RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 RXFP2Q8WXD0 754 aa9.22□□□□□ -0.93
SF3A1-206ENST00000471037 KLK6Q92876 244 aa9.22□□□□□ -0.93
SF3A1-206ENST00000471037 PPP1R16AQ96I34 528 aa9.22□□□□□ -0.93
SF3A1-206ENST00000471037 BTBD6Q96KE9 485 aa9.22□□□□□ -0.93
SF3A1-206ENST00000471037 TRIM7Q9C029 511 aa9.22□□□□□ -0.93
SF3A1-206ENST00000471037 POLR1BQ9H9Y6 1135 aa9.22□□□□□ -0.93
SF3A1-206ENST00000471037 ASCL3Q9NQ33 180 aa9.22□□□□□ -0.93
SF3A1-206ENST00000471037 DYRK4Q9NR20 520 aa9.22□□□□□ -0.93
SF3A1-206ENST00000471037 EVA1BQ9NVM1 165 aa9.22□□□□□ -0.93
SF3A1-206ENST00000471037 ARHGEF38Q9NXL2 777 aa9.22□□□□□ -0.93
SF3A1-206ENST00000471037 AMFRQ9UKV5 643 aa9.22□□□□□ -0.93
SF3A1-206ENST00000471037 SSUH2Q9Y2M2 353 aa9.22□□□□□ -0.93
SF3A1-206ENST00000471037 JRKLQ9Y4A0 524 aa9.22□□□□□ -0.93
SF3A1-206ENST00000471037 HS3ST3A1Q9Y663 406 aa9.22□□□□□ -0.93
SF3A1-206ENST00000471037 DOCK9Q9BZ29 2069 aa9.21□□□□□ -0.93
SF3A1-206ENST00000471037 IGLV3-10A0A075B6K4 115 aa9.21□□□□□ -0.94
SF3A1-206ENST00000471037 SPTY2D1-AS1A0A0U1RR47 76 aa9.21□□□□□ -0.94
SF3A1-206ENST00000471037 CTAGE9A4FU28 777 aa9.21□□□□□ -0.94
SF3A1-206ENST00000471037 DRGXA6NNA5 263 aa9.21□□□□□ -0.94
SF3A1-206ENST00000471037 TMEM110-MUSTN1A8MSY1 372 aa9.21□□□□□ -0.94
SF3A1-206ENST00000471037 MIF4GDA9UHW6 222 aaKnown RBP9.21□□□□□ -0.94
SF3A1-206ENST00000471037 I6L893 689 aaPredicted RBP9.21□□□□□ -0.94
SF3A1-206ENST00000471037 K7ERQ8 282 aa9.21□□□□□ -0.94
SF3A1-206ENST00000471037 K7ESM1 405 aa9.21□□□□□ -0.94
SF3A1-206ENST00000471037 M0QYT0 321 aa9.21□□□□□ -0.94
SF3A1-206ENST00000471037 RNF103O00237 685 aa9.21□□□□□ -0.94
SF3A1-206ENST00000471037 SPOPO43791 374 aa9.21□□□□□ -0.94
SF3A1-206ENST00000471037 CSO75390 466 aaKnown RBP9.21□□□□□ -0.94
SF3A1-206ENST00000471037 ZNF821O75541 412 aaPredicted RBP9.21□□□□□ -0.94
SF3A1-206ENST00000471037 PCDH8O95206 1070 aa9.21□□□□□ -0.94
SF3A1-206ENST00000471037 CSF2P04141 144 aa9.21□□□□□ -0.94
SF3A1-206ENST00000471037 NME1P15531 152 aaKnown RBP9.21□□□□□ -0.94
SF3A1-206ENST00000471037 COMTP21964 271 aa9.21□□□□□ -0.94
SF3A1-206ENST00000471037 CASQ1P31415 396 aa9.21□□□□□ -0.94
SF3A1-206ENST00000471037 PCK1P35558 622 aa9.21□□□□□ -0.94
SF3A1-206ENST00000471037 CXCR3P49682 368 aa9.21□□□□□ -0.94
SF3A1-206ENST00000471037 NEK3P51956 506 aa9.21□□□□□ -0.94
SF3A1-206ENST00000471037 CLDN2P57739 230 aa9.21□□□□□ -0.94
SF3A1-206ENST00000471037 CCDC14Q49A88 953 aa9.21□□□□□ -0.94
SF3A1-206ENST00000471037 BRMS1LQ5PSV4 323 aa9.21□□□□□ -0.94
SF3A1-206ENST00000471037 BROXQ5VW32 411 aa9.21□□□□□ -0.94
SF3A1-206ENST00000471037 SEL1L3Q68CR1 1132 aa9.21□□□□□ -0.94
SF3A1-206ENST00000471037 KIAA1161Q6NSJ0 714 aa9.21□□□□□ -0.94
SF3A1-206ENST00000471037 TRNP1Q6NT89 227 aa9.21□□□□□ -0.94
SF3A1-206ENST00000471037 ZCCHC8Q6NZY4 707 aaKnown RBP9.21□□□□□ -0.94
SF3A1-206ENST00000471037 Q6ZSR6 202 aa9.21□□□□□ -0.94
SF3A1-206ENST00000471037 STRADAQ7RTN6 431 aa9.21□□□□□ -0.94
SF3A1-206ENST00000471037 PEX26Q7Z412 305 aa9.21□□□□□ -0.94
SF3A1-206ENST00000471037 NT5DC3Q86UY8 548 aa9.21□□□□□ -0.94
SF3A1-206ENST00000471037 PARGQ86W56 976 aa9.21□□□□□ -0.94
SF3A1-206ENST00000471037 CHST14Q8NCH0 376 aa9.21□□□□□ -0.94
SF3A1-206ENST00000471037 ZNF548Q8NEK5 533 aaPredicted RBP9.21□□□□□ -0.94
SF3A1-206ENST00000471037 GRIN3AQ8TCU5 1115 aa9.21□□□□□ -0.94
SF3A1-206ENST00000471037 KCNE4Q8WWG9 221 aa9.21□□□□□ -0.94
SF3A1-206ENST00000471037 CENPIQ92674 756 aaPredicted RBP9.21□□□□□ -0.94
SF3A1-206ENST00000471037 NT5C3BQ969T7 300 aa9.21□□□□□ -0.94
SF3A1-206ENST00000471037 COL26A1Q96A83 441 aa9.21□□□□□ -0.94
SF3A1-206ENST00000471037 GRAMD1AQ96CP6 724 aa9.21□□□□□ -0.94
SF3A1-206ENST00000471037 PGAP3Q96FM1 320 aaPredicted RBP9.21□□□□□ -0.94
SF3A1-206ENST00000471037 BMFQ96LC9 184 aa9.21□□□□□ -0.94
SF3A1-206ENST00000471037 C1orf74Q96LT6 269 aa9.21□□□□□ -0.94
SF3A1-206ENST00000471037 WDR24Q96S15 920 aa9.21□□□□□ -0.94
SF3A1-206ENST00000471037 NPY6RQ99463 290 aa9.21□□□□□ -0.94
SF3A1-206ENST00000471037 NAPGQ99747 312 aaPredicted RBP9.21□□□□□ -0.94
SF3A1-206ENST00000471037 DPH1Q9BZG8 443 aa9.21□□□□□ -0.94
SF3A1-206ENST00000471037 CEP44Q9C0F1 390 aa9.21□□□□□ -0.94
SF3A1-206ENST00000471037 SIK2Q9H0K1 926 aa9.21□□□□□ -0.94
SF3A1-206ENST00000471037 ANLNQ9NQW6 1124 aa9.21□□□□□ -0.94
SF3A1-206ENST00000471037 THSD1Q9NS62 852 aa9.21□□□□□ -0.94
SF3A1-206ENST00000471037 PIGVQ9NUD9 493 aa9.21□□□□□ -0.94
SF3A1-206ENST00000471037 DNAJC28Q9NX36 388 aa9.21□□□□□ -0.94
SF3A1-206ENST00000471037 NCKIPSDQ9NZQ3 722 aa9.21□□□□□ -0.94
SF3A1-206ENST00000471037 IL36AQ9UHA7 158 aa9.21□□□□□ -0.94
SF3A1-206ENST00000471037 DNAI1Q9UI46 699 aa9.21□□□□□ -0.94
SF3A1-206ENST00000471037 ALG6Q9Y672 507 aa9.21□□□□□ -0.94
SF3A1-206ENST00000471037 CSNK1G3Q9Y6M4 447 aa9.21□□□□□ -0.94
SF3A1-206ENST00000471037 WASF2Q9Y6W5 498 aa9.21□□□□□ -0.94
SF3A1-206ENST00000471037 COL27A1Q8IZC6 1860 aaPredicted RBP9.21□□□□□ -0.94
SF3A1-206ENST00000471037 A0A0D9SEW6 157 aa9.2□□□□□ -0.94
SF3A1-206ENST00000471037 CXorf51AA0A1B0GTR3 108 aa9.2□□□□□ -0.94
SF3A1-206ENST00000471037 H3BM21 787 aa9.2□□□□□ -0.94
SF3A1-206ENST00000471037 PSTPIP1O43586 416 aa9.2□□□□□ -0.94
SF3A1-206ENST00000471037 AP1G1O43747 822 aa9.2□□□□□ -0.94
SF3A1-206ENST00000471037 LEFTY1O75610 366 aa9.2□□□□□ -0.94
SF3A1-206ENST00000471037 NEBLO76041 1014 aa9.2□□□□□ -0.94
SF3A1-206ENST00000471037 ENDOD1O94919 500 aa9.2□□□□□ -0.94
SF3A1-206ENST00000471037 FTCDO95954 541 aa9.2□□□□□ -0.94
SF3A1-206ENST00000471037 F9P00740 461 aa9.2□□□□□ -0.94
SF3A1-206ENST00000471037 ADRB3P13945 408 aa9.2□□□□□ -0.94
SF3A1-206ENST00000471037 ITGB7P26010 798 aa9.2□□□□□ -0.94
SF3A1-206ENST00000471037 CTNNA2P26232 953 aa9.2□□□□□ -0.94
SF3A1-206ENST00000471037 RECQLP46063 649 aaPredicted RBP9.2□□□□□ -0.94
SF3A1-206ENST00000471037 RABIFP47224 123 aa9.2□□□□□ -0.94
SF3A1-206ENST00000471037 SULT1E1P49888 294 aa9.2□□□□□ -0.94
SF3A1-206ENST00000471037 RPS21P63220 83 aaKnown RBP9.2□□□□□ -0.94
SF3A1-206ENST00000471037 SKOR1P84550 965 aa9.2□□□□□ -0.94
SF3A1-206ENST00000471037 FZD2Q14332 565 aa9.2□□□□□ -0.94
SF3A1-206ENST00000471037 RPS6KA1Q15418 735 aa9.2□□□□□ -0.94
SF3A1-206ENST00000471037 HADHQ16836 314 aaKnown RBP9.2□□□□□ -0.94
SF3A1-206ENST00000471037 ISXQ2M1V0 245 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms