RNA–Protein interactions for RNA: ENST00000477548.5

DFFB-209, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 2,923 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-209ENST00000477548 ERO1BQ86YB8 467 aa13.53□□□□□ -0.24
DFFB-209ENST00000477548 DDIASQ8IXT1 998 aa13.53□□□□□ -0.24
DFFB-209ENST00000477548 FSTL5Q8N475 847 aaPredicted RBP13.53□□□□□ -0.24
DFFB-209ENST00000477548 CCNYQ8ND76 341 aa13.53□□□□□ -0.24
DFFB-209ENST00000477548 PNPT1Q8TCS8 783 aaKnown RBP13.53□□□□□ -0.24
DFFB-209ENST00000477548 GPRASP2Q96D09 838 aa13.53□□□□□ -0.24
DFFB-209ENST00000477548 MAELQ96JY0 434 aaKnown RBP13.53□□□□□ -0.24
DFFB-209ENST00000477548 OMDQ99983 421 aa13.53□□□□□ -0.24
DFFB-209ENST00000477548 VTA1Q9NP79 307 aa13.53□□□□□ -0.24
DFFB-209ENST00000477548 AASDHPPTQ9NRN7 309 aa13.53□□□□□ -0.24
DFFB-209ENST00000477548 IARS2Q9NSE4 1012 aaKnown RBP13.53□□□□□ -0.24
DFFB-209ENST00000477548 ATP11BQ9Y2G3 1177 aa13.53□□□□□ -0.24
DFFB-209ENST00000477548 TRAF6Q9Y4K3 522 aa13.53□□□□□ -0.24
DFFB-209ENST00000477548 B4GAT1O43505 415 aa13.53□□□□□ -0.24
DFFB-209ENST00000477548 IL18RAPO95256 599 aa13.53□□□□□ -0.24
DFFB-209ENST00000477548 RASAL1O95294 804 aa13.53□□□□□ -0.24
DFFB-209ENST00000477548 NR3C2P08235 984 aa13.53□□□□□ -0.24
DFFB-209ENST00000477548 MBL2P11226 248 aaPredicted RBP13.53□□□□□ -0.24
DFFB-209ENST00000477548 TCEA1P23193 301 aaKnown RBP13.53□□□□□ -0.24
DFFB-209ENST00000477548 NEK2P51955 445 aa13.53□□□□□ -0.24
DFFB-209ENST00000477548 CAPSQ13938 189 aa13.53□□□□□ -0.24
DFFB-209ENST00000477548 GRM3Q14832 879 aa13.53□□□□□ -0.24
DFFB-209ENST00000477548 SF3B4Q15427 424 aaKnown RBP eCLIP13.53□□□□□ -0.24
DFFB-209ENST00000477548 ZPBP2Q6X784 338 aa13.53□□□□□ -0.24
DFFB-209ENST00000477548 SNX29P2Q8IUI4 249 aa13.53□□□□□ -0.24
DFFB-209ENST00000477548 CMTR2Q8IYT2 770 aaKnown RBP13.53□□□□□ -0.24
DFFB-209ENST00000477548 TMEM130Q8N3G9 435 aa13.53□□□□□ -0.24
DFFB-209ENST00000477548 ZNF641Q96N77 438 aaPredicted RBP13.53□□□□□ -0.24
DFFB-209ENST00000477548 CSPG4P5Q96PW8 444 aa13.53□□□□□ -0.24
DFFB-209ENST00000477548 CTRCQ99895 268 aa13.53□□□□□ -0.24
DFFB-209ENST00000477548 FTHL17Q9BXU8 183 aa13.53□□□□□ -0.24
DFFB-209ENST00000477548 MRPL4Q9BYD3 311 aaKnown RBP13.53□□□□□ -0.24
DFFB-209ENST00000477548 BCO2Q9BYV7 579 aa13.53□□□□□ -0.24
DFFB-209ENST00000477548 TMEM134Q9H6X4 195 aa13.53□□□□□ -0.24
DFFB-209ENST00000477548 FAM49BQ9NUQ9 324 aa13.53□□□□□ -0.24
DFFB-209ENST00000477548 TBC1D13Q9NVG8 400 aa13.53□□□□□ -0.24
DFFB-209ENST00000477548 BFARQ9NZS9 450 aa13.53□□□□□ -0.24
DFFB-209ENST00000477548 XPR1Q9UBH6 696 aa13.53□□□□□ -0.24
DFFB-209ENST00000477548 ANKRD6Q9Y2G4 727 aa13.53□□□□□ -0.24
DFFB-209ENST00000477548 PTPRFP10586 1907 aa13.53□□□□□ -0.24
DFFB-209ENST00000477548 NFKBIEO00221 500 aa13.53□□□□□ -0.24
DFFB-209ENST00000477548 HNRNPLP14866 589 aaKnown RBP eCLIP13.53□□□□□ -0.246e-10■■■■■ 42.4
DFFB-209ENST00000477548 NR4A1P22736 598 aa13.53□□□□□ -0.24
DFFB-209ENST00000477548 ATXN1P54253 815 aaKnown RBP13.53□□□□□ -0.24
DFFB-209ENST00000477548 TPTEP56180 551 aa13.53□□□□□ -0.24
DFFB-209ENST00000477548 DNASE1L3Q13609 305 aa13.53□□□□□ -0.24
DFFB-209ENST00000477548 NDUFA5Q16718 116 aa13.53□□□□□ -0.24
DFFB-209ENST00000477548 HSDL1Q3SXM5 330 aa13.53□□□□□ -0.24
DFFB-209ENST00000477548 NCBP2-AS2Q69YL0 99 aa13.53□□□□□ -0.24
DFFB-209ENST00000477548 FAM45BPQ6NSW5 357 aa13.53□□□□□ -0.24
DFFB-209ENST00000477548 DLK2Q6UY11 383 aa13.53□□□□□ -0.24
DFFB-209ENST00000477548 KCNMB4Q86W47 210 aa13.53□□□□□ -0.24
DFFB-209ENST00000477548 TMEM151AQ8N4L1 468 aa13.53□□□□□ -0.24
DFFB-209ENST00000477548 FAM45AQ8TCE6 357 aa13.53□□□□□ -0.24
DFFB-209ENST00000477548 SPPL2BQ8TCT7 592 aa13.53□□□□□ -0.24
DFFB-209ENST00000477548 STYXQ8WUJ0 223 aa13.53□□□□□ -0.24
DFFB-209ENST00000477548 MFSD3Q96ES6 412 aa13.53□□□□□ -0.24
DFFB-209ENST00000477548 OTUD5Q96G74 571 aa13.53□□□□□ -0.24
DFFB-209ENST00000477548 P2RY11Q96G91 374 aa13.53□□□□□ -0.24
DFFB-209ENST00000477548 SH3GL1Q99961 368 aa13.53□□□□□ -0.24
DFFB-209ENST00000477548 YTHDF1Q9BYJ9 559 aaKnown RBP13.53□□□□□ -0.24
DFFB-209ENST00000477548 GPN2Q9H9Y4 310 aaPredicted RBP13.53□□□□□ -0.24
DFFB-209ENST00000477548 MRGBPQ9NV56 204 aa13.53□□□□□ -0.24
DFFB-209ENST00000477548 VANGL2Q9ULK5 521 aa13.53□□□□□ -0.24
DFFB-209ENST00000477548 A8MU76 341 aa13.52□□□□□ -0.24
DFFB-209ENST00000477548 CILPO75339 1184 aa13.52□□□□□ -0.24
DFFB-209ENST00000477548 SEC14L2O76054 403 aa13.52□□□□□ -0.24
DFFB-209ENST00000477548 CCT8P50990 548 aa13.52□□□□□ -0.24
DFFB-209ENST00000477548 GHRHRQ02643 423 aa13.52□□□□□ -0.24
DFFB-209ENST00000477548 PPP1R3AQ16821 1122 aa13.52□□□□□ -0.24
DFFB-209ENST00000477548 CYBRD1Q53TN4 286 aa13.52□□□□□ -0.24
DFFB-209ENST00000477548 AGAP7PQ5VUJ5 663 aa13.52□□□□□ -0.24
DFFB-209ENST00000477548 BROXQ5VW32 411 aa13.52□□□□□ -0.24
DFFB-209ENST00000477548 ABHD15Q6UXT9 468 aa13.52□□□□□ -0.24
DFFB-209ENST00000477548 VSIG10LQ86VR7 867 aa13.52□□□□□ -0.24
DFFB-209ENST00000477548 SFRP1Q8N474 314 aa13.52□□□□□ -0.24
DFFB-209ENST00000477548 OR9I1Q8NGQ6 314 aa13.52□□□□□ -0.24
DFFB-209ENST00000477548 HDAC10Q969S8 669 aa13.52□□□□□ -0.24
DFFB-209ENST00000477548 TEPSINQ96N21 525 aa13.52□□□□□ -0.24
DFFB-209ENST00000477548 WDR12Q9GZL7 423 aaKnown RBP13.52□□□□□ -0.24
DFFB-209ENST00000477548 LHPPQ9H008 270 aa13.52□□□□□ -0.24
DFFB-209ENST00000477548 MAP3K20Q9NYL2 800 aaKnown RBP13.52□□□□□ -0.24
DFFB-209ENST00000477548 CPSF3Q9UKF6 684 aaKnown RBP13.52□□□□□ -0.24
DFFB-209ENST00000477548 SNX9Q9Y5X1 595 aa13.52□□□□□ -0.24
DFFB-209ENST00000477548 SCN4AP35499 1836 aa13.52□□□□□ -0.24
DFFB-209ENST00000477548 HACD1B0YJ81 288 aa13.52□□□□□ -0.25
DFFB-209ENST00000477548 DPYSL4O14531 572 aa13.52□□□□□ -0.25
DFFB-209ENST00000477548 SYNCRIPO60506 623 aaKnown RBP13.52□□□□□ -0.25
DFFB-209ENST00000477548 SNAP29O95721 258 aa13.52□□□□□ -0.25
DFFB-209ENST00000477548 ELK4P28324 431 aa13.52□□□□□ -0.25
DFFB-209ENST00000477548 PTPN9P43378 593 aa13.52□□□□□ -0.25
DFFB-209ENST00000477548 RPS9P46781 194 aaKnown RBP13.52□□□□□ -0.25
DFFB-209ENST00000477548 CSE1LP55060 971 aaKnown RBP13.52□□□□□ -0.25
DFFB-209ENST00000477548 DPYSL2Q16555 572 aa13.52□□□□□ -0.25
DFFB-209ENST00000477548 PID1Q7Z2X4 250 aa13.52□□□□□ -0.25
DFFB-209ENST00000477548 PIWIL3Q7Z3Z3 882 aaKnown RBP13.52□□□□□ -0.25
DFFB-209ENST00000477548 SCUBE3Q8IX30 993 aa13.52□□□□□ -0.25
DFFB-209ENST00000477548 SPATA6LQ8N4H0 392 aa13.52□□□□□ -0.25
DFFB-209ENST00000477548 MINDY2Q8NBR6 621 aa13.52□□□□□ -0.25
DFFB-209ENST00000477548 ZUFSPQ96AP4 578 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms