RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 ARHGAP44Q17R89 818 aa7.41□□□□□ -1.22
BRCA1-214ENST00000477152 ARL13BQ3SXY8 428 aa7.41□□□□□ -1.22
BRCA1-214ENST00000477152 KCNT1Q5JUK3 1230 aa7.41□□□□□ -1.22
BRCA1-214ENST00000477152 KIAA1161Q6NSJ0 714 aa7.41□□□□□ -1.22
BRCA1-214ENST00000477152 SLC26A9Q7LBE3 791 aa7.41□□□□□ -1.22
BRCA1-214ENST00000477152 ZNF397Q8NF99 534 aaPredicted RBP7.41□□□□□ -1.22
BRCA1-214ENST00000477152 WDR48Q8TAF3 677 aa7.41□□□□□ -1.22
BRCA1-214ENST00000477152 BTN2A2Q8WVV5 523 aa7.41□□□□□ -1.22
BRCA1-214ENST00000477152 RFFLQ8WZ73 363 aa7.41□□□□□ -1.22
BRCA1-214ENST00000477152 FAM131CQ96AQ9 280 aa7.41□□□□□ -1.22
BRCA1-214ENST00000477152 ARHGEF26Q96DR7 871 aa7.41□□□□□ -1.22
BRCA1-214ENST00000477152 FEM1CQ96JP0 617 aa7.41□□□□□ -1.22
BRCA1-214ENST00000477152 C1orf74Q96LT6 269 aa7.41□□□□□ -1.22
BRCA1-214ENST00000477152 KREMEN1Q96MU8 473 aa7.41□□□□□ -1.22
BRCA1-214ENST00000477152 ZNF578Q96N58 590 aaPredicted RBP7.41□□□□□ -1.22
BRCA1-214ENST00000477152 SIK2Q9H0K1 926 aa7.41□□□□□ -1.22
BRCA1-214ENST00000477152 RWDD2AQ9UIY3 292 aa7.41□□□□□ -1.22
BRCA1-214ENST00000477152 HPCAL4Q9UM19 191 aa7.41□□□□□ -1.22
BRCA1-214ENST00000477152 HS3ST2Q9Y278 367 aa7.41□□□□□ -1.22
BRCA1-214ENST00000477152 TBC1D30Q9Y2I9 924 aa7.41□□□□□ -1.22
BRCA1-214ENST00000477152 HS3ST3A1Q9Y663 406 aa7.41□□□□□ -1.22
BRCA1-214ENST00000477152 MYLKQ15746 1914 aa7.41□□□□□ -1.22
BRCA1-214ENST00000477152 GOLGA4Q13439 2230 aaKnown RBP7.41□□□□□ -1.22
BRCA1-214ENST00000477152 URB1O60287 2271 aaKnown RBP7.41□□□□□ -1.22
BRCA1-214ENST00000477152 B2RBV5 119 aa7.4□□□□□ -1.22
BRCA1-214ENST00000477152 EIF4EBP3O60516 100 aaPredicted RBP7.4□□□□□ -1.22
BRCA1-214ENST00000477152 RTN2O75298 545 aa7.4□□□□□ -1.22
BRCA1-214ENST00000477152 TPM2P07951 284 aa7.4□□□□□ -1.22
BRCA1-214ENST00000477152 DESP17661 470 aa7.4□□□□□ -1.22
BRCA1-214ENST00000477152 DRD3P35462 400 aa7.4□□□□□ -1.22
BRCA1-214ENST00000477152 RPS21P63220 83 aaKnown RBP7.4□□□□□ -1.22
BRCA1-214ENST00000477152 DEUP1Q05D60 604 aa7.4□□□□□ -1.22
BRCA1-214ENST00000477152 KCNMA1Q12791 1236 aa7.4□□□□□ -1.22
BRCA1-214ENST00000477152 CNTN1Q12860 1018 aa7.4□□□□□ -1.22
BRCA1-214ENST00000477152 DNAJC3Q13217 504 aa7.4□□□□□ -1.22
BRCA1-214ENST00000477152 SGCGQ13326 291 aa7.4□□□□□ -1.22
BRCA1-214ENST00000477152 PTK2BQ14289 1009 aa7.4□□□□□ -1.22
BRCA1-214ENST00000477152 KCNJ12Q14500 433 aa7.4□□□□□ -1.22
BRCA1-214ENST00000477152 C5orf22Q49AR2 442 aa7.4□□□□□ -1.22
BRCA1-214ENST00000477152 PRAMEF14Q5SWL7 426 aa7.4□□□□□ -1.22
BRCA1-214ENST00000477152 SFMBT2Q5VUG0 894 aa7.4□□□□□ -1.22
BRCA1-214ENST00000477152 TRIM65Q6PJ69 517 aa7.4□□□□□ -1.22
BRCA1-214ENST00000477152 ERN2Q76MJ5 926 aaKnown RBP7.4□□□□□ -1.22
BRCA1-214ENST00000477152 GPR155Q7Z3F1 870 aa7.4□□□□□ -1.22
BRCA1-214ENST00000477152 HORMAD1Q86X24 394 aa7.4□□□□□ -1.22
BRCA1-214ENST00000477152 DCAF4L2Q8NA75 395 aa7.4□□□□□ -1.22
BRCA1-214ENST00000477152 ZNF248Q8NDW4 579 aa7.4□□□□□ -1.22
BRCA1-214ENST00000477152 OR4C6Q8NH72 309 aa7.4□□□□□ -1.22
BRCA1-214ENST00000477152 FRS2Q8WU20 508 aa7.4□□□□□ -1.22
BRCA1-214ENST00000477152 RAB7BQ96AH8 199 aa7.4□□□□□ -1.22
BRCA1-214ENST00000477152 ZSWIM1Q9BR11 485 aa7.4□□□□□ -1.22
BRCA1-214ENST00000477152 C1QTNF7Q9BXJ2 289 aa7.4□□□□□ -1.22
BRCA1-214ENST00000477152 HDAC8Q9BY41 377 aa7.4□□□□□ -1.22
BRCA1-214ENST00000477152 WNT10AQ9GZT5 417 aa7.4□□□□□ -1.22
BRCA1-214ENST00000477152 NLGN3Q9NZ94 848 aa7.4□□□□□ -1.22
BRCA1-214ENST00000477152 IL36AQ9UHA7 158 aa7.4□□□□□ -1.22
BRCA1-214ENST00000477152 PCDHB10Q9UN67 800 aa7.4□□□□□ -1.22
BRCA1-214ENST00000477152 SLCO1B1Q9Y6L6 691 aa7.4□□□□□ -1.22
BRCA1-214ENST00000477152 ACACAQ13085 2346 aa7.4□□□□□ -1.22
BRCA1-214ENST00000477152 A0A1W2PQU0 124 aa7.4□□□□□ -1.23
BRCA1-214ENST00000477152 TOR1BO14657 336 aa7.4□□□□□ -1.23
BRCA1-214ENST00000477152 SLC31A1O15431 190 aa7.4□□□□□ -1.23
BRCA1-214ENST00000477152 MT-CO3P00414 261 aa7.4□□□□□ -1.23
BRCA1-214ENST00000477152 OR1E1P30953 314 aa7.4□□□□□ -1.23
BRCA1-214ENST00000477152 RABIFP47224 123 aa7.4□□□□□ -1.23
BRCA1-214ENST00000477152 SULT1E1P49888 294 aa7.4□□□□□ -1.23
BRCA1-214ENST00000477152 NEK3P51956 506 aa7.4□□□□□ -1.23
BRCA1-214ENST00000477152 STX17P56962 302 aa7.4□□□□□ -1.23
BRCA1-214ENST00000477152 PPP2CBP62714 309 aa7.4□□□□□ -1.23
BRCA1-214ENST00000477152 PPP2CAP67775 309 aa7.4□□□□□ -1.23
BRCA1-214ENST00000477152 RAD51Q06609 339 aa7.4□□□□□ -1.23
BRCA1-214ENST00000477152 BNIP3Q12983 259 aa7.4□□□□□ -1.23
BRCA1-214ENST00000477152 EIF4EBP2Q13542 120 aaPredicted RBP7.4□□□□□ -1.23
BRCA1-214ENST00000477152 SHBQ15464 509 aa7.4□□□□□ -1.23
BRCA1-214ENST00000477152 AGBL4Q5VU57 503 aa7.4□□□□□ -1.23
BRCA1-214ENST00000477152 CXorf57Q6NSI4 855 aaKnown RBP7.4□□□□□ -1.23
BRCA1-214ENST00000477152 PCDH20Q8N6Y1 951 aaKnown RBP7.4□□□□□ -1.23
BRCA1-214ENST00000477152 MLKLQ8NB16 471 aa7.4□□□□□ -1.23
BRCA1-214ENST00000477152 SHC3Q92529 594 aa7.4□□□□□ -1.23
BRCA1-214ENST00000477152 C18orf8Q96DM3 657 aa7.4□□□□□ -1.23
BRCA1-214ENST00000477152 PGAP3Q96FM1 320 aaPredicted RBP7.4□□□□□ -1.23
BRCA1-214ENST00000477152 LGMNQ99538 433 aa7.4□□□□□ -1.23
BRCA1-214ENST00000477152 CALN1Q9BXU9 219 aa7.4□□□□□ -1.23
BRCA1-214ENST00000477152 TKTL2Q9H0I9 626 aa7.4□□□□□ -1.23
BRCA1-214ENST00000477152 EBF2Q9HAK2 575 aa7.4□□□□□ -1.23
BRCA1-214ENST00000477152 DONSONQ9NYP3 566 aa7.4□□□□□ -1.23
BRCA1-214ENST00000477152 ACTR10Q9NZ32 417 aa7.4□□□□□ -1.23
BRCA1-214ENST00000477152 ARHGAP20Q9P2F6 1191 aa7.4□□□□□ -1.23
BRCA1-214ENST00000477152 XPO7Q9UIA9 1087 aaKnown RBP7.4□□□□□ -1.23
BRCA1-214ENST00000477152 ACTL7BQ9Y614 415 aa7.4□□□□□ -1.23
BRCA1-214ENST00000477152 HS3ST4Q9Y661 456 aa7.4□□□□□ -1.23
BRCA1-214ENST00000477152 CSNK1G3Q9Y6M4 447 aa7.4□□□□□ -1.23
BRCA1-214ENST00000477152 ILVBLA1L0T0 632 aa7.39□□□□□ -1.23
BRCA1-214ENST00000477152 MEGF11A6BM72 1044 aa7.39□□□□□ -1.23
BRCA1-214ENST00000477152 F8W735 103 aaPredicted RBP7.39□□□□□ -1.23
BRCA1-214ENST00000477152 BIN1O00499 593 aa7.39□□□□□ -1.23
BRCA1-214ENST00000477152 NEMP1O14524 444 aa7.39□□□□□ -1.23
BRCA1-214ENST00000477152 FPGTO14772 594 aa7.39□□□□□ -1.23
BRCA1-214ENST00000477152 WIPF1O43516 503 aa7.39□□□□□ -1.23
BRCA1-214ENST00000477152 SIGLEC6O43699 453 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms