RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 PAPLNO95428 1278 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 JUNP05412 331 aaKnown RBP4.9□□□□□ -1.63
SF3B1-207ENST00000468925 PGK2P07205 417 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 INHBAP08476 426 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 SNRPAP09012 282 aaKnown RBP4.9□□□□□ -1.63
SF3B1-207ENST00000468925 GSTM1P09488 218 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 CD8BP10966 210 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 MBL2P11226 248 aaPredicted RBP4.9□□□□□ -1.63
SF3B1-207ENST00000468925 CDH1P12830 882 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 KRT10P13645 584 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 IL10P22301 178 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 F8A1P23610 371 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 KLRC2P26717 231 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 GCAP28676 217 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 CCND2P30279 289 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 SLC7A1P30825 629 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 HOXC9P31274 260 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 PTPN7P35236 360 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 PSMC2P35998 433 aaKnown RBP4.9□□□□□ -1.63
SF3B1-207ENST00000468925 HPCAL1P37235 193 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 TALDO1P37837 337 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 DDOSTP39656 456 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 IL6STP40189 918 aaPredicted RBP4.9□□□□□ -1.63
SF3B1-207ENST00000468925 GP5P40197 560 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 OR3A3P47888 321 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 CLK3P49761 638 aaKnown RBP4.9□□□□□ -1.63
SF3B1-207ENST00000468925 NDST2P52849 883 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 AQP5P55064 265 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 GABARAPL2P60520 117 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 TIMM10P62072 90 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 MRPS15P82914 257 aaKnown RBP4.9□□□□□ -1.63
SF3B1-207ENST00000468925 ARHGAP8P85298 464 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 PURAQ00577 322 aaKnown RBP4.9□□□□□ -1.63
SF3B1-207ENST00000468925 ZNF45Q02386 682 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 PPARDQ03181 441 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 TROAPQ12815 778 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 TRAF2Q12933 501 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 PDIA2Q13087 525 aaKnown RBP4.9□□□□□ -1.63
SF3B1-207ENST00000468925 ANGPT1Q15389 498 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 CRY1Q16526 586 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 BMT2Q1RMZ1 405 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 SMU1Q2TAY7 513 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 BBS9Q3SYG4 887 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 TMEM119Q4V9L6 283 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 ALFQ53S48 1182 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 AARS2Q5JTZ9 985 aaKnown RBP4.9□□□□□ -1.63
SF3B1-207ENST00000468925 CCNYL2Q5T2Q4 361 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 ZNF648Q5T619 568 aaPredicted RBP4.9□□□□□ -1.63
SF3B1-207ENST00000468925 FAM102BQ5T8I3 360 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 RNASEH2BQ5TBB1 312 aaKnown RBP4.9□□□□□ -1.63
SF3B1-207ENST00000468925 ANGEL2Q5VTE6 544 aaKnown RBP4.9□□□□□ -1.63
SF3B1-207ENST00000468925 RSBN1Q5VWQ0 802 aaPredicted RBP4.9□□□□□ -1.63
SF3B1-207ENST00000468925 DPY19L2P1Q6NXN4 242 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 ZCCHC8Q6NZY4 707 aaKnown RBP4.9□□□□□ -1.63
SF3B1-207ENST00000468925 NEK5Q6P3R8 708 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 GALNT18Q6P9A2 607 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 ZNF773Q6PK81 442 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 NXPE4Q6UWF7 544 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 RNF111Q6ZNA4 994 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 TOM1L2Q6ZVM7 507 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 BEND5Q7L4P6 421 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 PRSS48Q7RTY5 328 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 HPS6Q86YV9 775 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 PLCZ1Q86YW0 608 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 WFDC3Q8IUB2 231 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 LIX1LQ8IVB5 337 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 NUDCD3Q8IVD9 361 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 HERC6Q8IVU3 1022 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 ARID3BQ8IVW6 561 aaPredicted RBP4.9□□□□□ -1.63
SF3B1-207ENST00000468925 ARHGEF19Q8IW93 802 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 SULF2Q8IWU5 870 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 UNC5BQ8IZJ1 945 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 DEFB107AQ8IZN7 70 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 PDIK1LQ8N165 341 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 C4orf33Q8N1A6 199 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 FIBCD1Q8N539 461 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 TOP6BLQ8N6T0 577 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 MAGEB6Q8N7X4 407 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 CNTD1Q8N815 330 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 SHCBP1Q8NEM2 672 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 PHF10Q8WUB8 498 aaKnown RBP4.9□□□□□ -1.63
SF3B1-207ENST00000468925 TMEM174Q8WUU8 243 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 SEPT8Q92599 483 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 TTC17Q96AE7 1141 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 ZUFSPQ96AP4 578 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 ASB9Q96DX5 294 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 CDCA5Q96FF9 252 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 FEM1CQ96JP0 617 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 RHOVQ96L33 236 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 ZNF560Q96MR9 790 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 ZNF717Q9BY31 904 aaPredicted RBP4.9□□□□□ -1.63
SF3B1-207ENST00000468925 BCO2Q9BYV7 579 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 B3GNT4Q9C0J1 378 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 C6orf62Q9GZU0 229 aaPredicted RBP4.9□□□□□ -1.63
SF3B1-207ENST00000468925 UPF3AQ9H1J1 476 aaKnown RBP4.9□□□□□ -1.63
SF3B1-207ENST00000468925 SLC6A15Q9H2J7 730 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 KCTD10Q9H3F6 313 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 MUC13Q9H3R2 512 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 ARMC7Q9H6L4 198 aa4.9□□□□□ -1.63
SF3B1-207ENST00000468925 SMYD3Q9H7B4 428 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms