RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 BMP3P12645 472 aa5.46□□□□□ -1.53
USF3-202ENST00000478658 RPL7P18124 248 aaKnown RBP5.46□□□□□ -1.53
USF3-202ENST00000478658 CYP2C18P33260 490 aa5.46□□□□□ -1.53
USF3-202ENST00000478658 GGCXP38435 758 aa5.46□□□□□ -1.53
USF3-202ENST00000478658 GP5P40197 560 aa5.46□□□□□ -1.53
USF3-202ENST00000478658 SULT1E1P49888 294 aa5.46□□□□□ -1.53
USF3-202ENST00000478658 KCNMA1Q12791 1236 aa5.46□□□□□ -1.53
USF3-202ENST00000478658 PABPC1LQ4VXU2 614 aaKnown RBP5.46□□□□□ -1.53
USF3-202ENST00000478658 PKDCCQ504Y2 493 aa5.46□□□□□ -1.53
USF3-202ENST00000478658 LRIG3Q6UXM1 1119 aa5.46□□□□□ -1.53
USF3-202ENST00000478658 SCUBE3Q8IX30 993 aa5.46□□□□□ -1.53
USF3-202ENST00000478658 SNX33Q8WV41 574 aa5.46□□□□□ -1.53
USF3-202ENST00000478658 TNFAIP8L1Q8WVP5 186 aa5.46□□□□□ -1.53
USF3-202ENST00000478658 BHMTQ93088 406 aa5.46□□□□□ -1.53
USF3-202ENST00000478658 BPIFA2Q96DR5 249 aa5.46□□□□□ -1.53
USF3-202ENST00000478658 FAM89AQ96GI7 184 aa5.46□□□□□ -1.53
USF3-202ENST00000478658 KLHL32Q96NJ5 620 aa5.46□□□□□ -1.53
USF3-202ENST00000478658 ARHGAP9Q9BRR9 750 aa5.46□□□□□ -1.53
USF3-202ENST00000478658 TDRD1Q9BXT4 1180 aaKnown RBP5.46□□□□□ -1.53
USF3-202ENST00000478658 NIFKQ9BYG3 293 aaKnown RBP5.46□□□□□ -1.53
USF3-202ENST00000478658 DCTPP1Q9H773 170 aa5.46□□□□□ -1.53
USF3-202ENST00000478658 IPPKQ9H8X2 491 aa5.46□□□□□ -1.53
USF3-202ENST00000478658 TMEM45AQ9NWC5 275 aa5.46□□□□□ -1.53
USF3-202ENST00000478658 TMEM260Q9NX78 707 aa5.46□□□□□ -1.53
USF3-202ENST00000478658 DNMT3LQ9UJW3 386 aa5.46□□□□□ -1.53
USF3-202ENST00000478658 HEY1Q9Y5J3 304 aa5.46□□□□□ -1.53
USF3-202ENST00000478658 FTCDNL1E5RQL4 147 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 PRKD3O94806 890 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 LARGE1O95461 756 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 CRABP2P29373 138 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 ACTR1AP61163 376 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 OTUD4Q01804 1114 aaKnown RBP5.46□□□□□ -1.54
USF3-202ENST00000478658 SP3Q02447 781 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 ABRAXAS2Q15018 415 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 PCBP1Q15365 356 aaKnown RBP eCLIP5.46□□□□□ -1.54
USF3-202ENST00000478658 RAB30Q15771 203 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 CERCAMQ5T4B2 595 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 NATD1Q8N6N6 113 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 OR52K2Q8NGK3 314 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 P2RX5Q93086 422 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 MALSU1Q96EH3 234 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 FAM20AQ96MK3 541 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 TRAPPC9Q96Q05 1148 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 TAPBPLQ9BX59 468 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 BHMT2Q9H2M3 363 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 PTCH2Q9Y6C5 1203 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 SMARCA4P51532 1647 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 ABCC1P33527 1531 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.46□□□□□ -1.54
USF3-202ENST00000478658 PPP1R3GB7ZBB8 358 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 AGRPO00253 132 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 RNGTTO60942 597 aaKnown RBP5.46□□□□□ -1.54
USF3-202ENST00000478658 CLN5O75503 358 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 ANGPTL1O95841 491 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 HCKP08631 526 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 AMD1P17707 334 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 MASP1P48740 699 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 PPP1R15BQ5SWA1 713 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 TICAM1Q8IUC6 712 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 DIS3L2Q8IYB7 885 aaKnown RBP5.46□□□□□ -1.54
USF3-202ENST00000478658 GTF2H4Q92759 462 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 FAM120BQ96EK7 910 aaKnown RBP5.46□□□□□ -1.54
USF3-202ENST00000478658 VCPIP1Q96JH7 1222 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 TSPAN18Q96SJ8 248 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 BTBD2Q9BX70 525 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 DNAJC5Q9H3Z4 198 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 PATZ1Q9HBE1 687 aaKnown RBP5.46□□□□□ -1.54
USF3-202ENST00000478658 NUP50Q9UKX7 468 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 KIAA1024Q9UPX6 916 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 ZNF335Q9H4Z2 1342 aaPredicted RBP5.46□□□□□ -1.54
USF3-202ENST00000478658 KIF20BQ96Q89 1820 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 TTC3P53804 2025 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 CLDN4O14493 209 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 FABP1P07148 127 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 SNRPAP09012 282 aaKnown RBP5.46□□□□□ -1.54
USF3-202ENST00000478658 FUT4P22083 530 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 AMPD1P23109 780 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 TNFSF4P23510 183 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 GADD45AP24522 165 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 RCAN1P53805 252 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 USP10Q14694 798 aaKnown RBP5.46□□□□□ -1.54
USF3-202ENST00000478658 SLC15A2Q16348 729 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 FBXO47Q5MNV8 452 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 CCNJQ5T5M9 372 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 AGAP7PQ5VUJ5 663 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 AGAP6Q5VW22 663 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 LIPKQ5VXJ0 399 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 TSHZ3Q63HK5 1081 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 UNC13DQ70J99 1090 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 NLRP8Q86W28 1048 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 DHX40Q8IX18 779 aaKnown RBP5.46□□□□□ -1.54
USF3-202ENST00000478658 ZNF283Q8N7M2 679 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 DNAJB14Q8TBM8 379 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 AGAP4Q96P64 663 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 ANKEF1Q9NU02 776 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 RCOR3Q9P2K3 495 aaPredicted RBP5.46□□□□□ -1.54
USF3-202ENST00000478658 NUFIP1Q9UHK0 495 aaKnown RBP5.46□□□□□ -1.54
USF3-202ENST00000478658 GNPTGQ9UJJ9 305 aa5.46□□□□□ -1.54
USF3-202ENST00000478658 NOP16Q9Y3C1 178 aaKnown RBP5.46□□□□□ -1.54
USF3-202ENST00000478658 SNX8Q9Y5X2 465 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms