RNA–Protein interactions for RNA: ENST00000469479.1

VPS8-219, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-219ENST00000469479 SRSF1Q07955 248 aaKnown RBP eCLIP5.05□□□□□ -1.6
VPS8-219ENST00000469479 BFSP1Q12934 665 aa5.05□□□□□ -1.6
VPS8-219ENST00000469479 NOMO1Q15155 1222 aa5.05□□□□□ -1.6
VPS8-219ENST00000469479 UPP1Q16831 310 aa5.05□□□□□ -1.6
VPS8-219ENST00000469479 DCAF4L1Q3SXM0 396 aa5.05□□□□□ -1.6
VPS8-219ENST00000469479 Q4G0T1 1027 aa5.05□□□□□ -1.6
VPS8-219ENST00000469479 CTXN3Q4LDR2 81 aa5.05□□□□□ -1.6
VPS8-219ENST00000469479 SYCP2LQ5T4T6 812 aa5.05□□□□□ -1.6
VPS8-219ENST00000469479 JAKMIP3Q5VZ66 844 aa5.05□□□□□ -1.6
VPS8-219ENST00000469479 AWAT2Q6E213 333 aa5.05□□□□□ -1.6
VPS8-219ENST00000469479 MOXD1Q6UVY6 613 aa5.05□□□□□ -1.6
VPS8-219ENST00000469479 B3GNT9Q6UX72 402 aa5.05□□□□□ -1.6
VPS8-219ENST00000469479 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.05□□□□□ -1.6
VPS8-219ENST00000469479 ZNF782Q6ZMW2 699 aaPredicted RBP5.05□□□□□ -1.6
VPS8-219ENST00000469479 FKBP9P1Q75LS8 142 aa5.05□□□□□ -1.6
VPS8-219ENST00000469479 CLNKQ7Z7G1 428 aa5.05□□□□□ -1.6
VPS8-219ENST00000469479 C4orf19Q8IY42 314 aa5.05□□□□□ -1.6
VPS8-219ENST00000469479 AHI1Q8N157 1196 aa5.05□□□□□ -1.6
VPS8-219ENST00000469479 TOR1AIP2Q8NFQ8 470 aa5.05□□□□□ -1.6
VPS8-219ENST00000469479 CCDC148Q8NFR7 591 aa5.05□□□□□ -1.6
VPS8-219ENST00000469479 BEST2Q8NFU1 509 aa5.05□□□□□ -1.6
VPS8-219ENST00000469479 UBXN4Q92575 508 aa5.05□□□□□ -1.6
VPS8-219ENST00000469479 CD101Q93033 1021 aa5.05□□□□□ -1.6
VPS8-219ENST00000469479 ATP2A3Q93084 1043 aa5.05□□□□□ -1.6
VPS8-219ENST00000469479 FATE1Q969F0 183 aa5.05□□□□□ -1.6
VPS8-219ENST00000469479 PSMG2Q969U7 264 aa5.05□□□□□ -1.6
VPS8-219ENST00000469479 TMEM143Q96AN5 459 aa5.05□□□□□ -1.6
VPS8-219ENST00000469479 RSPRY1Q96DX4 576 aa5.05□□□□□ -1.6
VPS8-219ENST00000469479 CPB2Q96IY4 423 aa5.05□□□□□ -1.6
VPS8-219ENST00000469479 CCDC43Q96MW1 224 aaKnown RBP5.05□□□□□ -1.6
VPS8-219ENST00000469479 PAAF1Q9BRP4 392 aa5.05□□□□□ -1.6
VPS8-219ENST00000469479 C2orf40Q9H1Z8 148 aa5.05□□□□□ -1.6
VPS8-219ENST00000469479 TASP1Q9H6P5 420 aa5.05□□□□□ -1.6
VPS8-219ENST00000469479 GKN1Q9NS71 199 aa5.05□□□□□ -1.6
VPS8-219ENST00000469479 FBXL5Q9UKA1 691 aa5.05□□□□□ -1.6
VPS8-219ENST00000469479 MMP17Q9ULZ9 603 aa5.05□□□□□ -1.6
VPS8-219ENST00000469479 TBX20Q9UMR3 447 aa5.05□□□□□ -1.6
VPS8-219ENST00000469479 NEU2Q9Y3R4 380 aa5.05□□□□□ -1.6
VPS8-219ENST00000469479 YIPF1Q9Y548 306 aa5.05□□□□□ -1.6
VPS8-219ENST00000469479 ASCC3Q8N3C0 2202 aaKnown RBP5.05□□□□□ -1.6
VPS8-219ENST00000469479 CELSR3Q9NYQ7 3312 aa5.05□□□□□ -1.6
VPS8-219ENST00000469479 COL12A1Q99715 3063 aa5.05□□□□□ -1.6
VPS8-219ENST00000469479 NOTCH4Q99466 2003 aa5.04□□□□□ -1.6
VPS8-219ENST00000469479 PRAMEF33A0A0G2JMD5 474 aa5.04□□□□□ -1.6
VPS8-219ENST00000469479 OR6C75A6NL08 312 aa5.04□□□□□ -1.6
VPS8-219ENST00000469479 ENO4A6NNW6 628 aa5.04□□□□□ -1.6
VPS8-219ENST00000469479 FLRT2O43155 660 aa5.04□□□□□ -1.6
VPS8-219ENST00000469479 SH3BP5O60239 455 aa5.04□□□□□ -1.6
VPS8-219ENST00000469479 PRAMEF10O60809 474 aa5.04□□□□□ -1.6
VPS8-219ENST00000469479 SEC24AO95486 1093 aa5.04□□□□□ -1.6
VPS8-219ENST00000469479 CER1O95813 267 aa5.04□□□□□ -1.6
VPS8-219ENST00000469479 EGFP01133 1207 aa5.04□□□□□ -1.6
VPS8-219ENST00000469479 BCKDHBP21953 392 aa5.04□□□□□ -1.6
VPS8-219ENST00000469479 PAX3P23760 479 aa5.04□□□□□ -1.6
VPS8-219ENST00000469479 YWHABP31946 246 aaKnown RBP5.04□□□□□ -1.6
VPS8-219ENST00000469479 HNF1BP35680 557 aa5.04□□□□□ -1.6
VPS8-219ENST00000469479 ARPP19P56211 112 aa5.04□□□□□ -1.6
VPS8-219ENST00000469479 FAM193AP78312 1265 aa5.04□□□□□ -1.6
VPS8-219ENST00000469479 RAPGEF1Q13905 1077 aa5.04□□□□□ -1.6
VPS8-219ENST00000469479 NAB2Q15742 525 aa5.04□□□□□ -1.6
VPS8-219ENST00000469479 PFKFB3Q16875 520 aaPredicted RBP5.04□□□□□ -1.6
VPS8-219ENST00000469479 FAM187BQ17R55 369 aa5.04□□□□□ -1.6
VPS8-219ENST00000469479 INAVAQ3KP66 663 aa5.04□□□□□ -1.6
VPS8-219ENST00000469479 PREPLQ4J6C6 727 aaPredicted RBP5.04□□□□□ -1.6
VPS8-219ENST00000469479 TAF1BQ53T94 588 aaPredicted RBP5.04□□□□□ -1.6
VPS8-219ENST00000469479 PLA2G4FQ68DD2 849 aa5.04□□□□□ -1.6
VPS8-219ENST00000469479 ANO7Q6IWH7 933 aa5.04□□□□□ -1.6
VPS8-219ENST00000469479 IL27RAQ6UWB1 636 aa5.04□□□□□ -1.6
VPS8-219ENST00000469479 TRMT11Q7Z4G4 463 aaKnown RBP5.04□□□□□ -1.6
VPS8-219ENST00000469479 MICU3Q86XE3 530 aa5.04□□□□□ -1.6
VPS8-219ENST00000469479 TMC8Q8IU68 726 aa5.04□□□□□ -1.6
VPS8-219ENST00000469479 ZBTB8OSQ8IWT0 167 aa5.04□□□□□ -1.6
VPS8-219ENST00000469479 FAM177A1Q8N128 213 aaPredicted RBP5.04□□□□□ -1.6
VPS8-219ENST00000469479 PPM1KQ8N3J5 372 aa5.04□□□□□ -1.6
VPS8-219ENST00000469479 SLC30A5Q8TAD4 765 aa5.04□□□□□ -1.6
VPS8-219ENST00000469479 TTC8Q8TAM2 541 aa5.04□□□□□ -1.6
VPS8-219ENST00000469479 ZFYVE19Q96K21 471 aa5.04□□□□□ -1.6
VPS8-219ENST00000469479 FAM20AQ96MK3 541 aa5.04□□□□□ -1.6
VPS8-219ENST00000469479 ACAP3Q96P50 834 aa5.04□□□□□ -1.6
VPS8-219ENST00000469479 TPSD1Q9BZJ3 242 aa5.04□□□□□ -1.6
VPS8-219ENST00000469479 GSTO2Q9H4Y5 243 aa5.04□□□□□ -1.6
VPS8-219ENST00000469479 ZSWIM4Q9H7M6 989 aa5.04□□□□□ -1.6
VPS8-219ENST00000469479 ANLNQ9NQW6 1124 aa5.04□□□□□ -1.6
VPS8-219ENST00000469479 BCCIPQ9P287 314 aaKnown RBP eCLIP5.04□□□□□ -1.6
VPS8-219ENST00000469479 NFE2L3Q9Y4A8 694 aa5.04□□□□□ -1.6
VPS8-219ENST00000469479 PCDHGB2Q9Y5G2 931 aa5.04□□□□□ -1.6
VPS8-219ENST00000469479 TDRD15B5MCY1 1934 aaKnown RBP5.03□□□□□ -1.6
VPS8-219ENST00000469479 COL6A6A6NMZ7 2263 aa5.03□□□□□ -1.6
VPS8-219ENST00000469479 PHLPP2Q6ZVD8 1323 aa5.03□□□□□ -1.6
VPS8-219ENST00000469479 MGAQ8IWI9 3026 aa5.03□□□□□ -1.6
VPS8-219ENST00000469479 CYP3A7-CYP3A51PA0A087WV96 503 aa5.03□□□□□ -1.6
VPS8-219ENST00000469479 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.03□□□□□ -1.6
VPS8-219ENST00000469479 TMEM150BA6NC51 233 aa5.03□□□□□ -1.6
VPS8-219ENST00000469479 PPEF2O14830 753 aa5.03□□□□□ -1.6
VPS8-219ENST00000469479 TBX3O15119 743 aa5.03□□□□□ -1.6
VPS8-219ENST00000469479 ZBTB43O43298 467 aa5.03□□□□□ -1.6
VPS8-219ENST00000469479 CBFA2T3O75081 653 aa5.03□□□□□ -1.6
VPS8-219ENST00000469479 ZNF217O75362 1048 aa5.03□□□□□ -1.6
VPS8-219ENST00000469479 GJB3O75712 270 aa5.03□□□□□ -1.6
VPS8-219ENST00000469479 PRAMEF12O95522 483 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms