RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 TUBB4BP68371 445 aa16.32■□□□□ 0.2
VHL-203ENST00000477538 GUCY2DQ02846 1103 aa16.32■□□□□ 0.2
VHL-203ENST00000477538 CDK18Q07002 472 aa16.32■□□□□ 0.2
VHL-203ENST00000477538 TPSAB1Q15661 275 aa16.32■□□□□ 0.2
VHL-203ENST00000477538 RNASEH2BQ5TBB1 312 aaKnown RBP16.32■□□□□ 0.2
VHL-203ENST00000477538 ANKRD22Q5VYY1 191 aa16.32■□□□□ 0.2
VHL-203ENST00000477538 NAPEPLDQ6IQ20 393 aa16.32■□□□□ 0.2
VHL-203ENST00000477538 SPAG17Q6Q759 2223 aa16.32■□□□□ 0.2
VHL-203ENST00000477538 BBOF1Q8ND07 529 aa16.32■□□□□ 0.2
VHL-203ENST00000477538 TSTD1Q8NFU3 115 aa16.32■□□□□ 0.2
VHL-203ENST00000477538 PBXIP1Q96AQ6 731 aa16.32■□□□□ 0.2
VHL-203ENST00000477538 ARRDC3Q96B67 414 aa16.32■□□□□ 0.2
VHL-203ENST00000477538 ECHDC3Q96DC8 303 aa16.32■□□□□ 0.2
VHL-203ENST00000477538 PPP1R16AQ96I34 528 aa16.32■□□□□ 0.2
VHL-203ENST00000477538 TRIB3Q96RU7 358 aa16.32■□□□□ 0.2
VHL-203ENST00000477538 HINFPQ9BQA5 517 aa16.32■□□□□ 0.2
VHL-203ENST00000477538 SLC6A17Q9H1V8 727 aa16.32■□□□□ 0.2
VHL-203ENST00000477538 ZNF106Q9H2Y7 1883 aaKnown RBP16.32■□□□□ 0.2
VHL-203ENST00000477538 ARIH1Q9Y4X5 557 aaPredicted RBP16.32■□□□□ 0.2
VHL-203ENST00000477538 PCDHB9Q9Y5E1 797 aa16.32■□□□□ 0.2
VHL-203ENST00000477538 LOC285095A0A1B0GVY8 99 aa16.31■□□□□ 0.2
VHL-203ENST00000477538 A0A1W2PQ67 120 aa16.31■□□□□ 0.2
VHL-203ENST00000477538 TCRBV7S3A2A0A539 114 aa16.31■□□□□ 0.2
VHL-203ENST00000477538 ESYT3A0FGR9 886 aa16.31■□□□□ 0.2
VHL-203ENST00000477538 TSPAN11A1L157 253 aa16.31■□□□□ 0.2
VHL-203ENST00000477538 NDC80O14777 642 aa16.31■□□□□ 0.2
VHL-203ENST00000477538 MID1O15344 667 aa16.31■□□□□ 0.2
VHL-203ENST00000477538 FZD6O60353 706 aa16.31■□□□□ 0.2
VHL-203ENST00000477538 USP12O75317 370 aa16.31■□□□□ 0.2
VHL-203ENST00000477538 TMEM63AO94886 807 aa16.31■□□□□ 0.2
VHL-203ENST00000477538 SUN1O94901 812 aa16.31■□□□□ 0.2
VHL-203ENST00000477538 CPP00450 1065 aa16.31■□□□□ 0.2
VHL-203ENST00000477538 AGTP01019 485 aa16.31■□□□□ 0.2
VHL-203ENST00000477538 PRLP01236 227 aa16.31■□□□□ 0.2
VHL-203ENST00000477538 DNTTP04053 509 aa16.31■□□□□ 0.2
VHL-203ENST00000477538 PDHA1P08559 390 aa16.31■□□□□ 0.2
VHL-203ENST00000477538 NDUFV2P19404 249 aa16.31■□□□□ 0.2
VHL-203ENST00000477538 C5AR1P21730 350 aa16.31■□□□□ 0.2
VHL-203ENST00000477538 ITGB7P26010 798 aa16.31■□□□□ 0.2
VHL-203ENST00000477538 SLC8A1P32418 973 aa16.31■□□□□ 0.2
VHL-203ENST00000477538 ADRA1AP35348 466 aa16.31■□□□□ 0.2
VHL-203ENST00000477538 ITGA8P53708 1063 aa16.31■□□□□ 0.2
VHL-203ENST00000477538 CDK16Q00536 496 aa16.31■□□□□ 0.2
VHL-203ENST00000477538 OLIG2Q13516 323 aa16.31■□□□□ 0.2
VHL-203ENST00000477538 GALNT3Q14435 633 aa16.31■□□□□ 0.2
VHL-203ENST00000477538 BRAT1Q6PJG6 821 aa16.31■□□□□ 0.2
VHL-203ENST00000477538 KIAA1324Q6UXG2 1013 aaKnown RBP16.31■□□□□ 0.2
VHL-203ENST00000477538 HOOK3Q86VS8 718 aa16.31■□□□□ 0.2
VHL-203ENST00000477538 NAT8LQ8N9F0 302 aa16.31■□□□□ 0.2
VHL-203ENST00000477538 LPCAT1Q8NF37 534 aa16.31■□□□□ 0.2
VHL-203ENST00000477538 HMGB4Q8WW32 186 aa16.31■□□□□ 0.2
VHL-203ENST00000477538 PRCCQ92733 491 aaPredicted RBP16.31■□□□□ 0.2
VHL-203ENST00000477538 SIPA1Q96FS4 1042 aa16.31■□□□□ 0.2
VHL-203ENST00000477538 MRGPRX1Q96LB2 322 aa16.31■□□□□ 0.2
VHL-203ENST00000477538 HHIPQ96QV1 700 aa16.31■□□□□ 0.2
VHL-203ENST00000477538 APOL2Q9BQE5 337 aa16.31■□□□□ 0.2
VHL-203ENST00000477538 ADGRE3Q9BY15 652 aa16.31■□□□□ 0.2
VHL-203ENST00000477538 EPHX3Q9H6B9 360 aa16.31■□□□□ 0.2
VHL-203ENST00000477538 EPB41L5Q9HCM4 733 aa16.31■□□□□ 0.2
VHL-203ENST00000477538 DYRK4Q9NR20 520 aa16.31■□□□□ 0.2
VHL-203ENST00000477538 WHRNQ9P202 907 aa16.31■□□□□ 0.2
VHL-203ENST00000477538 DKK3Q9UBP4 350 aa16.31■□□□□ 0.2
VHL-203ENST00000477538 THADAQ6YHU6 1953 aa16.3■□□□□ 0.2
VHL-203ENST00000477538 C16orf96A6NNT2 1141 aa16.3■□□□□ 0.2
VHL-203ENST00000477538 BHMG1C9JSJ3 638 aaPredicted RBP16.3■□□□□ 0.2
VHL-203ENST00000477538 ALDH1A2O94788 518 aa16.3■□□□□ 0.2
VHL-203ENST00000477538 NDST3O95803 873 aa16.3■□□□□ 0.2
VHL-203ENST00000477538 EPOP01588 193 aa16.3■□□□□ 0.2
VHL-203ENST00000477538 C7P10643 843 aa16.3■□□□□ 0.2
VHL-203ENST00000477538 ITIH2P19823 946 aa16.3■□□□□ 0.2
VHL-203ENST00000477538 HLA-DPA1P20036 260 aa16.3■□□□□ 0.2
VHL-203ENST00000477538 CHRNA4P43681 627 aa16.3■□□□□ 0.2
VHL-203ENST00000477538 CXCL12P48061 93 aa16.3■□□□□ 0.2
VHL-203ENST00000477538 CCR3P51677 355 aa16.3■□□□□ 0.2
VHL-203ENST00000477538 EPHB1P54762 984 aa16.3■□□□□ 0.2
VHL-203ENST00000477538 DRG2P55039 364 aaKnown RBP16.3■□□□□ 0.2
VHL-203ENST00000477538 RPL26P61254 145 aaKnown RBP16.3■□□□□ 0.2
VHL-203ENST00000477538 ZBTB16Q05516 673 aa16.3■□□□□ 0.2
VHL-203ENST00000477538 CALCOCO2Q13137 446 aa16.3■□□□□ 0.2
VHL-203ENST00000477538 MORF4L2Q15014 288 aa16.3■□□□□ 0.2
VHL-203ENST00000477538 SLC1A5Q15758 541 aa16.3■□□□□ 0.2
VHL-203ENST00000477538 HIBCHQ6NVY1 386 aaPredicted RBP16.3■□□□□ 0.2
VHL-203ENST00000477538 RANBP10Q6VN20 620 aa16.3■□□□□ 0.2
VHL-203ENST00000477538 PPP1R21Q6ZMI0 780 aa16.3■□□□□ 0.2
VHL-203ENST00000477538 PARS2Q7L3T8 475 aaKnown RBP16.3■□□□□ 0.2
VHL-203ENST00000477538 BMP8AQ7Z5Y6 402 aa16.3■□□□□ 0.2
VHL-203ENST00000477538 LINC00523Q86TU6 105 aa16.3■□□□□ 0.2
VHL-203ENST00000477538 ZSWIM9Q86XI8 627 aa16.3■□□□□ 0.2
VHL-203ENST00000477538 PGBD3Q8N328 593 aa16.3■□□□□ 0.2
VHL-203ENST00000477538 FBXL6Q8N531 539 aa16.3■□□□□ 0.2
VHL-203ENST00000477538 SLC25A41Q8N5S1 370 aa16.3■□□□□ 0.2
VHL-203ENST00000477538 HCAR2Q8TDS4 363 aa16.3■□□□□ 0.2
VHL-203ENST00000477538 SEC14L1Q92503 715 aa16.3■□□□□ 0.2
VHL-203ENST00000477538 RMDN1Q96DB5 314 aa16.3■□□□□ 0.2
VHL-203ENST00000477538 COL25A1Q9BXS0 654 aaPredicted RBP16.3■□□□□ 0.2
VHL-203ENST00000477538 PABPC3Q9H361 631 aaKnown RBP16.3■□□□□ 0.2
VHL-203ENST00000477538 FAM114A2Q9NRY5 505 aa16.3■□□□□ 0.2
VHL-203ENST00000477538 SPATA6Q9NWH7 488 aaPredicted RBP16.3■□□□□ 0.2
VHL-203ENST00000477538 GRHL1Q9NZI5 618 aa16.3■□□□□ 0.2
VHL-203ENST00000477538 BCCIPQ9P287 314 aaKnown RBP eCLIP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms