RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 RIPOR3Q96MK2 946 aa14.73□□□□□ -0.05
HIF3A-206ENST00000472815 TRIB3Q96RU7 358 aa14.73□□□□□ -0.05
HIF3A-206ENST00000472815 SRPK1Q96SB4 655 aaKnown RBP14.73□□□□□ -0.05
HIF3A-206ENST00000472815 TREX1Q9NSU2 369 aa14.73□□□□□ -0.05
HIF3A-206ENST00000472815 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.73□□□□□ -0.05
HIF3A-206ENST00000472815 HACD3Q9P035 362 aa14.73□□□□□ -0.05
HIF3A-206ENST00000472815 CDH7Q9ULB5 785 aa14.73□□□□□ -0.05
HIF3A-206ENST00000472815 CLEC4EQ9ULY5 219 aa14.73□□□□□ -0.05
HIF3A-206ENST00000472815 TM9SF1O15321 606 aa14.72□□□□□ -0.05
HIF3A-206ENST00000472815 HOXC11O43248 304 aaPredicted RBP14.72□□□□□ -0.05
HIF3A-206ENST00000472815 SOCS5O75159 536 aa14.72□□□□□ -0.05
HIF3A-206ENST00000472815 VAPBO95292 243 aa14.72□□□□□ -0.05
HIF3A-206ENST00000472815 POLR2EP19388 210 aaKnown RBP14.72□□□□□ -0.05
HIF3A-206ENST00000472815 LSP1P33241 339 aa14.72□□□□□ -0.05
HIF3A-206ENST00000472815 EPHB1P54762 984 aa14.72□□□□□ -0.05
HIF3A-206ENST00000472815 RPL26P61254 145 aaKnown RBP14.72□□□□□ -0.05
HIF3A-206ENST00000472815 PRAMEP78395 509 aa14.72□□□□□ -0.05
HIF3A-206ENST00000472815 ECT2LQ008S8 904 aa14.72□□□□□ -0.05
HIF3A-206ENST00000472815 BCL2L1Q07817 233 aa14.72□□□□□ -0.05
HIF3A-206ENST00000472815 GALNT3Q14435 633 aa14.72□□□□□ -0.05
HIF3A-206ENST00000472815 GRIN2CQ14957 1233 aa14.72□□□□□ -0.05
HIF3A-206ENST00000472815 FUT11Q495W5 492 aa14.72□□□□□ -0.05
HIF3A-206ENST00000472815 TEDDM1Q5T9Z0 273 aa14.72□□□□□ -0.05
HIF3A-206ENST00000472815 TIFABQ6ZNK6 161 aa14.72□□□□□ -0.05
HIF3A-206ENST00000472815 STRA8Q7Z7C7 330 aa14.72□□□□□ -0.05
HIF3A-206ENST00000472815 UNC5BQ8IZJ1 945 aa14.72□□□□□ -0.05
HIF3A-206ENST00000472815 C4orf33Q8N1A6 199 aa14.72□□□□□ -0.05
HIF3A-206ENST00000472815 PAF1Q8N7H5 531 aa14.72□□□□□ -0.05
HIF3A-206ENST00000472815 BLOC1S5Q8TDH9 187 aa14.72□□□□□ -0.05
HIF3A-206ENST00000472815 ACMSDQ8TDX5 336 aa14.72□□□□□ -0.05
HIF3A-206ENST00000472815 LMLNQ96KR4 655 aa14.72□□□□□ -0.05
HIF3A-206ENST00000472815 ATP13A3Q9H7F0 1226 aa14.72□□□□□ -0.05
HIF3A-206ENST00000472815 ZFP14Q9HCL3 533 aa14.72□□□□□ -0.05
HIF3A-206ENST00000472815 RPL26L1Q9UNX3 145 aaKnown RBP14.72□□□□□ -0.05
HIF3A-206ENST00000472815 CHKBQ9Y259 395 aa14.72□□□□□ -0.05
HIF3A-206ENST00000472815 A0A1W2PPM1 405 aa14.72□□□□□ -0.05
HIF3A-206ENST00000472815 MROH6A6NGR9 719 aa14.72□□□□□ -0.05
HIF3A-206ENST00000472815 C2orf81A6NN90 581 aa14.72□□□□□ -0.05
HIF3A-206ENST00000472815 GSRP00390 522 aa14.72□□□□□ -0.05
HIF3A-206ENST00000472815 CYP17A1P05093 508 aa14.72□□□□□ -0.05
HIF3A-206ENST00000472815 SERPINA4P29622 427 aa14.72□□□□□ -0.05
HIF3A-206ENST00000472815 GRIA4P48058 902 aa14.72□□□□□ -0.05
HIF3A-206ENST00000472815 IL9RQ01113 521 aa14.72□□□□□ -0.05
HIF3A-206ENST00000472815 EML3Q32P44 896 aa14.72□□□□□ -0.05
HIF3A-206ENST00000472815 ARMC12Q5T9G4 340 aa14.72□□□□□ -0.05
HIF3A-206ENST00000472815 MROH9Q5TGP6 573 aa14.72□□□□□ -0.05
HIF3A-206ENST00000472815 ESRP1Q6NXG1 681 aaKnown RBP14.72□□□□□ -0.05
HIF3A-206ENST00000472815 KIAA0408Q6ZU52 694 aa14.72□□□□□ -0.05
HIF3A-206ENST00000472815 CNTN4Q8IWV2 1026 aa14.72□□□□□ -0.05
HIF3A-206ENST00000472815 PCDH20Q8N6Y1 951 aaKnown RBP14.72□□□□□ -0.05
HIF3A-206ENST00000472815 ANKRD42Q8N9B4 389 aa14.72□□□□□ -0.05
HIF3A-206ENST00000472815 OR2AP1Q8NGE2 309 aa14.72□□□□□ -0.05
HIF3A-206ENST00000472815 STYXQ8WUJ0 223 aa14.72□□□□□ -0.05
HIF3A-206ENST00000472815 PDCD6IPQ8WUM4 868 aaKnown RBP14.72□□□□□ -0.05
HIF3A-206ENST00000472815 PTPRN2Q92932 1015 aa14.72□□□□□ -0.05
HIF3A-206ENST00000472815 APOPT1Q96IL0 206 aa14.72□□□□□ -0.05
HIF3A-206ENST00000472815 TUBGCP5Q96RT8 1024 aa14.72□□□□□ -0.05
HIF3A-206ENST00000472815 RBBP8Q99708 897 aa14.72□□□□□ -0.05
HIF3A-206ENST00000472815 IARS2Q9NSE4 1012 aaKnown RBP14.72□□□□□ -0.05
HIF3A-206ENST00000472815 INTS6Q9UL03 887 aaKnown RBP14.72□□□□□ -0.05
HIF3A-206ENST00000472815 HEPACAM2A8MVW5 462 aa14.71□□□□□ -0.05
HIF3A-206ENST00000472815 ANKRD66B4E2M5 251 aa14.71□□□□□ -0.05
HIF3A-206ENST00000472815 COPEO14579 308 aa14.71□□□□□ -0.05
HIF3A-206ENST00000472815 SLC7A4O43246 635 aa14.71□□□□□ -0.05
HIF3A-206ENST00000472815 GJB3O75712 270 aa14.71□□□□□ -0.05
HIF3A-206ENST00000472815 MT-CO1P00395 513 aa14.71□□□□□ -0.05
HIF3A-206ENST00000472815 ASLP04424 464 aa14.71□□□□□ -0.05
HIF3A-206ENST00000472815 ATP5BP06576 529 aaKnown RBP14.71□□□□□ -0.05
HIF3A-206ENST00000472815 ITGA2BP08514 1039 aa14.71□□□□□ -0.05
HIF3A-206ENST00000472815 SRCP12931 536 aa14.71□□□□□ -0.05
HIF3A-206ENST00000472815 VIPR2P41587 438 aa14.71□□□□□ -0.05
HIF3A-206ENST00000472815 RECQLP46063 649 aaPredicted RBP14.71□□□□□ -0.05
HIF3A-206ENST00000472815 CCT5P48643 541 aa14.71□□□□□ -0.05
HIF3A-206ENST00000472815 DGKGP49619 791 aa14.71□□□□□ -0.05
HIF3A-206ENST00000472815 ADAM15Q13444 863 aa14.71□□□□□ -0.05
HIF3A-206ENST00000472815 IHHQ14623 411 aa14.71□□□□□ -0.05
HIF3A-206ENST00000472815 TAF1AQ15573 450 aaPredicted RBP14.71□□□□□ -0.05
HIF3A-206ENST00000472815 CNGA3Q16281 694 aa14.71□□□□□ -0.05
HIF3A-206ENST00000472815 GLT6D1Q7Z4J2 308 aa14.71□□□□□ -0.05
HIF3A-206ENST00000472815 TAX1BP1Q86VP1 789 aa14.71□□□□□ -0.05
HIF3A-206ENST00000472815 RNF135Q8IUD6 432 aa14.71□□□□□ -0.05
HIF3A-206ENST00000472815 YAF2Q8IY57 180 aa14.71□□□□□ -0.05
HIF3A-206ENST00000472815 NDUFAF2Q8N183 169 aa14.71□□□□□ -0.05
HIF3A-206ENST00000472815 LPCAT1Q8NF37 534 aa14.71□□□□□ -0.05
HIF3A-206ENST00000472815 MDM1Q8TC05 714 aa14.71□□□□□ -0.05
HIF3A-206ENST00000472815 CABS1Q96KC9 395 aa14.71□□□□□ -0.05
HIF3A-206ENST00000472815 ZNF778Q96MU6 729 aa14.71□□□□□ -0.05
HIF3A-206ENST00000472815 APOL5Q9BWW9 433 aa14.71□□□□□ -0.05
HIF3A-206ENST00000472815 TM6SF2Q9BZW4 377 aa14.71□□□□□ -0.05
HIF3A-206ENST00000472815 PCDHGC4Q9Y5F7 938 aa14.71□□□□□ -0.05
HIF3A-206ENST00000472815 A0A1W2PQ67 120 aa14.7□□□□□ -0.06
HIF3A-206ENST00000472815 UGT1A9O60656 530 aa14.7□□□□□ -0.06
HIF3A-206ENST00000472815 SIN3BO75182 1162 aa14.7□□□□□ -0.06
HIF3A-206ENST00000472815 SPAG7O75391 227 aa14.7□□□□□ -0.06
HIF3A-206ENST00000472815 CREB1P16220 341 aa14.7□□□□□ -0.06
HIF3A-206ENST00000472815 POU3F3P20264 500 aaPredicted RBP14.7□□□□□ -0.06
HIF3A-206ENST00000472815 MTHFRP42898 656 aa14.7□□□□□ -0.06
HIF3A-206ENST00000472815 POLD2P49005 469 aa14.7□□□□□ -0.06
HIF3A-206ENST00000472815 LIMK2P53671 638 aa14.7□□□□□ -0.06
HIF3A-206ENST00000472815 SLC18A2Q05940 514 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms