RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 AURKAO14965 403 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 DAPK3O43293 454 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 RAD51CO43502 376 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 CACNG3O60359 315 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 GCATO75600 419 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 GAS8O95995 478 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 KLKB1P03952 638 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 RHOP08100 348 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 SPATA31D3P0C874 917 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 SRGAP2BP0DMP2 458 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 RBP3P10745 1247 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 EPCAMP16422 314 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 GOT1P17174 413 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 TACR2P21452 398 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 CCNCP24863 283 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 CFPP27918 469 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 EPHB2P29323 1055 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 CHKAP35790 457 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 MAPKAPK2P49137 400 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 CDH4P55283 916 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 TPI1P60174 286 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 OTUD4Q01804 1114 aaKnown RBP5.61□□□□□ -1.51
VPS41-211ENST00000466017 CAV1Q03135 178 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 GALNT2Q10471 571 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 SLC10A2Q12908 348 aaPredicted RBP5.61□□□□□ -1.51
VPS41-211ENST00000466017 CUL1Q13616 776 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 PTK6Q13882 451 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 BYSLQ13895 437 aaKnown RBP5.61□□□□□ -1.51
VPS41-211ENST00000466017 P3H1Q32P28 736 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 ARHGAP15Q53QZ3 475 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 PPP6R3Q5H9R7 873 aaPredicted RBP5.61□□□□□ -1.51
VPS41-211ENST00000466017 TEX35Q5T0J7 233 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 FAM72AQ5TYM5 149 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 KAZNQ674X7 775 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 MBLAC2Q68D91 279 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 FAM72DQ6L9T8 149 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 C8orf74Q6P047 294 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 TTC27Q6P3X3 843 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 TMCO3Q6UWJ1 677 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 ZNF783Q6ZMS7 281 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 SPATA31D4Q6ZUB0 917 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 CHST9Q7L1S5 443 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 ADGRD2Q7Z7M1 963 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 PCGF5Q86SE9 256 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 GPR149Q86SP6 731 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 FAM72BQ86X60 149 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 KLHDC8BQ8IXV7 354 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 CCDC105Q8IYK2 499 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 PYROXD2Q8N2H3 581 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 ALLCQ8N6M5 410 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 RTL3Q8N8U3 475 aaKnown RBP5.61□□□□□ -1.51
VPS41-211ENST00000466017 ZNF557Q8N988 423 aaPredicted RBP5.61□□□□□ -1.51
VPS41-211ENST00000466017 FBXO15Q8NCQ5 510 aaPredicted RBP5.61□□□□□ -1.51
VPS41-211ENST00000466017 C1orf54Q8WWF1 131 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 ANKRD7Q92527 254 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 HDAC11Q96DB2 347 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 TBC1D31Q96DN5 1066 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 PKNOX2Q96KN3 472 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 PTCHD1Q96NR3 888 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 VAT1Q99536 393 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 PARD6BQ9BYG5 372 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 MAGEB5Q9BZ81 275 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 ZYG11BQ9C0D3 744 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 DDX47Q9H0S4 455 aaKnown RBP5.61□□□□□ -1.51
VPS41-211ENST00000466017 TSPYL1Q9H0U9 437 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 SFXN1Q9H9B4 322 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 KIF9Q9HAQ2 790 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 TRPV4Q9HBA0 871 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 USP29Q9HBJ7 922 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 PCDH9Q9HC56 1237 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 GPATCH2LQ9NWQ4 482 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 SMARCAL1Q9NZC9 954 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 DTLQ9NZJ0 730 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 WHRNQ9P202 907 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 KLHL14Q9P2G3 628 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 TBC1D14Q9P2M4 693 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 ZNF212Q9UDV6 495 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 AMACRQ9UHK6 382 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 NUDT5Q9UKK9 219 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 ACSL6Q9UKU0 697 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 DNPEPQ9ULA0 475 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 NEU3Q9UQ49 428 aa5.61□□□□□ -1.51
VPS41-211ENST00000466017 UTP11Q9Y3A2 253 aaKnown RBP5.61□□□□□ -1.51
VPS41-211ENST00000466017 NOTCH4Q99466 2003 aa5.6□□□□□ -1.51
VPS41-211ENST00000466017 SYNJ2BP-COX16A0A087WUM0 186 aa5.6□□□□□ -1.51
VPS41-211ENST00000466017 UQCRHLA0A096LP55 91 aa5.6□□□□□ -1.51
VPS41-211ENST00000466017 C2orf78A6NCI8 922 aa5.6□□□□□ -1.51
VPS41-211ENST00000466017 EPOPA6NHQ4 379 aa5.6□□□□□ -1.51
VPS41-211ENST00000466017 F5H5T6 163 aa5.6□□□□□ -1.51
VPS41-211ENST00000466017 PPP1R12AO14974 1030 aaPredicted RBP5.6□□□□□ -1.51
VPS41-211ENST00000466017 PER2O15055 1255 aa5.6□□□□□ -1.51
VPS41-211ENST00000466017 CCL16O15467 120 aa5.6□□□□□ -1.51
VPS41-211ENST00000466017 TTI1O43156 1089 aa5.6□□□□□ -1.51
VPS41-211ENST00000466017 MSI1O43347 362 aaKnown RBP5.6□□□□□ -1.51
VPS41-211ENST00000466017 ATP8B1O43520 1251 aa5.6□□□□□ -1.51
VPS41-211ENST00000466017 CREB3O43889 395 aa5.6□□□□□ -1.51
VPS41-211ENST00000466017 CLDN11O75508 207 aa5.6□□□□□ -1.51
VPS41-211ENST00000466017 RFPL2O75678 378 aa5.6□□□□□ -1.51
VPS41-211ENST00000466017 HEXIM1O94992 359 aaKnown RBP5.6□□□□□ -1.51
VPS41-211ENST00000466017 UQCRHP07919 91 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms