RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 TDRD12Q587J7 1177 aaKnown RBP10.9□□□□□ -0.66
SEC13-214ENST00000476597 HES3Q5TGS1 186 aa10.9□□□□□ -0.66
SEC13-214ENST00000476597 BRAT1Q6PJG6 821 aa10.9□□□□□ -0.66
SEC13-214ENST00000476597 KDM7AQ6ZMT4 941 aa10.9□□□□□ -0.66
SEC13-214ENST00000476597 ARHGAP36Q6ZRI8 547 aa10.9□□□□□ -0.66
SEC13-214ENST00000476597 POLNQ7Z5Q5 900 aa10.9□□□□□ -0.66
SEC13-214ENST00000476597 VPS36Q86VN1 386 aa10.9□□□□□ -0.66
SEC13-214ENST00000476597 CAMK1DQ8IU85 385 aa10.9□□□□□ -0.66
SEC13-214ENST00000476597 NPWQ8N729 165 aa10.9□□□□□ -0.66
SEC13-214ENST00000476597 TP53I13Q8NBR0 393 aaPredicted RBP10.9□□□□□ -0.66
SEC13-214ENST00000476597 TSEN2Q8NCE0 465 aaKnown RBP10.9□□□□□ -0.66
SEC13-214ENST00000476597 ZNF548Q8NEK5 533 aaPredicted RBP10.9□□□□□ -0.66
SEC13-214ENST00000476597 CPLX3Q8WVH0 158 aa10.9□□□□□ -0.66
SEC13-214ENST00000476597 APOLD1Q96LR9 279 aa10.9□□□□□ -0.66
SEC13-214ENST00000476597 TUBGCP5Q96RT8 1024 aa10.9□□□□□ -0.66
SEC13-214ENST00000476597 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.9□□□□□ -0.66
SEC13-214ENST00000476597 DUSP23Q9BVJ7 150 aa10.9□□□□□ -0.66
SEC13-214ENST00000476597 ZWILCHQ9H900 591 aa10.9□□□□□ -0.66
SEC13-214ENST00000476597 PCDH12Q9NPG4 1184 aa10.9□□□□□ -0.66
SEC13-214ENST00000476597 RALYQ9UKM9 306 aaKnown RBP10.9□□□□□ -0.66
SEC13-214ENST00000476597 RAXQ9Y2V3 346 aa10.9□□□□□ -0.66
SEC13-214ENST00000476597 LUC7L2Q9Y383 392 aaKnown RBP10.9□□□□□ -0.66
SEC13-214ENST00000476597 GPSM3Q9Y4H4 160 aa10.9□□□□□ -0.66
SEC13-214ENST00000476597 IGSF10Q6WRI0 2623 aa10.9□□□□□ -0.66
SEC13-214ENST00000476597 COL5A1P20908 1838 aaPredicted RBP10.9□□□□□ -0.66
SEC13-214ENST00000476597 PLXNB3Q9ULL4 1909 aa10.9□□□□□ -0.67
SEC13-214ENST00000476597 SMG1Q96Q15 3661 aaKnown RBP10.89□□□□□ -0.67
SEC13-214ENST00000476597 CHD5Q8TDI0 1954 aa10.89□□□□□ -0.67
SEC13-214ENST00000476597 A0A087X0T9 212 aa10.89□□□□□ -0.67
SEC13-214ENST00000476597 LY6G6EA0A0G2JKS1 128 aa10.89□□□□□ -0.67
SEC13-214ENST00000476597 CFAP69A5D8W1 941 aa10.89□□□□□ -0.67
SEC13-214ENST00000476597 GOLGA6L19H0YKK7 550 aa10.89□□□□□ -0.67
SEC13-214ENST00000476597 H3BM21 787 aa10.89□□□□□ -0.67
SEC13-214ENST00000476597 DFFAO00273 331 aa10.89□□□□□ -0.67
SEC13-214ENST00000476597 AQP9O43315 295 aa10.89□□□□□ -0.67
SEC13-214ENST00000476597 NEBLO76041 1014 aa10.89□□□□□ -0.67
SEC13-214ENST00000476597 CYP1A2P05177 515 aa10.89□□□□□ -0.67
SEC13-214ENST00000476597 FAM228BP0C875 321 aa10.89□□□□□ -0.67
SEC13-214ENST00000476597 RARAP10276 462 aa10.89□□□□□ -0.67
SEC13-214ENST00000476597 JUNDP17535 347 aa10.89□□□□□ -0.67
SEC13-214ENST00000476597 AMPD1P23109 780 aa10.89□□□□□ -0.67
SEC13-214ENST00000476597 IGFALSP35858 605 aa10.89□□□□□ -0.67
SEC13-214ENST00000476597 DUSP3P51452 185 aaPredicted RBP10.89□□□□□ -0.67
SEC13-214ENST00000476597 THOP1P52888 689 aa10.89□□□□□ -0.67
SEC13-214ENST00000476597 INSM1Q01101 510 aaPredicted RBP10.89□□□□□ -0.67
SEC13-214ENST00000476597 LRRC14Q15048 493 aa10.89□□□□□ -0.67
SEC13-214ENST00000476597 AGERQ15109 404 aa10.89□□□□□ -0.67
SEC13-214ENST00000476597 ZSWIM9Q86XI8 627 aa10.89□□□□□ -0.67
SEC13-214ENST00000476597 TP53INP2Q8IXH6 220 aa10.89□□□□□ -0.67
SEC13-214ENST00000476597 DCBLD1Q8N8Z6 715 aa10.89□□□□□ -0.67
SEC13-214ENST00000476597 BTN2A2Q8WVV5 523 aa10.89□□□□□ -0.67
SEC13-214ENST00000476597 NSMCE3Q96MG7 304 aa10.89□□□□□ -0.67
SEC13-214ENST00000476597 PSKH2Q96QS6 385 aa10.89□□□□□ -0.67
SEC13-214ENST00000476597 WRAP53Q9BUR4 548 aaKnown RBP10.89□□□□□ -0.67
SEC13-214ENST00000476597 C1QTNF7Q9BXJ2 289 aa10.89□□□□□ -0.67
SEC13-214ENST00000476597 THAP2Q9H0W7 228 aa10.89□□□□□ -0.67
SEC13-214ENST00000476597 ATP13A3Q9H7F0 1226 aa10.89□□□□□ -0.67
SEC13-214ENST00000476597 USP29Q9HBJ7 922 aa10.89□□□□□ -0.67
SEC13-214ENST00000476597 ETNK2Q9NVF9 386 aa10.89□□□□□ -0.67
SEC13-214ENST00000476597 PNMA8BQ9ULN7 279 aaPredicted RBP10.89□□□□□ -0.67
SEC13-214ENST00000476597 CLCA2Q9UQC9 943 aa10.89□□□□□ -0.67
SEC13-214ENST00000476597 U3KQA8 63 aa10.89□□□□□ -0.67
SEC13-214ENST00000476597 NYNRINQ9P2P1 1898 aaKnown RBP10.89□□□□□ -0.67
SEC13-214ENST00000476597 DOCK9Q9BZ29 2069 aa10.88□□□□□ -0.67
SEC13-214ENST00000476597 TMEM110-MUSTN1A8MSY1 372 aa10.88□□□□□ -0.67
SEC13-214ENST00000476597 H3BRJ5 948 aa10.88□□□□□ -0.67
SEC13-214ENST00000476597 TRAFD1O14545 582 aaPredicted RBP10.88□□□□□ -0.67
SEC13-214ENST00000476597 TPP1O14773 563 aa10.88□□□□□ -0.67
SEC13-214ENST00000476597 MUSKO15146 869 aa10.88□□□□□ -0.67
SEC13-214ENST00000476597 PEX11BO96011 259 aa10.88□□□□□ -0.67
SEC13-214ENST00000476597 MT-CO3P00414 261 aa10.88□□□□□ -0.67
SEC13-214ENST00000476597 GYPCP04921 128 aa10.88□□□□□ -0.67
SEC13-214ENST00000476597 GP1BAP07359 652 aa10.88□□□□□ -0.67
SEC13-214ENST00000476597 MYF5P13349 255 aa10.88□□□□□ -0.67
SEC13-214ENST00000476597 PTMSP20962 102 aa10.88□□□□□ -0.67
SEC13-214ENST00000476597 IL4RP24394 825 aa10.88□□□□□ -0.67
SEC13-214ENST00000476597 SERPINA4P29622 427 aa10.88□□□□□ -0.67
SEC13-214ENST00000476597 EIF4A3P38919 411 aaKnown RBP10.88□□□□□ -0.67
SEC13-214ENST00000476597 ARL4AP40617 200 aa10.88□□□□□ -0.67
SEC13-214ENST00000476597 LIG3P49916 1009 aa10.88□□□□□ -0.67
SEC13-214ENST00000476597 PEX5P50542 639 aa10.88□□□□□ -0.67
SEC13-214ENST00000476597 SCNN1BP51168 640 aa10.88□□□□□ -0.67
SEC13-214ENST00000476597 RENBPP51606 427 aa10.88□□□□□ -0.67
SEC13-214ENST00000476597 POLR2LP62875 67 aaKnown RBP10.88□□□□□ -0.67
SEC13-214ENST00000476597 BCL2L1Q07817 233 aa10.88□□□□□ -0.67
SEC13-214ENST00000476597 SLC10A7Q0GE19 358 aa10.88□□□□□ -0.67
SEC13-214ENST00000476597 LBRQ14739 615 aaKnown RBP10.88□□□□□ -0.67
SEC13-214ENST00000476597 RTP5Q14D33 572 aa10.88□□□□□ -0.67
SEC13-214ENST00000476597 SMTNL2Q2TAL5 461 aa10.88□□□□□ -0.67
SEC13-214ENST00000476597 WSCD2Q2TBF2 565 aa10.88□□□□□ -0.67
SEC13-214ENST00000476597 TXNRD3NBQ6F5E7 133 aa10.88□□□□□ -0.67
SEC13-214ENST00000476597 ERAP2Q6P179 960 aa10.88□□□□□ -0.67
SEC13-214ENST00000476597 ALKBH5Q6P6C2 394 aaKnown RBP10.88□□□□□ -0.67
SEC13-214ENST00000476597 NIPA2Q8N8Q9 360 aa10.88□□□□□ -0.67
SEC13-214ENST00000476597 LMX1AQ8TE12 382 aa10.88□□□□□ -0.67
SEC13-214ENST00000476597 TEKT4Q8WW24 435 aa10.88□□□□□ -0.67
SEC13-214ENST00000476597 ECHDC3Q96DC8 303 aa10.88□□□□□ -0.67
SEC13-214ENST00000476597 BTBD6Q96KE9 485 aa10.88□□□□□ -0.67
SEC13-214ENST00000476597 TBATAQ96M53 351 aa10.88□□□□□ -0.67
SEC13-214ENST00000476597 ZNF599Q96NL3 588 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms