RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 COL25A1Q9BXS0 654 aaPredicted RBP17■□□□□ 0.31
CCM2-205ENST00000472223 TDRD1Q9BXT4 1180 aaKnown RBP17■□□□□ 0.31
CCM2-205ENST00000472223 EPHX3Q9H6B9 360 aa17■□□□□ 0.31
CCM2-205ENST00000472223 EIF2B3Q9NR50 452 aaKnown RBP17■□□□□ 0.31
CCM2-205ENST00000472223 DKK3Q9UBP4 350 aa17■□□□□ 0.31
CCM2-205ENST00000472223 CHKBQ9Y259 395 aa17■□□□□ 0.31
CCM2-205ENST00000472223 NEU2Q9Y3R4 380 aa17■□□□□ 0.31
CCM2-205ENST00000472223 C16orf96A6NNT2 1141 aa16.99■□□□□ 0.31
CCM2-205ENST00000472223 NEMP1O14524 444 aa16.99■□□□□ 0.31
CCM2-205ENST00000472223 MID1O15344 667 aa16.99■□□□□ 0.31
CCM2-205ENST00000472223 ZNF217O75362 1048 aa16.99■□□□□ 0.31
CCM2-205ENST00000472223 GJB3O75712 270 aa16.99■□□□□ 0.31
CCM2-205ENST00000472223 RNASEH2AO75792 299 aaKnown RBP16.99■□□□□ 0.31
CCM2-205ENST00000472223 HEXIM1O94992 359 aaKnown RBP16.99■□□□□ 0.31
CCM2-205ENST00000472223 PGLSO95336 258 aa16.99■□□□□ 0.31
CCM2-205ENST00000472223 AP2A1O95782 977 aa16.99■□□□□ 0.31
CCM2-205ENST00000472223 NDST3O95803 873 aa16.99■□□□□ 0.31
CCM2-205ENST00000472223 CTSLP07711 333 aa16.99■□□□□ 0.31
CCM2-205ENST00000472223 HLA-DPA1P20036 260 aa16.99■□□□□ 0.31
CCM2-205ENST00000472223 TPSB2P20231 275 aa16.99■□□□□ 0.31
CCM2-205ENST00000472223 NEK3P51956 506 aa16.99■□□□□ 0.31
CCM2-205ENST00000472223 TRAF2Q12933 501 aa16.99■□□□□ 0.31
CCM2-205ENST00000472223 TPSAB1Q15661 275 aa16.99■□□□□ 0.31
CCM2-205ENST00000472223 POM121L1PQ3SYA9 428 aa16.99■□□□□ 0.31
CCM2-205ENST00000472223 TEX35Q5T0J7 233 aa16.99■□□□□ 0.31
CCM2-205ENST00000472223 FAM182AQ5T1J6 154 aa16.99■□□□□ 0.31
CCM2-205ENST00000472223 IZUMO3Q5VZ72 239 aa16.99■□□□□ 0.31
CCM2-205ENST00000472223 ERN2Q76MJ5 926 aaKnown RBP16.99■□□□□ 0.31
CCM2-205ENST00000472223 NOA1Q8NC60 698 aaKnown RBP16.99■□□□□ 0.31
CCM2-205ENST00000472223 LPCAT1Q8NF37 534 aa16.99■□□□□ 0.31
CCM2-205ENST00000472223 RAB7BQ96AH8 199 aa16.99■□□□□ 0.31
CCM2-205ENST00000472223 OXNAD1Q96HP4 312 aaPredicted RBP16.99■□□□□ 0.31
CCM2-205ENST00000472223 FICDQ9BVA6 458 aa16.99■□□□□ 0.31
CCM2-205ENST00000472223 MKRN2Q9H000 416 aaKnown RBP16.99■□□□□ 0.31
CCM2-205ENST00000472223 PABPC3Q9H361 631 aaKnown RBP16.99■□□□□ 0.31
CCM2-205ENST00000472223 FBXL12Q9NXK8 326 aa16.99■□□□□ 0.31
CCM2-205ENST00000472223 DLGAP2Q9P1A6 1054 aa16.99■□□□□ 0.31
CCM2-205ENST00000472223 ANAPC5Q9UJX4 755 aa16.99■□□□□ 0.31
CCM2-205ENST00000472223 DNALI1O14645 258 aaPredicted RBP16.98■□□□□ 0.31
CCM2-205ENST00000472223 HTRA2O43464 458 aaPredicted RBP16.98■□□□□ 0.31
CCM2-205ENST00000472223 PAPSS2O95340 614 aaPredicted RBP16.98■□□□□ 0.31
CCM2-205ENST00000472223 FGF1P05230 155 aa16.98■□□□□ 0.31
CCM2-205ENST00000472223 CYP2A6P11509 494 aaPredicted RBP16.98■□□□□ 0.31
CCM2-205ENST00000472223 GABRG2P18507 467 aa16.98■□□□□ 0.31
CCM2-205ENST00000472223 NDUFV2P19404 249 aa16.98■□□□□ 0.31
CCM2-205ENST00000472223 OXTRP30559 389 aa16.98■□□□□ 0.31
CCM2-205ENST00000472223 GRIA4P48058 902 aa16.98■□□□□ 0.31
CCM2-205ENST00000472223 MRPS25P82663 173 aaKnown RBP16.98■□□□□ 0.31
CCM2-205ENST00000472223 SLC7A5Q01650 507 aa16.98■□□□□ 0.31
CCM2-205ENST00000472223 GUCY2DQ02846 1103 aa16.98■□□□□ 0.31
CCM2-205ENST00000472223 CAV1Q03135 178 aa16.98■□□□□ 0.31
CCM2-205ENST00000472223 ELP6Q0PNE2 266 aa16.98■□□□□ 0.31
CCM2-205ENST00000472223 KDELC1Q6UW63 502 aa16.98■□□□□ 0.31
CCM2-205ENST00000472223 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.98■□□□□ 0.31
CCM2-205ENST00000472223 USP30Q70CQ3 517 aa16.98■□□□□ 0.31
CCM2-205ENST00000472223 USP45Q70EL2 814 aa16.98■□□□□ 0.31
CCM2-205ENST00000472223 HOOK3Q86VS8 718 aa16.98■□□□□ 0.31
CCM2-205ENST00000472223 C1orf210Q8IVY1 113 aa16.98■□□□□ 0.31
CCM2-205ENST00000472223 IFT20Q8IY31 132 aa16.98■□□□□ 0.31
CCM2-205ENST00000472223 DTWD2Q8NBA8 298 aa16.98■□□□□ 0.31
CCM2-205ENST00000472223 UBXN4Q92575 508 aa16.98■□□□□ 0.31
CCM2-205ENST00000472223 TADA1Q96BN2 335 aa16.98■□□□□ 0.31
CCM2-205ENST00000472223 MRGPRX2Q96LB1 330 aa16.98■□□□□ 0.31
CCM2-205ENST00000472223 MLPHQ9BV36 600 aaPredicted RBP16.98■□□□□ 0.31
CCM2-205ENST00000472223 C1QTNF1Q9BXJ1 281 aa16.98■□□□□ 0.31
CCM2-205ENST00000472223 HDAC8Q9BY41 377 aa16.98■□□□□ 0.31
CCM2-205ENST00000472223 FRMD8Q9BZ67 464 aaPredicted RBP16.98■□□□□ 0.31
CCM2-205ENST00000472223 DPH5Q9H2P9 285 aa16.98■□□□□ 0.31
CCM2-205ENST00000472223 FAM114A2Q9NRY5 505 aa16.98■□□□□ 0.31
CCM2-205ENST00000472223 SARDHQ9UL12 918 aa16.98■□□□□ 0.31
CCM2-205ENST00000472223 SNX24Q9Y343 169 aa16.98■□□□□ 0.31
CCM2-205ENST00000472223 ANKRD66B4E2M5 251 aa16.97■□□□□ 0.31
CCM2-205ENST00000472223 TRAFD1O14545 582 aaPredicted RBP16.97■□□□□ 0.31
CCM2-205ENST00000472223 SLC7A4O43246 635 aa16.97■□□□□ 0.31
CCM2-205ENST00000472223 SLC34A2O95436 690 aa16.97■□□□□ 0.31
CCM2-205ENST00000472223 RHOXF2BP0C7M4 288 aa16.97■□□□□ 0.31
CCM2-205ENST00000472223 FAM193AP78312 1265 aa16.97■□□□□ 0.31
CCM2-205ENST00000472223 CDH17Q12864 832 aa16.97■□□□□ 0.31
CCM2-205ENST00000472223 LAMB3Q13751 1172 aa16.97■□□□□ 0.31
CCM2-205ENST00000472223 MORF4L2Q15014 288 aa16.97■□□□□ 0.31
CCM2-205ENST00000472223 UGP2Q16851 508 aa16.97■□□□□ 0.31
CCM2-205ENST00000472223 SYCP2LQ5T4T6 812 aa16.97■□□□□ 0.31
CCM2-205ENST00000472223 SLC25A41Q8N5S1 370 aa16.97■□□□□ 0.31
CCM2-205ENST00000472223 ECHDC3Q96DC8 303 aa16.97■□□□□ 0.31
CCM2-205ENST00000472223 RHOXF2Q9BQY4 288 aa16.97■□□□□ 0.31
CCM2-205ENST00000472223 POLR3BQ9NW08 1133 aaPredicted RBP16.97■□□□□ 0.31
CCM2-205ENST00000472223 WHRNQ9P202 907 aa16.97■□□□□ 0.31
CCM2-205ENST00000472223 EBF1Q9UH73 591 aa16.97■□□□□ 0.31
CCM2-205ENST00000472223 FZD4Q9ULV1 537 aa16.97■□□□□ 0.31
CCM2-205ENST00000472223 LOC285095A0A1B0GVY8 99 aa16.96■□□□□ 0.31
CCM2-205ENST00000472223 A0A1W2PP55 124 aa16.96■□□□□ 0.31
CCM2-205ENST00000472223 UPK3BL1B0FP48 263 aa16.96■□□□□ 0.31
CCM2-205ENST00000472223 UPK3BL2E5RIL1 263 aa16.96■□□□□ 0.31
CCM2-205ENST00000472223 SUN1O94901 812 aa16.96■□□□□ 0.31
CCM2-205ENST00000472223 AGTP01019 485 aa16.96■□□□□ 0.31
CCM2-205ENST00000472223 ADRB3P13945 408 aa16.96■□□□□ 0.31
CCM2-205ENST00000472223 AVPR2P30518 371 aa16.96■□□□□ 0.31
CCM2-205ENST00000472223 DRG2P55039 364 aaKnown RBP16.96■□□□□ 0.31
CCM2-205ENST00000472223 ARHGEF7Q14155 803 aa16.96■□□□□ 0.31
CCM2-205ENST00000472223 GALNT3Q14435 633 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms