RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 GLUD1P00367 558 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 NPR3P17342 541 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 PRKCZQ05513 592 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 TOP3AQ13472 1001 aaPredicted RBP8.76□□□□□ -1.01
HPS4-209ENST00000466781 NEDD8Q15843 81 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 PFKFB4Q16877 469 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 PHYKPLQ8IUZ5 450 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 OR10H5Q8NGA6 315 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 SLC25A23Q9BV35 468 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 RHOBTB2Q9BYZ6 727 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 PHF11Q9UIL8 331 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 RWDD3Q9Y3V2 267 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 UBIAD1Q9Y5Z9 338 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 H0Y858 1186 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 RBMXL2O75526 392 aaKnown RBP8.76□□□□□ -1.01
HPS4-209ENST00000466781 RECQL5O94762 991 aaPredicted RBP8.76□□□□□ -1.01
HPS4-209ENST00000466781 MLYCDO95822 493 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 GIMD1P0DJR0 217 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 BMP7P18075 431 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 MYL9P24844 172 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 LRPAP1P30533 357 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 RAPSNQ13702 412 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 NTRK3Q16288 839 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 PLA2G4EQ3MJ16 856 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 ZC3H12AQ5D1E8 599 aaKnown RBP8.76□□□□□ -1.01
HPS4-209ENST00000466781 SAMD4BQ5PRF9 694 aaKnown RBP8.76□□□□□ -1.01
HPS4-209ENST00000466781 MZT2BQ6NZ67 158 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 VSIG10LQ86VR7 867 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 NRSN1Q8IZ57 195 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 FAM98AQ8NCA5 519 aaKnown RBP8.76□□□□□ -1.01
HPS4-209ENST00000466781 FBXO22Q8NEZ5 403 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 TSPAN14Q8NG11 270 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 OR4A15Q8NGL6 344 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 OXNAD1Q96HP4 312 aaPredicted RBP8.76□□□□□ -1.01
HPS4-209ENST00000466781 DCLRE1BQ9H816 532 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 ETNK2Q9NVF9 386 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 CMTM6Q9NX76 183 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.76□□□□□ -1.01
HPS4-209ENST00000466781 C1orf232A0A0U1RR37 186 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 TPP1O14773 563 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 RIPK2O43353 540 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 IDH3BO43837 385 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 CALCAP01258 141 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 TFPIP10646 304 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 CD52P31358 61 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 HNF4AP41235 474 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 RARRES1P49788 294 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 SPIRE1Q08AE8 756 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 CNSTQ6PJW8 725 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 TMC5Q6UXY8 1006 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 UNC93AQ86WB7 457 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 RP9Q8TA86 221 aaKnown RBP8.76□□□□□ -1.01
HPS4-209ENST00000466781 FBXO30Q8TB52 745 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 COQ7Q99807 217 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 TM6SF2Q9BZW4 377 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.76□□□□□ -1.01
HPS4-209ENST00000466781 TMEM134Q9H6X4 195 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 RXFP1Q9HBX9 757 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 PRDM8Q9NQV8 689 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 ELOVL2Q9NXB9 296 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 CLIC5Q9NZA1 410 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 ABI3Q9P2A4 366 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 OR12D3Q9UGF7 316 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 TOPAZ1Q8N9V7 1692 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 UBE2QL1A1L167 161 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 ELFN1P0C7U0 828 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 MIPP30301 263 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 TGFBR2P37173 567 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 SUZ12Q15022 739 aaKnown RBP8.76□□□□□ -1.01
HPS4-209ENST00000466781 TIMM50Q3ZCQ8 353 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 SPANXN2Q5MJ10 180 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 ZFP1Q6P2D0 407 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 GPR156Q8NFN8 814 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 TEX47Q8TBZ9 253 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 METTL21AQ8WXB1 218 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 CRELD1Q96HD1 420 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 VPS35Q96QK1 796 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 NECTIN3Q9NQS3 549 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 PTGFRNQ9P2B2 879 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 NAALADL1Q9UQQ1 740 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 ASTN2O75129 1339 aaPredicted RBP8.76□□□□□ -1.01
HPS4-209ENST00000466781 NEDD8-MDP1E9PL57 170 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 TAF4O00268 1085 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 KPNA4O00629 521 aaPredicted RBP8.76□□□□□ -1.01
HPS4-209ENST00000466781 LYNP07948 512 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 PRLRP16471 622 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 PSMB4P28070 264 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 SRP54P61011 504 aaKnown RBP8.76□□□□□ -1.01
HPS4-209ENST00000466781 GCNT1Q02742 428 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 SULT2A1Q06520 285 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 CRHR2Q13324 411 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 NDUFA9Q16795 377 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 LSM12Q3MHD2 195 aaKnown RBP8.76□□□□□ -1.01
HPS4-209ENST00000466781 CYB5D1Q6P9G0 228 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.76□□□□□ -1.01
HPS4-209ENST00000466781 LEMD2Q8NC56 503 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 FNDC11Q9BVV2 318 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 SLC28A3Q9HAS3 691 aa8.76□□□□□ -1.01
HPS4-209ENST00000466781 FBXO6Q9NRD1 293 aaPredicted RBP8.76□□□□□ -1.01
HPS4-209ENST00000466781 DOT1LQ8TEK3 1739 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms