RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 HAUS2Q9NVX0 235 aa14.57□□□□□ -0.08
COL4A6-206ENST00000477085 LMCD1Q9NZU5 365 aa14.57□□□□□ -0.08
COL4A6-206ENST00000477085 EVLQ9UI08 416 aaPredicted RBP14.57□□□□□ -0.08
COL4A6-206ENST00000477085 ACTL7BQ9Y614 415 aa14.57□□□□□ -0.08
COL4A6-206ENST00000477085 MYO9BQ13459 2157 aa14.57□□□□□ -0.08
COL4A6-206ENST00000477085 PRRC2BQ5JSZ5 2229 aaKnown RBP14.56□□□□□ -0.08
COL4A6-206ENST00000477085 VAPBO95292 243 aa14.56□□□□□ -0.08
COL4A6-206ENST00000477085 FGF1P05230 155 aa14.56□□□□□ -0.08
COL4A6-206ENST00000477085 MDH1P40925 334 aaKnown RBP14.56□□□□□ -0.08
COL4A6-206ENST00000477085 SLC6A11P48066 632 aa14.56□□□□□ -0.08
COL4A6-206ENST00000477085 RGS19P49795 217 aa14.56□□□□□ -0.08
COL4A6-206ENST00000477085 NR1H3Q13133 447 aa14.56□□□□□ -0.08
COL4A6-206ENST00000477085 TERF2Q15554 542 aa14.56□□□□□ -0.08
COL4A6-206ENST00000477085 LRIT3Q3SXY7 679 aa14.56□□□□□ -0.08
COL4A6-206ENST00000477085 TSTD2Q5T7W7 516 aa14.56□□□□□ -0.08
COL4A6-206ENST00000477085 MBLAC2Q68D91 279 aa14.56□□□□□ -0.08
COL4A6-206ENST00000477085 NAIF1Q69YI7 327 aaPredicted RBP14.56□□□□□ -0.08
COL4A6-206ENST00000477085 KCNMB4Q86W47 210 aa14.56□□□□□ -0.08
COL4A6-206ENST00000477085 RASSF3Q86WH2 238 aa14.56□□□□□ -0.08
COL4A6-206ENST00000477085 CAMK1DQ8IU85 385 aa14.56□□□□□ -0.08
COL4A6-206ENST00000477085 ETFBKMTQ8IXQ9 262 aa14.56□□□□□ -0.08
COL4A6-206ENST00000477085 MSLNLQ96KJ4 702 aa14.56□□□□□ -0.08
COL4A6-206ENST00000477085 MRGPRX3Q96LB0 322 aa14.56□□□□□ -0.08
COL4A6-206ENST00000477085 SELENOSQ9BQE4 189 aa14.56□□□□□ -0.08
COL4A6-206ENST00000477085 MCMBPQ9BTE3 642 aa14.56□□□□□ -0.08
COL4A6-206ENST00000477085 RPP25Q9BUL9 199 aaKnown RBP14.56□□□□□ -0.08
COL4A6-206ENST00000477085 SLC2A11Q9BYW1 496 aa14.56□□□□□ -0.08
COL4A6-206ENST00000477085 CLDND1Q9NY35 253 aa14.56□□□□□ -0.08
COL4A6-206ENST00000477085 OBP2AQ9NY56 170 aa14.56□□□□□ -0.08
COL4A6-206ENST00000477085 ARIH1Q9Y4X5 557 aaPredicted RBP14.56□□□□□ -0.08
COL4A6-206ENST00000477085 ARL5AQ9Y689 179 aa14.56□□□□□ -0.08
COL4A6-206ENST00000477085 A0A0U1RQS6 177 aa14.55□□□□□ -0.08
COL4A6-206ENST00000477085 CXorf51AA0A1B0GTR3 108 aa14.55□□□□□ -0.08
COL4A6-206ENST00000477085 TMEM120BA0PK00 339 aa14.55□□□□□ -0.08
COL4A6-206ENST00000477085 HEATR9A2RTY3 570 aa14.55□□□□□ -0.08
COL4A6-206ENST00000477085 GOLGA8RI6L899 631 aa14.55□□□□□ -0.08
COL4A6-206ENST00000477085 CCL22O00626 93 aa14.55□□□□□ -0.08
COL4A6-206ENST00000477085 TRAFD1O14545 582 aaPredicted RBP14.55□□□□□ -0.08
COL4A6-206ENST00000477085 BUD23O43709 281 aaKnown RBP14.55□□□□□ -0.08
COL4A6-206ENST00000477085 SPAG7O75391 227 aa14.55□□□□□ -0.08
COL4A6-206ENST00000477085 RFPL1O75677 317 aa14.55□□□□□ -0.08
COL4A6-206ENST00000477085 ALADP13716 330 aa14.55□□□□□ -0.08
COL4A6-206ENST00000477085 CHN1P15882 459 aa14.55□□□□□ -0.08
COL4A6-206ENST00000477085 KRT4P19013 534 aa14.55□□□□□ -0.08
COL4A6-206ENST00000477085 CSNK1DP48730 415 aa14.55□□□□□ -0.08
COL4A6-206ENST00000477085 ARSDP51689 593 aa14.55□□□□□ -0.08
COL4A6-206ENST00000477085 ECT2LQ008S8 904 aa14.55□□□□□ -0.08
COL4A6-206ENST00000477085 GABPB1Q06547 395 aaPredicted RBP14.55□□□□□ -0.08
COL4A6-206ENST00000477085 COL19A1Q14993 1142 aa14.55□□□□□ -0.08
COL4A6-206ENST00000477085 PARM1Q6UWI2 310 aa14.55□□□□□ -0.08
COL4A6-206ENST00000477085 TAOK1Q7L7X3 1001 aa14.55□□□□□ -0.08
COL4A6-206ENST00000477085 PNPLA1Q8N8W4 532 aa14.55□□□□□ -0.08
COL4A6-206ENST00000477085 MDGA1Q8NFP4 955 aa14.55□□□□□ -0.08
COL4A6-206ENST00000477085 BLOC1S5Q8TDH9 187 aa14.55□□□□□ -0.08
COL4A6-206ENST00000477085 CYB5D2Q8WUJ1 264 aa14.55□□□□□ -0.08
COL4A6-206ENST00000477085 MYO19Q96H55 970 aa14.55□□□□□ -0.08
COL4A6-206ENST00000477085 POMKQ9H5K3 350 aa14.55□□□□□ -0.08
COL4A6-206ENST00000477085 ECT2Q9H8V3 914 aa14.55□□□□□ -0.08
COL4A6-206ENST00000477085 ZFP14Q9HCL3 533 aa14.55□□□□□ -0.08
COL4A6-206ENST00000477085 IARS2Q9NSE4 1012 aaKnown RBP14.55□□□□□ -0.08
COL4A6-206ENST00000477085 ZFATQ9P243 1243 aa14.55□□□□□ -0.08
COL4A6-206ENST00000477085 GGT7Q9UJ14 662 aa14.55□□□□□ -0.08
COL4A6-206ENST00000477085 IKBKGQ9Y6K9 419 aa14.55□□□□□ -0.08
COL4A6-206ENST00000477085 IQANK1A0A1B0GTG1 560 aa14.55□□□□□ -0.08
COL4A6-206ENST00000477085 ANKRD66B4E2M5 251 aa14.55□□□□□ -0.08
COL4A6-206ENST00000477085 TRIM49D1C9J1S8 452 aa14.55□□□□□ -0.08
COL4A6-206ENST00000477085 TYROBPO43914 113 aa14.55□□□□□ -0.08
COL4A6-206ENST00000477085 SHOX2O60902 331 aaPredicted RBP14.55□□□□□ -0.08
COL4A6-206ENST00000477085 TULP3O75386 442 aa14.55□□□□□ -0.08
COL4A6-206ENST00000477085 PIGNO95427 931 aa14.55□□□□□ -0.08
COL4A6-206ENST00000477085 SNRPAP09012 282 aaKnown RBP14.55□□□□□ -0.08
COL4A6-206ENST00000477085 LAMP2P13473 410 aa14.55□□□□□ -0.08
COL4A6-206ENST00000477085 GABRB3P28472 473 aa14.55□□□□□ -0.08
COL4A6-206ENST00000477085 FCHO2Q0JRZ9 810 aa14.55□□□□□ -0.08
COL4A6-206ENST00000477085 GRM2Q14416 872 aa14.55□□□□□ -0.08
COL4A6-206ENST00000477085 DMC1Q14565 340 aa14.55□□□□□ -0.08
COL4A6-206ENST00000477085 QPCTQ16769 361 aa14.55□□□□□ -0.08
COL4A6-206ENST00000477085 MROH9Q5TGP6 573 aa14.55□□□□□ -0.08
COL4A6-206ENST00000477085 EP400NLQ6ZTU2 488 aa14.55□□□□□ -0.08
COL4A6-206ENST00000477085 SFTPA1Q8IWL2 248 aa14.55□□□□□ -0.08
COL4A6-206ENST00000477085 ARFGAP2Q8N6H7 521 aa14.55□□□□□ -0.08
COL4A6-206ENST00000477085 LPCAT1Q8NF37 534 aa14.55□□□□□ -0.08
COL4A6-206ENST00000477085 BRSK1Q8TDC3 778 aa14.55□□□□□ -0.08
COL4A6-206ENST00000477085 ATXN2LQ8WWM7 1075 aaKnown RBP14.55□□□□□ -0.08
COL4A6-206ENST00000477085 CDKL2Q92772 493 aa14.55□□□□□ -0.08
COL4A6-206ENST00000477085 FGF14Q92915 247 aa14.55□□□□□ -0.08
COL4A6-206ENST00000477085 CHFRQ96EP1 664 aa14.55□□□□□ -0.08
COL4A6-206ENST00000477085 CAPS2Q9BXY5 557 aa14.55□□□□□ -0.08
COL4A6-206ENST00000477085 MIA3Q5JRA6 1907 aa14.54□□□□□ -0.08
COL4A6-206ENST00000477085 PAPSS2O95340 614 aaPredicted RBP14.54□□□□□ -0.08
COL4A6-206ENST00000477085 ADH1CP00326 375 aa14.54□□□□□ -0.08
COL4A6-206ENST00000477085 SP100P23497 879 aaPredicted RBP14.54□□□□□ -0.08
COL4A6-206ENST00000477085 ABCG1P45844 678 aa14.54□□□□□ -0.08
COL4A6-206ENST00000477085 DGKGP49619 791 aa14.54□□□□□ -0.08
COL4A6-206ENST00000477085 AP1S1P61966 158 aa14.54□□□□□ -0.08
COL4A6-206ENST00000477085 NAB1Q13506 487 aa14.54□□□□□ -0.08
COL4A6-206ENST00000477085 DLG2Q15700 870 aa14.54□□□□□ -0.08
COL4A6-206ENST00000477085 PTPRNQ16849 979 aa14.54□□□□□ -0.08
COL4A6-206ENST00000477085 RALGPS1Q5JS13 557 aa14.54□□□□□ -0.08
COL4A6-206ENST00000477085 PDPK2PQ6A1A2 396 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms