RNA–Protein interactions for RNA: ENST00000472564.1

LAMP1-203, Transcript of lysosomal associated membrane protein 1, humanhuman

TSL 2

Gene LAMP1, Length 5,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1-203ENST00000472564 RNFT2Q96EX2 444 aa17.3■□□□□ 0.36
LAMP1-203ENST00000472564 ZFP42Q96MM3 310 aa17.3■□□□□ 0.36
LAMP1-203ENST00000472564 CLK4Q9HAZ1 481 aaKnown RBP17.3■□□□□ 0.36
LAMP1-203ENST00000472564 GLOD4Q9HC38 313 aa17.3■□□□□ 0.36
LAMP1-203ENST00000472564 TMEM216Q9P0N5 145 aa17.3■□□□□ 0.36
LAMP1-203ENST00000472564 MFSD11O43934 449 aa17.3■□□□□ 0.36
LAMP1-203ENST00000472564 LINC00032P0C843 101 aa17.3■□□□□ 0.36
LAMP1-203ENST00000472564 C9orf57Q5W0N0 161 aa17.3■□□□□ 0.36
LAMP1-203ENST00000472564 RINLQ6ZS11 566 aa17.3■□□□□ 0.36
LAMP1-203ENST00000472564 CPNE8Q86YQ8 564 aa17.3■□□□□ 0.36
LAMP1-203ENST00000472564 C10orf53Q8N6V4 93 aa17.3■□□□□ 0.36
LAMP1-203ENST00000472564 SDCBP2Q9H190 292 aa17.3■□□□□ 0.36
LAMP1-203ENST00000472564 NOL6Q9H6R4 1146 aaKnown RBP17.3■□□□□ 0.36
LAMP1-203ENST00000472564 APOBEC3GQ9HC16 384 aaKnown RBP17.3■□□□□ 0.36
LAMP1-203ENST00000472564 CDH22Q9UJ99 828 aa17.3■□□□□ 0.36
LAMP1-203ENST00000472564 C5orf60A6NFR6 353 aa17.3■□□□□ 0.36
LAMP1-203ENST00000472564 SERPINA4P29622 427 aa17.3■□□□□ 0.36
LAMP1-203ENST00000472564 RAB14P61106 215 aa17.3■□□□□ 0.36
LAMP1-203ENST00000472564 ATP6V0D1P61421 351 aa17.3■□□□□ 0.36
LAMP1-203ENST00000472564 TOP3AQ13472 1001 aaPredicted RBP17.3■□□□□ 0.36
LAMP1-203ENST00000472564 TMC5Q6UXY8 1006 aa17.3■□□□□ 0.36
LAMP1-203ENST00000472564 TOP6BLQ8N6T0 577 aa17.3■□□□□ 0.36
LAMP1-203ENST00000472564 C2orf49Q9BVC5 232 aaPredicted RBP17.3■□□□□ 0.36
LAMP1-203ENST00000472564 BCAS3Q9H6U6 928 aa17.3■□□□□ 0.36
LAMP1-203ENST00000472564 UNGP13051 313 aaPredicted RBP17.29■□□□□ 0.36
LAMP1-203ENST00000472564 IDO1P14902 403 aa17.29■□□□□ 0.36
LAMP1-203ENST00000472564 ARL2P36404 184 aa17.29■□□□□ 0.36
LAMP1-203ENST00000472564 RNF220Q5VTB9 566 aa17.29■□□□□ 0.36
LAMP1-203ENST00000472564 ANKS1BQ7Z6G8 1248 aa17.29■□□□□ 0.36
LAMP1-203ENST00000472564 FAM47BQ8NA70 645 aa17.29■□□□□ 0.36
LAMP1-203ENST00000472564 YME1L1Q96TA2 773 aa17.29■□□□□ 0.36
LAMP1-203ENST00000472564 GPR20Q99678 358 aa17.29■□□□□ 0.36
LAMP1-203ENST00000472564 M0R2N6 131 aa17.29■□□□□ 0.36
LAMP1-203ENST00000472564 RPL38P63173 70 aaKnown RBP17.29■□□□□ 0.36
LAMP1-203ENST00000472564 DGKKQ5KSL6 1271 aa17.29■□□□□ 0.36
LAMP1-203ENST00000472564 PRAMEF19Q5SWL8 479 aa17.29■□□□□ 0.36
LAMP1-203ENST00000472564 PMF1Q6P1K2 205 aa17.29■□□□□ 0.36
LAMP1-203ENST00000472564 DEFB128Q7Z7B8 93 aa17.29■□□□□ 0.36
LAMP1-203ENST00000472564 CYP4Z2PQ8N1L4 340 aa17.29■□□□□ 0.36
LAMP1-203ENST00000472564 CADM1Q9BY67 442 aaKnown RBP17.29■□□□□ 0.36
LAMP1-203ENST00000472564 ZCCHC2Q9C0B9 1178 aaKnown RBP17.29■□□□□ 0.36
LAMP1-203ENST00000472564 CHRAC1Q9NRG0 131 aa17.29■□□□□ 0.36
LAMP1-203ENST00000472564 ALDH1A2O94788 518 aa17.29■□□□□ 0.36
LAMP1-203ENST00000472564 CENPAP49450 140 aa17.29■□□□□ 0.36
LAMP1-203ENST00000472564 ATN1P54259 1190 aaPredicted RBP17.29■□□□□ 0.36
LAMP1-203ENST00000472564 BLMHQ13867 455 aa17.29■□□□□ 0.36
LAMP1-203ENST00000472564 PDZK1Q5T2W1 519 aa17.29■□□□□ 0.36
LAMP1-203ENST00000472564 VWA5B1Q5TIE3 1220 aa17.29■□□□□ 0.36
LAMP1-203ENST00000472564 LPPQ93052 612 aa17.29■□□□□ 0.36
LAMP1-203ENST00000472564 MYO5BQ9ULV0 1848 aa17.29■□□□□ 0.36
LAMP1-203ENST00000472564 CATP04040 527 aaKnown RBP17.29■□□□□ 0.36
LAMP1-203ENST00000472564 VAV1P15498 845 aa17.29■□□□□ 0.36
LAMP1-203ENST00000472564 FOXN2P32314 431 aa17.29■□□□□ 0.36
LAMP1-203ENST00000472564 TIGD2Q4W5G0 525 aa17.29■□□□□ 0.36
LAMP1-203ENST00000472564 NUAK2Q9H093 628 aa17.29■□□□□ 0.36
LAMP1-203ENST00000472564 BPIFA1Q9NP55 256 aa17.29■□□□□ 0.36
LAMP1-203ENST00000472564 LOC100506127A0A0U1RQW1 187 aa17.28■□□□□ 0.36
LAMP1-203ENST00000472564 MDM4O15151 490 aa17.28■□□□□ 0.36
LAMP1-203ENST00000472564 PLIN3O60664 434 aa17.28■□□□□ 0.36
LAMP1-203ENST00000472564 MFN2O95140 757 aa17.28■□□□□ 0.36
LAMP1-203ENST00000472564 PHKG1Q16816 387 aa17.28■□□□□ 0.36
LAMP1-203ENST00000472564 GPR107Q5VW38 600 aa17.28■□□□□ 0.36
LAMP1-203ENST00000472564 VSTM1Q6UX27 236 aa17.28■□□□□ 0.36
LAMP1-203ENST00000472564 SLC26A9Q7LBE3 791 aa17.28■□□□□ 0.36
LAMP1-203ENST00000472564 ADAMTSL2Q86TH1 951 aa17.28■□□□□ 0.36
LAMP1-203ENST00000472564 DSELQ8IZU8 1212 aa17.28■□□□□ 0.36
LAMP1-203ENST00000472564 EXOC2Q96KP1 924 aa17.28■□□□□ 0.36
LAMP1-203ENST00000472564 NIFKQ9BYG3 293 aaKnown RBP17.28■□□□□ 0.36
LAMP1-203ENST00000472564 SNX6Q9UNH7 406 aa17.28■□□□□ 0.36
LAMP1-203ENST00000472564 PLIN4Q96Q06 1357 aa17.28■□□□□ 0.36
LAMP1-203ENST00000472564 COL6A2P12110 1019 aa17.28■□□□□ 0.36
LAMP1-203ENST00000472564 HPCAL1P37235 193 aa17.28■□□□□ 0.36
LAMP1-203ENST00000472564 PURAQ00577 322 aaKnown RBP17.28■□□□□ 0.36
LAMP1-203ENST00000472564 ANGPT1Q15389 498 aa17.28■□□□□ 0.36
LAMP1-203ENST00000472564 TSNQ15631 228 aaKnown RBP17.28■□□□□ 0.36
LAMP1-203ENST00000472564 RGS21Q2M5E4 152 aa17.28■□□□□ 0.36
LAMP1-203ENST00000472564 GK5Q6ZS86 529 aa17.28■□□□□ 0.36
LAMP1-203ENST00000472564 ACSS2Q9NR19 701 aa17.28■□□□□ 0.36
LAMP1-203ENST00000472564 TMCO1Q9UM00 188 aa17.28■□□□□ 0.36
LAMP1-203ENST00000472564 DERAQ9Y315 318 aa17.28■□□□□ 0.36
LAMP1-203ENST00000472564 FAM25AB3EWG3 89 aa17.28■□□□□ 0.36
LAMP1-203ENST00000472564 FAM25CB3EWG5 89 aa17.28■□□□□ 0.36
LAMP1-203ENST00000472564 FAM25GB3EWG6 89 aa17.28■□□□□ 0.36
LAMP1-203ENST00000472564 RPL9P32969 192 aaKnown RBP17.28■□□□□ 0.36
LAMP1-203ENST00000472564 WDR4P57081 412 aaKnown RBP17.28■□□□□ 0.36
LAMP1-203ENST00000472564 ARL13AQ5H913 290 aaPredicted RBP17.28■□□□□ 0.36
LAMP1-203ENST00000472564 SH3BP5LQ7L8J4 393 aa17.28■□□□□ 0.36
LAMP1-203ENST00000472564 REPS1Q96D71 796 aa17.28■□□□□ 0.36
LAMP1-203ENST00000472564 KLHL5Q96PQ7 755 aa17.28■□□□□ 0.36
LAMP1-203ENST00000472564 TM6SF2Q9BZW4 377 aa17.28■□□□□ 0.36
LAMP1-203ENST00000472564 PLGRKTQ9HBL7 147 aa17.28■□□□□ 0.36
LAMP1-203ENST00000472564 ADAM30Q9UKF2 790 aa17.28■□□□□ 0.36
LAMP1-203ENST00000472564 ZMYND8Q9ULU4 1186 aaPredicted RBP17.28■□□□□ 0.36
LAMP1-203ENST00000472564 ANKRD26Q9UPS8 1709 aa17.28■□□□□ 0.36
LAMP1-203ENST00000472564 POLR2LP62875 67 aaKnown RBP17.28■□□□□ 0.36
LAMP1-203ENST00000472564 TIMM50Q3ZCQ8 353 aa17.28■□□□□ 0.36
LAMP1-203ENST00000472564 BRMS1LQ5PSV4 323 aa17.28■□□□□ 0.36
LAMP1-203ENST00000472564 SOCS4Q8WXH5 440 aa17.28■□□□□ 0.36
LAMP1-203ENST00000472564 QKIQ96PU8 341 aaKnown RBP eCLIP17.28■□□□□ 0.36
LAMP1-203ENST00000472564 KCTD15Q96SI1 283 aaPredicted RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms