JXC2 388 aa12.99□□□□□ -0.33
LRRFIP1-212ENST00000483443 ENPP7Q6UWV6 458 aa12.99□□□□□ -0.33
LRRFIP1-212ENST00000483443 TRIM72Q6ZMU5 477 aa12.99□□□□□ -0.33
LRRFIP1-212ENST00000483443 USP53Q70EK8 1073 aa12.99□□□□□ -0.33
LRRFIP1-212ENST00000483443 RD3Q7Z3Z2 195 aa12.99□□□□□ -0.33
LRRFIP1-212ENST00000483443 DNAAF5Q86Y56 855 aa12.99□□□□□ -0.33
LRRFIP1-212ENST00000483443 FAM172AQ8WUF8 416 aa12.99□□□□□ -0.33
LRRFIP1-212ENST00000483443 NTAN1Q96AB6 310 aa12.99□□□□□ -0.33
LRRFIP1-212ENST00000483443 TMEM159Q96B96 161 aa12.99□□□□□ -0.33
LRRFIP1-212ENST00000483443 PNMA8BQ9ULN7 279 aaPredicted RBP12.99□□□□□ -0.33
LRRFIP1-212ENST00000483443 NEU3Q9UQ49 428 aa12.99□□□□□ -0.33
LRRFIP1-212ENST00000483443 COL6A6A6NMZ7 2263 aa12.99□□□□□ -0.33
LRRFIP1-212ENST00000483443 DOCK4Q8N1I0 1966 aa12.98□□□□□ -0.33
LRRFIP1-212ENST00000483443 ANKRD62A6NC57 917 aa12.98□□□□□ -0.33
LRRFIP1-212ENST00000483443 C2CD4BA6NLJ0 364 aa12.98□□□□□ -0.33
LRRFIP1-212ENST00000483443 FAM72CH0Y354 149 aa12.98□□□□□ -0.33
LRRFIP1-212ENST00000483443 WISP1O95388 367 aa12.98□□□□□ -0.33
LRRFIP1-212ENST00000483443 TNFP01375 233 aa12.98□□□□□ -0.33
LRRFIP1-212ENST00000483443 CELA2BP08218 269 aaPredicted RBP12.98□□□□□ -0.33
LRRFIP1-212ENST00000483443 LIPCP11150 499 aa12.98□□□□□ -0.33
LRRFIP1-212ENST00000483443 KRT3P12035 628 aa12.98□□□□□ -0.33
LRRFIP1-212ENST00000483443 CCKBRP32239 447 aa12.98□□□□□ -0.33
LRRFIP1-212ENST00000483443 NSFP46459 744 aaKnown RBP12.98□□□□□ -0.33
LRRFIP1-212ENST00000483443 YBEYP58557 167 aaPredicted RBP12.98□□□□□ -0.33
LRRFIP1-212ENST00000483443 SRP54P61011 504 aaKnown RBP12.98□□□□□ -0.33
LRRFIP1-212ENST00000483443 CCL7P80098 99 aa12.98□□□□□ -0.33
LRRFIP1-212ENST00000483443 CDR2Q01850 454 aa12.98□□□□□ -0.33
LRRFIP1-212ENST00000483443 TCEA2Q15560 299 aa12.98□□□□□ -0.33
LRRFIP1-212ENST00000483443 ALG11Q2TAA5 492 aa12.98□□□□□ -0.33
LRRFIP1-212ENST00000483443 TMEM52BQ4KMG9 183 aa12.98□□□□□ -0.33
LRRFIP1-212ENST00000483443 HSP90AA4PQ58FG1 418 aa12.98□□□□□ -0.33
LRRFIP1-212ENST00000483443 FAM72AQ5TYM5 149 aa12.98□□□□□ -0.33
LRRFIP1-212ENST00000483443 FAM72DQ6L9T8 149 aa12.98□□□□□ -0.33
LRRFIP1-212ENST00000483443 SLFN11Q7Z7L1 901 aa12.98□□□□□ -0.33
LRRFIP1-212ENST00000483443 B3GNT8Q7Z7M8 397 aa12.98□□□□□ -0.33
LRRFIP1-212ENST00000483443 FAM72BQ86X60 149 aa12.98□□□□□ -0.33
LRRFIP1-212ENST00000483443 CCNJLQ8IV13 435 aa12.98□□□□□ -0.33
LRRFIP1-212ENST00000483443 PAF1Q8N7H5 531 aa12.98□□□□□ -0.33
LRRFIP1-212ENST00000483443 RTL3Q8N8U3 475 aaKnown RBP12.98□□□□□ -0.33
LRRFIP1-212ENST00000483443 ZSCAN1Q8NBB4 408 aa12.98□□□□□ -0.33
LRRFIP1-212ENST00000483443 GPT2Q8TD30 523 aa12.98□□□□□ -0.33
LRRFIP1-212ENST00000483443 HCAR2Q8TDS4 363 aa12.98□□□□□ -0.33
LRRFIP1-212ENST00000483443 TSACCQ96A04 125 aaPredicted RBP12.98□□□□□ -0.33
LRRFIP1-212ENST00000483443 SGF29Q96ES7 293 aa12.98□□□□□ -0.33
LRRFIP1-212ENST00000483443 C11orf70Q9BRQ4 267 aa12.98□□□□□ -0.33
LRRFIP1-212ENST00000483443 APOOQ9BUR5 198 aa12.98□□□□□ -0.33
LRRFIP1-212ENST00000483443 SELENOOQ9BVL4 669 aa12.98□□□□□ -0.33
LRRFIP1-212ENST00000483443 NAA15Q9BXJ9 866 aaKnown RBP12.98□□□□□ -0.33
LRRFIP1-212ENST00000483443 FOXP3Q9BZS1 431 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms