RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 KRT19P08727 400 aa6.94□□□□□ -1.3
UBR4-212ENST00000475973 ZCCHC18P0CG32 403 aa6.94□□□□□ -1.3
UBR4-212ENST00000475973 BMP1P13497 986 aa6.94□□□□□ -1.3
UBR4-212ENST00000475973 GOT1P17174 413 aa6.94□□□□□ -1.3
UBR4-212ENST00000475973 TFEBP19484 476 aa6.94□□□□□ -1.3
UBR4-212ENST00000475973 PTPN3P26045 913 aa6.94□□□□□ -1.3
UBR4-212ENST00000475973 PSMB4P28070 264 aa6.94□□□□□ -1.3
UBR4-212ENST00000475973 GABRB3P28472 473 aa6.94□□□□□ -1.3
UBR4-212ENST00000475973 LRPAP1P30533 357 aa6.94□□□□□ -1.3
UBR4-212ENST00000475973 HOXC13P31276 330 aa6.94□□□□□ -1.3
UBR4-212ENST00000475973 CD52P31358 61 aa6.94□□□□□ -1.3
UBR4-212ENST00000475973 GARSP41250 739 aaKnown RBP6.94□□□□□ -1.3
UBR4-212ENST00000475973 SLC19A1P41440 591 aa6.94□□□□□ -1.3
UBR4-212ENST00000475973 DPP6P42658 865 aa6.94□□□□□ -1.3
UBR4-212ENST00000475973 HSPA13P48723 471 aa6.94□□□□□ -1.3
UBR4-212ENST00000475973 RGS7P49802 495 aa6.94□□□□□ -1.3
UBR4-212ENST00000475973 KCNQ1P51787 676 aa6.94□□□□□ -1.3
UBR4-212ENST00000475973 EPHA4P54764 986 aa6.94□□□□□ -1.3
UBR4-212ENST00000475973 INHBCP55103 352 aa6.94□□□□□ -1.3
UBR4-212ENST00000475973 CDC42EP1Q00587 391 aa6.94□□□□□ -1.3
UBR4-212ENST00000475973 MYBPC1Q00872 1141 aa6.94□□□□□ -1.3
UBR4-212ENST00000475973 MS4A2Q01362 244 aa6.94□□□□□ -1.3
UBR4-212ENST00000475973 TMEM62Q0P6H9 643 aa6.94□□□□□ -1.3
UBR4-212ENST00000475973 GALNT2Q10471 571 aa6.94□□□□□ -1.3
UBR4-212ENST00000475973 TRAP1Q12931 704 aaKnown RBP6.94□□□□□ -1.3
UBR4-212ENST00000475973 PRKAA1Q13131 559 aa6.94□□□□□ -1.3
UBR4-212ENST00000475973 CEACAM7Q14002 265 aa6.94□□□□□ -1.3
UBR4-212ENST00000475973 TSTD2Q5T7W7 516 aa6.94□□□□□ -1.3
UBR4-212ENST00000475973 LIPMQ5VYY2 423 aa6.94□□□□□ -1.3
UBR4-212ENST00000475973 C9orf57Q5W0N0 161 aa6.94□□□□□ -1.3
UBR4-212ENST00000475973 LPCAT4Q643R3 524 aa6.94□□□□□ -1.3
UBR4-212ENST00000475973 PM20D1Q6GTS8 502 aa6.94□□□□□ -1.3
UBR4-212ENST00000475973 C16orf89Q6UX73 402 aa6.94□□□□□ -1.3
UBR4-212ENST00000475973 BHLHA9Q7RTU4 235 aa6.94□□□□□ -1.3
UBR4-212ENST00000475973 GALNT7Q86SF2 657 aa6.94□□□□□ -1.3
UBR4-212ENST00000475973 ACOT1Q86TX2 421 aa6.94□□□□□ -1.3
UBR4-212ENST00000475973 ZC3HC1Q86WB0 502 aaKnown RBP6.94□□□□□ -1.3
UBR4-212ENST00000475973 CDR2LQ86X02 465 aaPredicted RBP6.94□□□□□ -1.3
UBR4-212ENST00000475973 EGFL6Q8IUX8 553 aa6.94□□□□□ -1.3
UBR4-212ENST00000475973 CHERPQ8IWX8 916 aaKnown RBP6.94□□□□□ -1.3
UBR4-212ENST00000475973 CMTR2Q8IYT2 770 aaKnown RBP6.94□□□□□ -1.3
UBR4-212ENST00000475973 DSELQ8IZU8 1212 aa6.94□□□□□ -1.3
UBR4-212ENST00000475973 KYQ8NBH2 561 aa6.94□□□□□ -1.3
UBR4-212ENST00000475973 HMGCLL1Q8TB92 370 aa6.94□□□□□ -1.3
UBR4-212ENST00000475973 URGCPQ8TCY9 931 aa6.94□□□□□ -1.3
UBR4-212ENST00000475973 PPP4R1Q8TF05 950 aa6.94□□□□□ -1.3
UBR4-212ENST00000475973 RNF139Q8WU17 664 aa6.94□□□□□ -1.3
UBR4-212ENST00000475973 FATE1Q969F0 183 aa6.94□□□□□ -1.3
UBR4-212ENST00000475973 MRGPRX2Q96LB1 330 aa6.94□□□□□ -1.3
UBR4-212ENST00000475973 ZNF597Q96LX8 424 aa6.94□□□□□ -1.3
UBR4-212ENST00000475973 RILPQ96NA2 401 aa6.94□□□□□ -1.3
UBR4-212ENST00000475973 CYP2S1Q96SQ9 504 aa6.94□□□□□ -1.3
UBR4-212ENST00000475973 LGMNQ99538 433 aa6.94□□□□□ -1.3
UBR4-212ENST00000475973 MRPS26Q9BYN8 205 aaKnown RBP6.94□□□□□ -1.3
UBR4-212ENST00000475973 GBA3Q9H227 469 aa6.94□□□□□ -1.3
UBR4-212ENST00000475973 CXCL16Q9H2A7 254 aa6.94□□□□□ -1.3
UBR4-212ENST00000475973 RHOJQ9H4E5 214 aa6.94□□□□□ -1.3
UBR4-212ENST00000475973 DHX35Q9H5Z1 703 aaKnown RBP6.94□□□□□ -1.3
UBR4-212ENST00000475973 LRRC4Q9HBW1 653 aa6.94□□□□□ -1.3
UBR4-212ENST00000475973 ZBTB26Q9HCK0 441 aa6.94□□□□□ -1.3
UBR4-212ENST00000475973 TCF7L2Q9NQB0 619 aa6.94□□□□□ -1.3
UBR4-212ENST00000475973 NSMCE4AQ9NXX6 385 aa6.94□□□□□ -1.3
UBR4-212ENST00000475973 SLC17A6Q9P2U8 582 aa6.94□□□□□ -1.3
UBR4-212ENST00000475973 CD300AQ9UGN4 299 aa6.94□□□□□ -1.3
UBR4-212ENST00000475973 SEPT3Q9UH03 358 aa6.94□□□□□ -1.3
UBR4-212ENST00000475973 CIDEBQ9UHD4 219 aa6.94□□□□□ -1.3
UBR4-212ENST00000475973 IPO11Q9UI26 975 aaKnown RBP6.94□□□□□ -1.3
UBR4-212ENST00000475973 TRHDEQ9UKU6 1024 aa6.94□□□□□ -1.3
UBR4-212ENST00000475973 NEU3Q9UQ49 428 aa6.94□□□□□ -1.3
UBR4-212ENST00000475973 GMEB1Q9Y692 573 aa6.94□□□□□ -1.3
UBR4-212ENST00000475973 PRUNE2Q8WUY3 3088 aa6.94□□□□□ -1.3
UBR4-212ENST00000475973 PDCD11Q14690 1871 aaKnown RBP6.94□□□□□ -1.3
UBR4-212ENST00000475973 SCN1AP35498 2009 aa6.93□□□□□ -1.3
UBR4-212ENST00000475973 A0A096LPK6 155 aa6.93□□□□□ -1.3
UBR4-212ENST00000475973 C15orf38-AP3S2A0A0A6YYH1 394 aa6.93□□□□□ -1.3
UBR4-212ENST00000475973 CCDC195A0A1B0GUA6 201 aa6.93□□□□□ -1.3
UBR4-212ENST00000475973 TCRBV3S1A0A5B6 114 aa6.93□□□□□ -1.3
UBR4-212ENST00000475973 MEI4A8MW99 385 aa6.93□□□□□ -1.3
UBR4-212ENST00000475973 C5orf67F2Z3F1 127 aa6.93□□□□□ -1.3
UBR4-212ENST00000475973 ENPP3O14638 875 aa6.93□□□□□ -1.3
UBR4-212ENST00000475973 GPR182O15218 404 aa6.93□□□□□ -1.3
UBR4-212ENST00000475973 PSMD3O43242 534 aa6.93□□□□□ -1.3
UBR4-212ENST00000475973 DCXO43602 365 aa6.93□□□□□ -1.3
UBR4-212ENST00000475973 GPR32O75388 356 aa6.93□□□□□ -1.3
UBR4-212ENST00000475973 GRAP2O75791 330 aa6.93□□□□□ -1.3
UBR4-212ENST00000475973 CRTAMO95727 393 aa6.93□□□□□ -1.3
UBR4-212ENST00000475973 LTFP02788 710 aa6.93□□□□□ -1.3
UBR4-212ENST00000475973 ASLP04424 464 aa6.93□□□□□ -1.3
UBR4-212ENST00000475973 SLC35E2BP0CK96 405 aa6.93□□□□□ -1.3
UBR4-212ENST00000475973 KITP10721 976 aa6.93□□□□□ -1.3
UBR4-212ENST00000475973 DESP17661 470 aa6.93□□□□□ -1.3
UBR4-212ENST00000475973 XRCC1P18887 633 aaPredicted RBP6.93□□□□□ -1.3
UBR4-212ENST00000475973 KCNA5P22460 613 aa6.93□□□□□ -1.3
UBR4-212ENST00000475973 TYK2P29597 1187 aa6.93□□□□□ -1.3
UBR4-212ENST00000475973 ADRA1AP35348 466 aa6.93□□□□□ -1.3
UBR4-212ENST00000475973 ADRA1BP35368 520 aa6.93□□□□□ -1.3
UBR4-212ENST00000475973 BMPR1AP36894 532 aa6.93□□□□□ -1.3
UBR4-212ENST00000475973 PPARGP37231 505 aaPredicted RBP6.93□□□□□ -1.3
UBR4-212ENST00000475973 ARL4AP40617 200 aa6.93□□□□□ -1.3
UBR4-212ENST00000475973 ARCN1P48444 511 aaKnown RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms