RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 SULT1E1P49888 294 aa6.95□□□□□ -1.3
HDAC1-204ENST00000471488 DNM1Q05193 864 aaKnown RBP6.95□□□□□ -1.3
HDAC1-204ENST00000471488 DEUP1Q05D60 604 aa6.95□□□□□ -1.3
HDAC1-204ENST00000471488 CETN1Q12798 172 aa6.95□□□□□ -1.3
HDAC1-204ENST00000471488 PDCLQ13371 301 aa6.95□□□□□ -1.3
HDAC1-204ENST00000471488 CUL4AQ13619 759 aa6.95□□□□□ -1.3
HDAC1-204ENST00000471488 NFATC4Q14934 902 aa6.95□□□□□ -1.3
HDAC1-204ENST00000471488 EFHC1Q5JVL4 640 aa6.95□□□□□ -1.3
HDAC1-204ENST00000471488 CERCAMQ5T4B2 595 aa6.95□□□□□ -1.3
HDAC1-204ENST00000471488 DCAF12Q5T6F0 453 aa6.95□□□□□ -1.3
HDAC1-204ENST00000471488 ANKS6Q68DC2 871 aa6.95□□□□□ -1.3
HDAC1-204ENST00000471488 KCTD16Q68DU8 428 aa6.95□□□□□ -1.3
HDAC1-204ENST00000471488 SPECC1LQ69YQ0 1117 aa6.95□□□□□ -1.3
HDAC1-204ENST00000471488 RWDD4Q6NW29 188 aaKnown RBP6.95□□□□□ -1.3
HDAC1-204ENST00000471488 LVRNQ6Q4G3 990 aa6.95□□□□□ -1.3
HDAC1-204ENST00000471488 GDPD4Q6W3E5 623 aa6.95□□□□□ -1.3
HDAC1-204ENST00000471488 FAM183BPQ6ZVS7 135 aa6.95□□□□□ -1.3
HDAC1-204ENST00000471488 SETD3Q86TU7 594 aaPredicted RBP6.95□□□□□ -1.3
HDAC1-204ENST00000471488 SLITRK4Q8IW52 837 aa6.95□□□□□ -1.3
HDAC1-204ENST00000471488 ARHGEF19Q8IW93 802 aa6.95□□□□□ -1.3
HDAC1-204ENST00000471488 GUF1Q8N442 669 aaKnown RBP6.95□□□□□ -1.3
HDAC1-204ENST00000471488 TP53I13Q8NBR0 393 aaPredicted RBP6.95□□□□□ -1.3
HDAC1-204ENST00000471488 AGBL5Q8NDL9 886 aa6.95□□□□□ -1.3
HDAC1-204ENST00000471488 CCL4L1Q8NHW4 92 aa6.95□□□□□ -1.3
HDAC1-204ENST00000471488 PRR7Q8TB68 274 aa6.95□□□□□ -1.3
HDAC1-204ENST00000471488 TMEM174Q8WUU8 243 aa6.95□□□□□ -1.3
HDAC1-204ENST00000471488 STARD8Q92502 1023 aa6.95□□□□□ -1.3
HDAC1-204ENST00000471488 RAB7BQ96AH8 199 aa6.95□□□□□ -1.3
HDAC1-204ENST00000471488 AHCYL2Q96HN2 611 aaKnown RBP6.95□□□□□ -1.3
HDAC1-204ENST00000471488 WDR92Q96MX6 357 aa6.95□□□□□ -1.3
HDAC1-204ENST00000471488 APOOQ9BUR5 198 aa6.95□□□□□ -1.3
HDAC1-204ENST00000471488 TMEM168Q9H0V1 697 aa6.95□□□□□ -1.3
HDAC1-204ENST00000471488 CYP4F12Q9HCS2 524 aa6.95□□□□□ -1.3
HDAC1-204ENST00000471488 ACP6Q9NPH0 428 aa6.95□□□□□ -1.3
HDAC1-204ENST00000471488 PRDM8Q9NQV8 689 aa6.95□□□□□ -1.3
HDAC1-204ENST00000471488 IGSF5Q9NSI5 407 aa6.95□□□□□ -1.3
HDAC1-204ENST00000471488 ARMCX3Q9UH62 379 aaPredicted RBP6.95□□□□□ -1.3
HDAC1-204ENST00000471488 HPCAL4Q9UM19 191 aa6.95□□□□□ -1.3
HDAC1-204ENST00000471488 MRPS18BQ9Y676 258 aaKnown RBP6.95□□□□□ -1.3
HDAC1-204ENST00000471488 TRBV23OR9-2A0A075B6M9 112 aa6.94□□□□□ -1.3
HDAC1-204ENST00000471488 IGHV5-10-1A0A0J9YXX1 117 aa6.94□□□□□ -1.3
HDAC1-204ENST00000471488 LOC101059948A0A1B0GTJ6 334 aa6.94□□□□□ -1.3
HDAC1-204ENST00000471488 GOLGA6CA6NDK9 693 aa6.94□□□□□ -1.3
HDAC1-204ENST00000471488 GOLGA6BA6NDN3 693 aa6.94□□□□□ -1.3
HDAC1-204ENST00000471488 TMEM110-MUSTN1A8MSY1 372 aa6.94□□□□□ -1.3
HDAC1-204ENST00000471488 K7EM74 188 aa6.94□□□□□ -1.3
HDAC1-204ENST00000471488 CACNB4O00305 520 aaPredicted RBP6.94□□□□□ -1.3
HDAC1-204ENST00000471488 ZW10O43264 779 aa6.94□□□□□ -1.3
HDAC1-204ENST00000471488 HSF2BPO75031 334 aa6.94□□□□□ -1.3
HDAC1-204ENST00000471488 ZNF821O75541 412 aaPredicted RBP6.94□□□□□ -1.3
HDAC1-204ENST00000471488 RHOBTB3O94955 611 aa6.94□□□□□ -1.3
HDAC1-204ENST00000471488 IGLV3-25P01717 112 aa6.94□□□□□ -1.3
HDAC1-204ENST00000471488 GOLGA6DP0CG33 693 aa6.94□□□□□ -1.3
HDAC1-204ENST00000471488 RNF224P0DH78 156 aa6.94□□□□□ -1.3
HDAC1-204ENST00000471488 TNFRSF8P28908 595 aa6.94□□□□□ -1.3
HDAC1-204ENST00000471488 GNA15P30679 374 aa6.94□□□□□ -1.3
HDAC1-204ENST00000471488 ACVRL1P37023 503 aa6.94□□□□□ -1.3
HDAC1-204ENST00000471488 DCTP40126 519 aa6.94□□□□□ -1.3
HDAC1-204ENST00000471488 SYKP43405 635 aa6.94□□□□□ -1.3
HDAC1-204ENST00000471488 MAPK9P45984 424 aa6.94□□□□□ -1.3
HDAC1-204ENST00000471488 FMO5P49326 533 aa6.94□□□□□ -1.3
HDAC1-204ENST00000471488 SNRPD1P62314 119 aaKnown RBP6.94□□□□□ -1.3
HDAC1-204ENST00000471488 ARF5P84085 180 aa6.94□□□□□ -1.3
HDAC1-204ENST00000471488 GNA12Q03113 381 aa6.94□□□□□ -1.3
HDAC1-204ENST00000471488 RAD51Q06609 339 aa6.94□□□□□ -1.3
HDAC1-204ENST00000471488 ENPEPQ07075 957 aa6.94□□□□□ -1.3
HDAC1-204ENST00000471488 ERV3-1Q14264 604 aa6.94□□□□□ -1.3
HDAC1-204ENST00000471488 NAA30Q147X3 362 aaPredicted RBP6.94□□□□□ -1.3
HDAC1-204ENST00000471488 NFIL3Q16649 462 aa6.94□□□□□ -1.3
HDAC1-204ENST00000471488 EIF2S3LQ2VIR3 472 aaKnown RBP6.94□□□□□ -1.3
HDAC1-204ENST00000471488 EDRF1Q3B7T1 1238 aa6.94□□□□□ -1.3
HDAC1-204ENST00000471488 ANKRD40Q6AI12 368 aa6.94□□□□□ -1.3
HDAC1-204ENST00000471488 ZSCAN30Q86W11 494 aa6.94□□□□□ -1.3
HDAC1-204ENST00000471488 IRF2BP1Q8IU81 584 aa6.94□□□□□ -1.3
HDAC1-204ENST00000471488 CREBRFQ8IUR6 639 aa6.94□□□□□ -1.3
HDAC1-204ENST00000471488 NLGN4XQ8N0W4 816 aa6.94□□□□□ -1.3
HDAC1-204ENST00000471488 UBR7Q8N806 425 aa6.94□□□□□ -1.3
HDAC1-204ENST00000471488 GPR156Q8NFN8 814 aa6.94□□□□□ -1.3
HDAC1-204ENST00000471488 NLGN4YQ8NFZ3 816 aaPredicted RBP6.94□□□□□ -1.3
HDAC1-204ENST00000471488 KIAA1524Q8TCG1 905 aa6.94□□□□□ -1.3
HDAC1-204ENST00000471488 CPT1CQ8TCG5 803 aa6.94□□□□□ -1.3
HDAC1-204ENST00000471488 ZDHHC1Q8WTX9 485 aa6.94□□□□□ -1.3
HDAC1-204ENST00000471488 PDCD6IPQ8WUM4 868 aaKnown RBP6.94□□□□□ -1.3
HDAC1-204ENST00000471488 OR1E3Q8WZA6 343 aa6.94□□□□□ -1.3
HDAC1-204ENST00000471488 TBATAQ96M53 351 aa6.94□□□□□ -1.3
HDAC1-204ENST00000471488 SLC4A5Q9BY07 1137 aa6.94□□□□□ -1.3
HDAC1-204ENST00000471488 ASPSCR1Q9BZE9 553 aa6.94□□□□□ -1.3
HDAC1-204ENST00000471488 CEP44Q9C0F1 390 aa6.94□□□□□ -1.3
HDAC1-204ENST00000471488 PIGVQ9NUD9 493 aa6.94□□□□□ -1.3
HDAC1-204ENST00000471488 OCIAD1Q9NX40 245 aa6.94□□□□□ -1.3
HDAC1-204ENST00000471488 GOLGA6AQ9NYA3 693 aa6.94□□□□□ -1.3
HDAC1-204ENST00000471488 LUZP4Q9P127 313 aa6.94□□□□□ -1.3
HDAC1-204ENST00000471488 KLHL3Q9UH77 587 aa6.94□□□□□ -1.3
HDAC1-204ENST00000471488 DNAI1Q9UI46 699 aa6.94□□□□□ -1.3
HDAC1-204ENST00000471488 APPL1Q9UKG1 709 aa6.94□□□□□ -1.3
HDAC1-204ENST00000471488 PCDHB3Q9Y5E6 796 aa6.94□□□□□ -1.3
HDAC1-204ENST00000471488 SCN8AQ9UQD0 1980 aa6.94□□□□□ -1.3
HDAC1-204ENST00000471488 ICE1Q9Y2F5 2266 aa6.94□□□□□ -1.3
HDAC1-204ENST00000471488 SDK2Q58EX2 2172 aa6.93□□□□□ -1.3
HDAC1-204ENST00000471488 UNC13CQ8NB66 2214 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms