RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 TMEM259Q4ZIN3 620 aa15.43■□□□□ 0.06
SDC3-203ENST00000471567 SETMARQ53H47 684 aaPredicted RBP15.43■□□□□ 0.06
SDC3-203ENST00000471567 TCEAL6Q6IPX3 200 aa15.43■□□□□ 0.06
SDC3-203ENST00000471567 TCEAL3Q969E4 200 aa15.43■□□□□ 0.06
SDC3-203ENST00000471567 ALS2CR12Q96Q35 445 aa15.43■□□□□ 0.06
SDC3-203ENST00000471567 HEMGNQ9BXL5 484 aa15.43■□□□□ 0.06
SDC3-203ENST00000471567 ZDHHC5Q9C0B5 715 aa15.43■□□□□ 0.06
SDC3-203ENST00000471567 NOD2Q9HC29 1040 aa15.43■□□□□ 0.06
SDC3-203ENST00000471567 TM9SF3Q9HD45 589 aa15.43■□□□□ 0.06
SDC3-203ENST00000471567 SAE1Q9UBE0 346 aaPredicted RBP15.43■□□□□ 0.06
SDC3-203ENST00000471567 PACSIN2Q9UNF0 486 aaPredicted RBP15.43■□□□□ 0.06
SDC3-203ENST00000471567 ATP8A1Q9Y2Q0 1164 aa15.43■□□□□ 0.06
SDC3-203ENST00000471567 LNP1A1A4G5 178 aa15.42■□□□□ 0.06
SDC3-203ENST00000471567 HACD1B0YJ81 288 aa15.42■□□□□ 0.06
SDC3-203ENST00000471567 KCNK1O00180 336 aa15.42■□□□□ 0.06
SDC3-203ENST00000471567 NEMP1O14524 444 aa15.42■□□□□ 0.06
SDC3-203ENST00000471567 ARHGAP33O14559 1287 aa15.42■□□□□ 0.06
SDC3-203ENST00000471567 MTSS1O43312 755 aa15.42■□□□□ 0.06
SDC3-203ENST00000471567 GJB3O75712 270 aa15.42■□□□□ 0.06
SDC3-203ENST00000471567 TJP3O95049 919 aa15.42■□□□□ 0.06
SDC3-203ENST00000471567 JCHAINP01591 159 aa15.42■□□□□ 0.06
SDC3-203ENST00000471567 SDHBP21912 280 aa15.42■□□□□ 0.06
SDC3-203ENST00000471567 MAT2AP31153 395 aaKnown RBP15.42■□□□□ 0.06
SDC3-203ENST00000471567 LIMK1P53667 647 aa15.42■□□□□ 0.06
SDC3-203ENST00000471567 ITKQ08881 620 aa15.42■□□□□ 0.06
SDC3-203ENST00000471567 PRKD1Q15139 912 aaPredicted RBP15.42■□□□□ 0.06
SDC3-203ENST00000471567 TMEM52BQ4KMG9 183 aa15.42■□□□□ 0.06
SDC3-203ENST00000471567 CCDC181Q5TID7 509 aa15.42■□□□□ 0.06
SDC3-203ENST00000471567 NAPEPLDQ6IQ20 393 aa15.42■□□□□ 0.06
SDC3-203ENST00000471567 ERAP2Q6P179 960 aa15.42■□□□□ 0.06
SDC3-203ENST00000471567 NETO1Q8TDF5 533 aa15.42■□□□□ 0.06
SDC3-203ENST00000471567 LRRN4Q8WUT4 740 aa15.42■□□□□ 0.06
SDC3-203ENST00000471567 TFB1MQ8WVM0 346 aaKnown RBP15.42■□□□□ 0.06
SDC3-203ENST00000471567 ASB12Q8WXK4 309 aa15.42■□□□□ 0.06
SDC3-203ENST00000471567 SKA1Q96BD8 255 aa15.42■□□□□ 0.06
SDC3-203ENST00000471567 SERAC1Q96JX3 654 aa15.42■□□□□ 0.06
SDC3-203ENST00000471567 NSMCE3Q96MG7 304 aa15.42■□□□□ 0.06
SDC3-203ENST00000471567 SEMA3CQ99985 751 aa15.42■□□□□ 0.06
SDC3-203ENST00000471567 ZFR2Q9UPR6 939 aaKnown RBP15.42■□□□□ 0.06
SDC3-203ENST00000471567 WDR87Q6ZQQ6 2873 aa15.42■□□□□ 0.06
SDC3-203ENST00000471567 TTC24A2A3L6 582 aaPredicted RBP15.41■□□□□ 0.06
SDC3-203ENST00000471567 PRAMEF26H0Y7S4 382 aa15.41■□□□□ 0.06
SDC3-203ENST00000471567 SPINT1O43278 529 aa15.41■□□□□ 0.06
SDC3-203ENST00000471567 HLA-DQB2P05538 268 aa15.41■□□□□ 0.06
SDC3-203ENST00000471567 ENGP17813 658 aa15.41■□□□□ 0.06
SDC3-203ENST00000471567 SLC45A4Q5BKX6 768 aa15.41■□□□□ 0.06
SDC3-203ENST00000471567 MEI1Q5TIA1 1274 aa15.41■□□□□ 0.06
SDC3-203ENST00000471567 ZSWIM9Q86XI8 627 aa15.41■□□□□ 0.06
SDC3-203ENST00000471567 PAF1Q8N7H5 531 aa15.41■□□□□ 0.06
SDC3-203ENST00000471567 CNTD1Q8N815 330 aa15.41■□□□□ 0.06
SDC3-203ENST00000471567 TRIM58Q8NG06 486 aa15.41■□□□□ 0.06
SDC3-203ENST00000471567 ARRDC2Q8TBH0 407 aa15.41■□□□□ 0.06
SDC3-203ENST00000471567 EDEM2Q9BV94 578 aa15.41■□□□□ 0.06
SDC3-203ENST00000471567 C1QTNF2Q9BXJ5 285 aa15.41■□□□□ 0.06
SDC3-203ENST00000471567 SLC17A9Q9BYT1 436 aa15.41■□□□□ 0.06
SDC3-203ENST00000471567 PCDH12Q9NPG4 1184 aa15.41■□□□□ 0.06
SDC3-203ENST00000471567 PCDHGC4Q9Y5F7 938 aa15.41■□□□□ 0.06
SDC3-203ENST00000471567 SLCO1B1Q9Y6L6 691 aa15.41■□□□□ 0.06
SDC3-203ENST00000471567 FRYLO94915 3013 aa15.41■□□□□ 0.06
SDC3-203ENST00000471567 CACNA1EQ15878 2313 aa15.4■□□□□ 0.06
SDC3-203ENST00000471567 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.4■□□□□ 0.06
SDC3-203ENST00000471567 CFAP69A5D8W1 941 aa15.4■□□□□ 0.06
SDC3-203ENST00000471567 RIOK3O14730 519 aaKnown RBP15.4■□□□□ 0.06
SDC3-203ENST00000471567 VILLO15195 856 aa15.4■□□□□ 0.06
SDC3-203ENST00000471567 ZSCAN12O43309 604 aa15.4■□□□□ 0.06
SDC3-203ENST00000471567 GDF9O60383 454 aa15.4■□□□□ 0.06
SDC3-203ENST00000471567 CA4P22748 312 aa15.4■□□□□ 0.06
SDC3-203ENST00000471567 NFKBIAP25963 317 aa15.4■□□□□ 0.06
SDC3-203ENST00000471567 CD38P28907 300 aa15.4■□□□□ 0.06
SDC3-203ENST00000471567 CSNK1EP49674 416 aaKnown RBP15.4■□□□□ 0.06
SDC3-203ENST00000471567 DSC2Q02487 901 aa15.4■□□□□ 0.06
SDC3-203ENST00000471567 OVGP1Q12889 678 aa15.4■□□□□ 0.06
SDC3-203ENST00000471567 TRAF2Q12933 501 aa15.4■□□□□ 0.06
SDC3-203ENST00000471567 ZBTB17Q13105 803 aa15.4■□□□□ 0.06
SDC3-203ENST00000471567 SGCGQ13326 291 aa15.4■□□□□ 0.06
SDC3-203ENST00000471567 NOMO1Q15155 1222 aa15.4■□□□□ 0.06
SDC3-203ENST00000471567 RPS6KA1Q15418 735 aa15.4■□□□□ 0.06
SDC3-203ENST00000471567 TEX44Q53QW1 395 aa15.4■□□□□ 0.06
SDC3-203ENST00000471567 SEL1L3Q68CR1 1132 aa15.4■□□□□ 0.06
SDC3-203ENST00000471567 IL27RAQ6UWB1 636 aa15.4■□□□□ 0.06
SDC3-203ENST00000471567 ZC3H18Q86VM9 953 aaKnown RBP15.4■□□□□ 0.06
SDC3-203ENST00000471567 IQCHQ86VS3 1027 aa15.4■□□□□ 0.06
SDC3-203ENST00000471567 MFSD2AQ8NA29 543 aa15.4■□□□□ 0.06
SDC3-203ENST00000471567 TTC13Q8NBP0 860 aa15.4■□□□□ 0.06
SDC3-203ENST00000471567 FAM174AQ8TBP5 190 aa15.4■□□□□ 0.06
SDC3-203ENST00000471567 CXorf40AQ8TE69 158 aa15.4■□□□□ 0.06
SDC3-203ENST00000471567 HAUS1Q96CS2 278 aa15.4■□□□□ 0.06
SDC3-203ENST00000471567 SLC6A18Q96N87 628 aa15.4■□□□□ 0.06
SDC3-203ENST00000471567 QKIQ96PU8 341 aaKnown RBP eCLIP15.4■□□□□ 0.06
SDC3-203ENST00000471567 LENG8Q96PV6 779 aaPredicted RBP15.4■□□□□ 0.06
SDC3-203ENST00000471567 VAT1Q99536 393 aa15.4■□□□□ 0.06
SDC3-203ENST00000471567 HERPUD2Q9BSE4 406 aa15.4■□□□□ 0.06
SDC3-203ENST00000471567 KCNF1Q9H3M0 494 aa15.4■□□□□ 0.06
SDC3-203ENST00000471567 TMEM9BQ9NQ34 198 aa15.4■□□□□ 0.06
SDC3-203ENST00000471567 AASDHPPTQ9NRN7 309 aa15.4■□□□□ 0.06
SDC3-203ENST00000471567 RXFP3Q9NSD7 469 aa15.4■□□□□ 0.06
SDC3-203ENST00000471567 PHTF1Q9UMS5 762 aa15.4■□□□□ 0.06
SDC3-203ENST00000471567 ITM2BQ9Y287 266 aa15.4■□□□□ 0.06
SDC3-203ENST00000471567 TTLL3Q9Y4R7 772 aa15.4■□□□□ 0.06
SDC3-203ENST00000471567 RAI2Q9Y5P3 530 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms