RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 CYLC1P35663 651 aaPredicted RBP10.31□□□□□ -0.76
CCM2-208ENST00000476594 HNF1BP35680 557 aa10.31□□□□□ -0.76
CCM2-208ENST00000476594 SLC1A1P43005 524 aa10.31□□□□□ -0.76
CCM2-208ENST00000476594 SCNN1BP51168 640 aa10.31□□□□□ -0.76
CCM2-208ENST00000476594 BLKP51451 505 aa10.31□□□□□ -0.76
CCM2-208ENST00000476594 ADKP55263 362 aaKnown RBP10.31□□□□□ -0.76
CCM2-208ENST00000476594 ILKQ13418 452 aa10.31□□□□□ -0.76
CCM2-208ENST00000476594 SPA17Q15506 151 aa10.31□□□□□ -0.76
CCM2-208ENST00000476594 TMEM52BQ4KMG9 183 aa10.31□□□□□ -0.76
CCM2-208ENST00000476594 MARC1Q5VT66 337 aa10.31□□□□□ -0.76
CCM2-208ENST00000476594 UNQ6494/PRO21346Q6UXR6 183 aa10.31□□□□□ -0.76
CCM2-208ENST00000476594 GCNT7Q6ZNI0 430 aa10.31□□□□□ -0.76
CCM2-208ENST00000476594 Q6ZSR6 202 aa10.31□□□□□ -0.76
CCM2-208ENST00000476594 RAB44Q7Z6P3 723 aaPredicted RBP10.31□□□□□ -0.76
CCM2-208ENST00000476594 GATAD2AQ86YP4 633 aa10.31□□□□□ -0.76
CCM2-208ENST00000476594 NPWQ8N729 165 aa10.31□□□□□ -0.76
CCM2-208ENST00000476594 TSEN2Q8NCE0 465 aaKnown RBP10.31□□□□□ -0.76
CCM2-208ENST00000476594 OR13H1Q8NG92 308 aa10.31□□□□□ -0.76
CCM2-208ENST00000476594 MAK16Q9BXY0 300 aaKnown RBP10.31□□□□□ -0.76
CCM2-208ENST00000476594 FZD3Q9NPG1 666 aa10.31□□□□□ -0.76
CCM2-208ENST00000476594 SCUBE2Q9NQ36 999 aa10.31□□□□□ -0.76
CCM2-208ENST00000476594 NCKIPSDQ9NZQ3 722 aa10.31□□□□□ -0.76
CCM2-208ENST00000476594 AMACRQ9UHK6 382 aa10.31□□□□□ -0.76
CCM2-208ENST00000476594 NENFQ9UMX5 172 aa10.31□□□□□ -0.76
CCM2-208ENST00000476594 ATP8A1Q9Y2Q0 1164 aa10.31□□□□□ -0.76
CCM2-208ENST00000476594 TMEM131Q92545 1883 aa10.3□□□□□ -0.76
CCM2-208ENST00000476594 SPTY2D1-AS1A0A0U1RR47 76 aa10.3□□□□□ -0.76
CCM2-208ENST00000476594 GOLGA8CPA6NN73 597 aa10.3□□□□□ -0.76
CCM2-208ENST00000476594 GOLGA6L6A8MZA4 724 aa10.3□□□□□ -0.76
CCM2-208ENST00000476594 ZNF487B1APH4 448 aa10.3□□□□□ -0.76
CCM2-208ENST00000476594 RFPL3O75679 317 aa10.3□□□□□ -0.76
CCM2-208ENST00000476594 CYP2A6P11509 494 aaPredicted RBP10.3□□□□□ -0.76
CCM2-208ENST00000476594 TIMP2P16035 220 aa10.3□□□□□ -0.76
CCM2-208ENST00000476594 ZFXP17010 805 aaPredicted RBP10.3□□□□□ -0.76
CCM2-208ENST00000476594 MMP13P45452 471 aa10.3□□□□□ -0.76
CCM2-208ENST00000476594 PEX5P50542 639 aa10.3□□□□□ -0.76
CCM2-208ENST00000476594 DUSP3P51452 185 aaPredicted RBP10.3□□□□□ -0.76
CCM2-208ENST00000476594 CLDN2P57739 230 aa10.3□□□□□ -0.76
CCM2-208ENST00000476594 FAM193AP78312 1265 aa10.3□□□□□ -0.76
CCM2-208ENST00000476594 DAB2P98082 770 aa10.3□□□□□ -0.76
CCM2-208ENST00000476594 PDE1CQ14123 709 aaPredicted RBP10.3□□□□□ -0.76
CCM2-208ENST00000476594 MESDQ14696 234 aa10.3□□□□□ -0.76
CCM2-208ENST00000476594 LRRC14Q15048 493 aa10.3□□□□□ -0.76
CCM2-208ENST00000476594 IFI16Q16666 785 aaKnown RBP10.3□□□□□ -0.76
CCM2-208ENST00000476594 ASTE1Q2TB18 679 aaPredicted RBP10.3□□□□□ -0.76
CCM2-208ENST00000476594 PRAMEF14Q5SWL7 426 aa10.3□□□□□ -0.76
CCM2-208ENST00000476594 BZW1Q7L1Q6 419 aaKnown RBP10.3□□□□□ -0.76
CCM2-208ENST00000476594 VSIG1Q86XK7 387 aa10.3□□□□□ -0.76
CCM2-208ENST00000476594 SPATS2Q86XZ4 545 aaKnown RBP10.3□□□□□ -0.76
CCM2-208ENST00000476594 CCDC170Q8IYT3 715 aa10.3□□□□□ -0.76
CCM2-208ENST00000476594 CHCHD4Q8N4Q1 142 aa10.3□□□□□ -0.76
CCM2-208ENST00000476594 EID2Q8N6I1 236 aa10.3□□□□□ -0.76
CCM2-208ENST00000476594 SLC35G2Q8TBE7 412 aa10.3□□□□□ -0.76
CCM2-208ENST00000476594 FAM71BQ8TC56 605 aa10.3□□□□□ -0.76
CCM2-208ENST00000476594 GLMNQ92990 594 aa10.3□□□□□ -0.76
CCM2-208ENST00000476594 CALR3Q96L12 384 aaKnown RBP10.3□□□□□ -0.76
CCM2-208ENST00000476594 NUDCD1Q96RS6 583 aa10.3□□□□□ -0.76
CCM2-208ENST00000476594 POLR1EQ9GZS1 481 aaKnown RBP10.3□□□□□ -0.76
CCM2-208ENST00000476594 USP29Q9HBJ7 922 aa10.3□□□□□ -0.76
CCM2-208ENST00000476594 PCDH12Q9NPG4 1184 aa10.3□□□□□ -0.76
CCM2-208ENST00000476594 DNAJC28Q9NX36 388 aa10.3□□□□□ -0.76
CCM2-208ENST00000476594 DDX56Q9NY93 547 aaKnown RBP10.3□□□□□ -0.76
CCM2-208ENST00000476594 DNPEPQ9ULA0 475 aa10.3□□□□□ -0.76
CCM2-208ENST00000476594 ITM2BQ9Y287 266 aa10.3□□□□□ -0.76
CCM2-208ENST00000476594 CA5BQ9Y2D0 317 aa10.3□□□□□ -0.76
CCM2-208ENST00000476594 BTBD3Q9Y2F9 522 aa10.3□□□□□ -0.76
CCM2-208ENST00000476594 CHD8Q9HCK8 2581 aa10.3□□□□□ -0.76
CCM2-208ENST00000476594 TP53BP1Q12888 1972 aaPredicted RBP10.3□□□□□ -0.76
CCM2-208ENST00000476594 COL5A1P20908 1838 aaPredicted RBP10.29□□□□□ -0.76
CCM2-208ENST00000476594 LRRD1A4D1F6 860 aa10.29□□□□□ -0.76
CCM2-208ENST00000476594 FAM221BA6H8Z2 402 aa10.29□□□□□ -0.76
CCM2-208ENST00000476594 RNF103O00237 685 aa10.29□□□□□ -0.76
CCM2-208ENST00000476594 INSIG1O15503 277 aa10.29□□□□□ -0.76
CCM2-208ENST00000476594 SPOPO43791 374 aa10.29□□□□□ -0.76
CCM2-208ENST00000476594 MAFKO60675 156 aa10.29□□□□□ -0.76
CCM2-208ENST00000476594 MMP20O60882 483 aa10.29□□□□□ -0.76
CCM2-208ENST00000476594 MTA2O94776 668 aa10.29□□□□□ -0.76
CCM2-208ENST00000476594 CPP00450 1065 aa10.29□□□□□ -0.76
CCM2-208ENST00000476594 PROS1P07225 676 aa10.29□□□□□ -0.76
CCM2-208ENST00000476594 ELFN1P0C7U0 828 aa10.29□□□□□ -0.76
CCM2-208ENST00000476594 TCF4P15884 667 aa10.29□□□□□ -0.76
CCM2-208ENST00000476594 CKMT2P17540 419 aa10.29□□□□□ -0.76
CCM2-208ENST00000476594 KELP23276 732 aa10.29□□□□□ -0.76
CCM2-208ENST00000476594 MMP12P39900 470 aa10.29□□□□□ -0.76
CCM2-208ENST00000476594 GARSP41250 739 aaKnown RBP10.29□□□□□ -0.76
CCM2-208ENST00000476594 ITKQ08881 620 aa10.29□□□□□ -0.76
CCM2-208ENST00000476594 SLC10A7Q0GE19 358 aa10.29□□□□□ -0.76
CCM2-208ENST00000476594 BNIP3Q12983 259 aa10.29□□□□□ -0.76
CCM2-208ENST00000476594 DPYSL3Q14195 570 aa10.29□□□□□ -0.76
CCM2-208ENST00000476594 PAFAH1B3Q15102 231 aaKnown RBP10.29□□□□□ -0.76
CCM2-208ENST00000476594 ST3GAL2Q16842 350 aa10.29□□□□□ -0.76
CCM2-208ENST00000476594 CCDC157Q569K6 752 aa10.29□□□□□ -0.76
CCM2-208ENST00000476594 ANKRD20A8PQ5CZ79 823 aa10.29□□□□□ -0.76
CCM2-208ENST00000476594 LRRC38Q5VT99 294 aa10.29□□□□□ -0.76
CCM2-208ENST00000476594 USP45Q70EL2 814 aa10.29□□□□□ -0.76
CCM2-208ENST00000476594 CAMK1DQ8IU85 385 aa10.29□□□□□ -0.76
CCM2-208ENST00000476594 RHOT1Q8IXI2 618 aa10.29□□□□□ -0.76
CCM2-208ENST00000476594 TXLNBQ8N3L3 684 aa10.29□□□□□ -0.76
CCM2-208ENST00000476594 PDCD6IPQ8WUM4 868 aaKnown RBP10.29□□□□□ -0.76
CCM2-208ENST00000476594 TSC1Q92574 1164 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms