RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 C2CD4AQ8NCU7 369 aaPredicted RBP10.89□□□□□ -0.67
VPS52-217ENST00000478934 OR13J1Q8NGT2 312 aa10.89□□□□□ -0.67
VPS52-217ENST00000478934 DCUN1D1Q96GG9 259 aa10.89□□□□□ -0.67
VPS52-217ENST00000478934 SLC45A3Q96JT2 553 aa10.89□□□□□ -0.67
VPS52-217ENST00000478934 CNBD2Q96M20 576 aa10.89□□□□□ -0.67
VPS52-217ENST00000478934 SMIM14Q96QK8 99 aa10.89□□□□□ -0.67
VPS52-217ENST00000478934 CATSPERBQ9H7T0 1116 aa10.89□□□□□ -0.67
VPS52-217ENST00000478934 GMIPQ9P107 970 aa10.89□□□□□ -0.67
VPS52-217ENST00000478934 PDP2Q9P2J9 529 aa10.89□□□□□ -0.67
VPS52-217ENST00000478934 GMPR2Q9P2T1 348 aaKnown RBP10.89□□□□□ -0.67
VPS52-217ENST00000478934 APPL1Q9UKG1 709 aa10.89□□□□□ -0.67
VPS52-217ENST00000478934 CDYLQ9Y232 598 aa10.89□□□□□ -0.67
VPS52-217ENST00000478934 ANKRD6Q9Y2G4 727 aa10.89□□□□□ -0.67
VPS52-217ENST00000478934 PPP6CO00743 305 aa10.89□□□□□ -0.67
VPS52-217ENST00000478934 SLC4A1P02730 911 aa10.89□□□□□ -0.67
VPS52-217ENST00000478934 MMP2P08253 660 aa10.89□□□□□ -0.67
VPS52-217ENST00000478934 CCDC166P0CW27 439 aa10.89□□□□□ -0.67
VPS52-217ENST00000478934 CYBAP13498 195 aa10.89□□□□□ -0.67
VPS52-217ENST00000478934 ATP6V1B1P15313 513 aa10.89□□□□□ -0.67
VPS52-217ENST00000478934 NELFEP18615 380 aaKnown RBP10.89□□□□□ -0.67
VPS52-217ENST00000478934 FGFR3P22607 806 aa10.89□□□□□ -0.67
VPS52-217ENST00000478934 GEMP55040 296 aa10.89□□□□□ -0.67
VPS52-217ENST00000478934 CDKN2DP55273 166 aa10.89□□□□□ -0.67
VPS52-217ENST00000478934 DSC3Q14574 896 aa10.89□□□□□ -0.67
VPS52-217ENST00000478934 LIN52Q52LA3 116 aa10.89□□□□□ -0.67
VPS52-217ENST00000478934 CLEC6AQ6EIG7 209 aa10.89□□□□□ -0.67
VPS52-217ENST00000478934 LAYNQ6UX15 382 aa10.89□□□□□ -0.67
VPS52-217ENST00000478934 ACAD11Q709F0 780 aa10.89□□□□□ -0.67
VPS52-217ENST00000478934 KLHDC8BQ8IXV7 354 aa10.89□□□□□ -0.67
VPS52-217ENST00000478934 THEM5Q8N1Q8 247 aa10.89□□□□□ -0.67
VPS52-217ENST00000478934 PGBD5Q8N414 524 aa10.89□□□□□ -0.67
VPS52-217ENST00000478934 KYQ8NBH2 561 aa10.89□□□□□ -0.67
VPS52-217ENST00000478934 ICA1LQ8NDH6 482 aa10.89□□□□□ -0.67
VPS52-217ENST00000478934 OR6P1Q8NGX9 317 aa10.89□□□□□ -0.67
VPS52-217ENST00000478934 HMGCLL1Q8TB92 370 aa10.89□□□□□ -0.67
VPS52-217ENST00000478934 SREK1Q8WXA9 508 aaKnown RBP10.89□□□□□ -0.67
VPS52-217ENST00000478934 EXT2Q93063 718 aa10.89□□□□□ -0.67
VPS52-217ENST00000478934 PCDHAC1Q9H158 963 aa10.89□□□□□ -0.67
VPS52-217ENST00000478934 SEMA6AQ9H2E6 1030 aa10.89□□□□□ -0.67
VPS52-217ENST00000478934 FAM96AQ9H5X1 160 aa10.89□□□□□ -0.67
VPS52-217ENST00000478934 ZNF385DQ9H6B1 395 aa10.89□□□□□ -0.67
VPS52-217ENST00000478934 UBAP1Q9NZ09 502 aa10.89□□□□□ -0.67
VPS52-217ENST00000478934 CLIC5Q9NZA1 410 aa10.89□□□□□ -0.67
VPS52-217ENST00000478934 DTNAQ9Y4J8 743 aa10.89□□□□□ -0.67
VPS52-217ENST00000478934 TRPM7Q96QT4 1865 aa10.89□□□□□ -0.67
VPS52-217ENST00000478934 A0A1B0GTW7 788 aa10.88□□□□□ -0.67
VPS52-217ENST00000478934 TCAF2A6NFQ2 919 aa10.88□□□□□ -0.67
VPS52-217ENST00000478934 LRRC14BA6NHZ5 514 aa10.88□□□□□ -0.67
VPS52-217ENST00000478934 SDHDO14521 159 aa10.88□□□□□ -0.67
VPS52-217ENST00000478934 UBFD1O14562 309 aaKnown RBP10.88□□□□□ -0.67
VPS52-217ENST00000478934 ZNF623O75123 536 aa10.88□□□□□ -0.67
VPS52-217ENST00000478934 THRAP10827 490 aa10.88□□□□□ -0.67
VPS52-217ENST00000478934 HOXC13P31276 330 aa10.88□□□□□ -0.67
VPS52-217ENST00000478934 PPARGP37231 505 aaPredicted RBP10.88□□□□□ -0.67
VPS52-217ENST00000478934 OR1G1P47890 313 aa10.88□□□□□ -0.67
VPS52-217ENST00000478934 SULT2A1Q06520 285 aa10.88□□□□□ -0.67
VPS52-217ENST00000478934 BRMS1LQ5PSV4 323 aa10.88□□□□□ -0.67
VPS52-217ENST00000478934 C6orf52Q5T4I8 152 aa10.88□□□□□ -0.67
VPS52-217ENST00000478934 RAP1GAP2Q684P5 730 aa10.88□□□□□ -0.67
VPS52-217ENST00000478934 IFNL1Q8IU54 200 aa10.88□□□□□ -0.67
VPS52-217ENST00000478934 HDAC10Q969S8 669 aa10.88□□□□□ -0.67
VPS52-217ENST00000478934 NMD3Q96D46 503 aaKnown RBP10.88□□□□□ -0.67
VPS52-217ENST00000478934 SUSD3Q96L08 255 aa10.88□□□□□ -0.67
VPS52-217ENST00000478934 KLHL32Q96NJ5 620 aa10.88□□□□□ -0.67
VPS52-217ENST00000478934 MRPL46Q9H2W6 279 aaKnown RBP10.88□□□□□ -0.67
VPS52-217ENST00000478934 ENTPD7Q9NQZ7 604 aa10.88□□□□□ -0.67
VPS52-217ENST00000478934 GIMAP2Q9UG22 337 aa10.88□□□□□ -0.67
VPS52-217ENST00000478934 PTGDR2Q9Y5Y4 395 aa10.88□□□□□ -0.67
VPS52-217ENST00000478934 MIA3Q5JRA6 1907 aa10.88□□□□□ -0.67
VPS52-217ENST00000478934 ZNF236Q9UL36 1845 aa10.88□□□□□ -0.67
VPS52-217ENST00000478934 C15orf38-AP3S2A0A0A6YYH1 394 aa10.88□□□□□ -0.67
VPS52-217ENST00000478934 MUSKO15146 869 aa10.88□□□□□ -0.67
VPS52-217ENST00000478934 CSPG5O95196 566 aa10.88□□□□□ -0.67
VPS52-217ENST00000478934 ELNP15502 786 aa10.88□□□□□ -0.67
VPS52-217ENST00000478934 PMLP29590 882 aa10.88□□□□□ -0.67
VPS52-217ENST00000478934 ACVRL1P37023 503 aa10.88□□□□□ -0.67
VPS52-217ENST00000478934 FLT3LGP49771 235 aa10.88□□□□□ -0.67
VPS52-217ENST00000478934 SLC12A2P55011 1212 aa10.88□□□□□ -0.67
VPS52-217ENST00000478934 RALGDSQ12967 914 aa10.88□□□□□ -0.67
VPS52-217ENST00000478934 HNRNPDQ14103 355 aaKnown RBP10.88□□□□□ -0.67
VPS52-217ENST00000478934 ZNF423Q2M1K9 1284 aa10.88□□□□□ -0.67
VPS52-217ENST00000478934 MS4A13Q5J8X5 152 aa10.88□□□□□ -0.67
VPS52-217ENST00000478934 GPR158Q5T848 1215 aa10.88□□□□□ -0.67
VPS52-217ENST00000478934 METTL21CQ5VZV1 264 aa10.88□□□□□ -0.67
VPS52-217ENST00000478934 AFMIDQ63HM1 303 aa10.88□□□□□ -0.67
VPS52-217ENST00000478934 IYDQ6PHW0 289 aa10.88□□□□□ -0.67
VPS52-217ENST00000478934 POTEHQ6S545 545 aa10.88□□□□□ -0.67
VPS52-217ENST00000478934 BNC2Q6ZN30 1099 aaPredicted RBP10.88□□□□□ -0.67
VPS52-217ENST00000478934 ARPINQ7Z6K5 226 aa10.88□□□□□ -0.67
VPS52-217ENST00000478934 PQLC1Q8N2U9 271 aa10.88□□□□□ -0.67
VPS52-217ENST00000478934 RYBPQ8N488 228 aaPredicted RBP10.88□□□□□ -0.67
VPS52-217ENST00000478934 OR9I1Q8NGQ6 314 aa10.88□□□□□ -0.67
VPS52-217ENST00000478934 SPATA16Q9BXB7 569 aa10.88□□□□□ -0.67
VPS52-217ENST00000478934 ALG9Q9H6U8 611 aa10.88□□□□□ -0.67
VPS52-217ENST00000478934 WDR41Q9HAD4 459 aa10.88□□□□□ -0.67
VPS52-217ENST00000478934 FBRSL1Q9HCM7 1045 aaKnown RBP10.88□□□□□ -0.67
VPS52-217ENST00000478934 A8MT66 165 aa10.88□□□□□ -0.67
VPS52-217ENST00000478934 C9JVG2 144 aa10.88□□□□□ -0.67
VPS52-217ENST00000478934 FGF10O15520 208 aaPredicted RBP10.88□□□□□ -0.67
VPS52-217ENST00000478934 APOA4P06727 396 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms