RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 TBC1D3IA0A087WXS9 549 aa3.81□□□□□ -1.8
XRN1-206ENST00000467077 TBC1D3EA0A087X179 549 aa3.81□□□□□ -1.8
XRN1-206ENST00000467077 TBC1D3KA0A087X1G2 549 aa3.81□□□□□ -1.8
XRN1-206ENST00000467077 TCRBV7S3A2A0A539 114 aa3.81□□□□□ -1.8
XRN1-206ENST00000467077 TBC1D3BA6NDS4 549 aa3.81□□□□□ -1.8
XRN1-206ENST00000467077 FAM90A18PA6NE21 464 aa3.81□□□□□ -1.8
XRN1-206ENST00000467077 TBC1D3FA6NER0 549 aaPredicted RBP3.81□□□□□ -1.8
XRN1-206ENST00000467077 FAM90A16PA6NEW6 464 aa3.81□□□□□ -1.8
XRN1-206ENST00000467077 FAM90A9PA6NNJ1 464 aa3.81□□□□□ -1.8
XRN1-206ENST00000467077 SLC38A8A6NNN8 435 aa3.81□□□□□ -1.8
XRN1-206ENST00000467077 LGALS16A8MUM7 142 aa3.81□□□□□ -1.8
XRN1-206ENST00000467077 FAM90A5PA8MXJ8 464 aa3.81□□□□□ -1.8
XRN1-206ENST00000467077 TBC1D3LB9A6J9 549 aa3.81□□□□□ -1.8
XRN1-206ENST00000467077 CRLF1O75462 422 aa3.81□□□□□ -1.8
XRN1-206ENST00000467077 TNFRSF6BO95407 300 aa3.81□□□□□ -1.8
XRN1-206ENST00000467077 PMS2P2O95744 297 aa3.81□□□□□ -1.8
XRN1-206ENST00000467077 FAM90A15PP0C7V4 464 aa3.81□□□□□ -1.8
XRN1-206ENST00000467077 FAM90A14PP0C7W9 464 aa3.81□□□□□ -1.8
XRN1-206ENST00000467077 TBC1D3HP0C7X1 549 aa3.81□□□□□ -1.8
XRN1-206ENST00000467077 CYP3A7P24462 503 aa3.81□□□□□ -1.8
XRN1-206ENST00000467077 ZBTB16Q05516 673 aa3.81□□□□□ -1.8
XRN1-206ENST00000467077 PTK2BQ14289 1009 aa3.81□□□□□ -1.8
XRN1-206ENST00000467077 TRIM60Q495X7 471 aa3.81□□□□□ -1.8
XRN1-206ENST00000467077 C5orf22Q49AR2 442 aa3.81□□□□□ -1.8
XRN1-206ENST00000467077 ZNF569Q5MCW4 686 aa3.81□□□□□ -1.8
XRN1-206ENST00000467077 SYCP2LQ5T4T6 812 aa3.81□□□□□ -1.8
XRN1-206ENST00000467077 TBC1D3GQ6DHY5 549 aa3.81□□□□□ -1.8
XRN1-206ENST00000467077 TBC1D3CQ6IPX1 549 aa3.81□□□□□ -1.8
XRN1-206ENST00000467077 SLC30A9Q6PML9 568 aa3.81□□□□□ -1.8
XRN1-206ENST00000467077 TOGARAM2Q6ZUX3 1019 aa3.81□□□□□ -1.8
XRN1-206ENST00000467077 PATL1Q86TB9 770 aaKnown RBP3.81□□□□□ -1.8
XRN1-206ENST00000467077 ZDHHC23Q8IYP9 409 aa3.81□□□□□ -1.8
XRN1-206ENST00000467077 TBC1D3Q8IZP1 549 aaPredicted RBP3.81□□□□□ -1.8
XRN1-206ENST00000467077 TEX45Q8NA69 505 aa3.81□□□□□ -1.8
XRN1-206ENST00000467077 RSC1A1Q92681 617 aa3.81□□□□□ -1.8
XRN1-206ENST00000467077 WDR12Q9GZL7 423 aaKnown RBP3.81□□□□□ -1.8
XRN1-206ENST00000467077 SEL1LQ9UBV2 794 aa3.81□□□□□ -1.8
XRN1-206ENST00000467077 CFDP1Q9UEE9 299 aaPredicted RBP3.81□□□□□ -1.8
XRN1-206ENST00000467077 CNTN6Q9UQ52 1028 aa3.81□□□□□ -1.8
XRN1-206ENST00000467077 LRCH1Q9Y2L9 728 aa3.81□□□□□ -1.8
XRN1-206ENST00000467077 CASKIN1Q8WXD9 1431 aa3.8□□□□□ -1.8
XRN1-206ENST00000467077 MIA2Q96PC5 1412 aa3.8□□□□□ -1.8
XRN1-206ENST00000467077 CCNB3Q8WWL7 1395 aa3.8□□□□□ -1.8
XRN1-206ENST00000467077 C16orf97H3BN30 126 aa3.8□□□□□ -1.8
XRN1-206ENST00000467077 HSPB6O14558 160 aa3.8□□□□□ -1.8
XRN1-206ENST00000467077 KIF1CO43896 1103 aaKnown RBP3.8□□□□□ -1.8
XRN1-206ENST00000467077 LARGE1O95461 756 aa3.8□□□□□ -1.8
XRN1-206ENST00000467077 SETSIPP0DME0 302 aa3.8□□□□□ -1.8
XRN1-206ENST00000467077 CKMT1AP12532 417 aa3.8□□□□□ -1.8
XRN1-206ENST00000467077 TIMP3P35625 211 aa3.8□□□□□ -1.8
XRN1-206ENST00000467077 HTR3AP46098 478 aa3.8□□□□□ -1.8
XRN1-206ENST00000467077 CLCNKBP51801 687 aa3.8□□□□□ -1.8
XRN1-206ENST00000467077 DRG2P55039 364 aaKnown RBP3.8□□□□□ -1.8
XRN1-206ENST00000467077 IRX6P78412 446 aaPredicted RBP3.8□□□□□ -1.8
XRN1-206ENST00000467077 TNFAIP2Q03169 654 aa3.8□□□□□ -1.8
XRN1-206ENST00000467077 RNASELQ05823 741 aaKnown RBP3.8□□□□□ -1.8
XRN1-206ENST00000467077 VWA5B1Q5TIE3 1220 aa3.8□□□□□ -1.8
XRN1-206ENST00000467077 ZNF527Q8NB42 609 aa3.8□□□□□ -1.8
XRN1-206ENST00000467077 OR1N1Q8NGS0 311 aa3.8□□□□□ -1.8
XRN1-206ENST00000467077 CLEC4CQ8WTT0 213 aa3.8□□□□□ -1.8
XRN1-206ENST00000467077 HMGB4Q8WW32 186 aa3.8□□□□□ -1.8
XRN1-206ENST00000467077 EID2BQ96D98 161 aa3.8□□□□□ -1.8
XRN1-206ENST00000467077 TMEM120AQ9BXJ8 343 aa3.8□□□□□ -1.8
XRN1-206ENST00000467077 COPG1Q9Y678 874 aaKnown RBP3.8□□□□□ -1.8
XRN1-206ENST00000467077 SHPRHQ149N8 1683 aa3.8□□□□□ -1.8
XRN1-206ENST00000467077 TIAM1Q13009 1591 aa3.8□□□□□ -1.8
XRN1-206ENST00000467077 SCAF11Q99590 1463 aaKnown RBP3.79□□□□□ -1.8
XRN1-206ENST00000467077 FYCO1Q9BQS8 1478 aa3.79□□□□□ -1.8
XRN1-206ENST00000467077 FAM135BQ49AJ0 1406 aa3.79□□□□□ -1.8
XRN1-206ENST00000467077 DHX29Q7Z478 1369 aaKnown RBP3.79□□□□□ -1.8
XRN1-206ENST00000467077 ZNF644Q9H582 1327 aaPredicted RBP3.79□□□□□ -1.8
XRN1-206ENST00000467077 EP400Q96L91 3159 aa3.79□□□□□ -1.8
XRN1-206ENST00000467077 MBD3L5A6NJ08 208 aaPredicted RBP3.79□□□□□ -1.8
XRN1-206ENST00000467077 SKAP2O75563 359 aaPredicted RBP3.79□□□□□ -1.8
XRN1-206ENST00000467077 IGHV4-30-4P0DP06 118 aa3.79□□□□□ -1.8
XRN1-206ENST00000467077 GYS1P13807 737 aa3.79□□□□□ -1.8
XRN1-206ENST00000467077 PDIA3P30101 505 aaKnown RBP3.79□□□□□ -1.8
XRN1-206ENST00000467077 SREBF2Q12772 1141 aa3.79□□□□□ -1.8
XRN1-206ENST00000467077 PFKFB4Q16877 469 aa3.79□□□□□ -1.8
XRN1-206ENST00000467077 SYT16Q17RD7 645 aa3.79□□□□□ -1.8
XRN1-206ENST00000467077 ZACNQ401N2 412 aa3.79□□□□□ -1.8
XRN1-206ENST00000467077 ATPAF1Q5TC12 328 aaPredicted RBP3.79□□□□□ -1.8
XRN1-206ENST00000467077 PGBD2Q6P3X8 592 aa3.79□□□□□ -1.8
XRN1-206ENST00000467077 TMEM200AQ86VY9 491 aa3.79□□□□□ -1.8
XRN1-206ENST00000467077 SFR1Q86XK3 245 aa3.79□□□□□ -1.8
XRN1-206ENST00000467077 CNBD1Q8NA66 436 aa3.79□□□□□ -1.8
XRN1-206ENST00000467077 OR13A1Q8NGR1 328 aa3.79□□□□□ -1.8
XRN1-206ENST00000467077 FAM110DQ8TAY7 271 aaPredicted RBP3.79□□□□□ -1.8
XRN1-206ENST00000467077 TMEM18Q96B42 140 aa3.79□□□□□ -1.8
XRN1-206ENST00000467077 EGFL8Q99944 293 aa3.79□□□□□ -1.8
XRN1-206ENST00000467077 RTKNQ9BST9 563 aa3.79□□□□□ -1.8
XRN1-206ENST00000467077 KATNAL1Q9BW62 490 aa3.79□□□□□ -1.8
XRN1-206ENST00000467077 LIN7CQ9NUP9 197 aaKnown RBP3.79□□□□□ -1.8
XRN1-206ENST00000467077 LZTS1Q9Y250 596 aa3.79□□□□□ -1.8
XRN1-206ENST00000467077 PAM16Q9Y3D7 125 aa3.79□□□□□ -1.8
XRN1-206ENST00000467077 PKP3Q9Y446 797 aa3.79□□□□□ -1.8
XRN1-206ENST00000467077 PIK3C2BO00750 1634 aa3.79□□□□□ -1.8
XRN1-206ENST00000467077 COL16A1Q07092 1604 aaPredicted RBP3.79□□□□□ -1.8
XRN1-206ENST00000467077 CHD2O14647 1828 aaKnown RBP3.79□□□□□ -1.8
XRN1-206ENST00000467077 MYO5BQ9ULV0 1848 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms