RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 SLC41A1Q8IVJ1 513 aa17.09■□□□□ 0.33
USP39-211ENST00000465282 RASGEF1CQ8N431 466 aa17.09■□□□□ 0.33
USP39-211ENST00000465282 PAF1Q8N7H5 531 aa17.09■□□□□ 0.33
USP39-211ENST00000465282 FEM1CQ96JP0 617 aa17.09■□□□□ 0.33
USP39-211ENST00000465282 HSPA12BQ96MM6 686 aa17.09■□□□□ 0.33
USP39-211ENST00000465282 OSBPL9Q96SU4 736 aa17.09■□□□□ 0.33
USP39-211ENST00000465282 C6orf106Q9H6K1 298 aaPredicted RBP17.09■□□□□ 0.33
USP39-211ENST00000465282 USP29Q9HBJ7 922 aa17.09■□□□□ 0.33
USP39-211ENST00000465282 GLOD4Q9HC38 313 aa17.09■□□□□ 0.33
USP39-211ENST00000465282 KLHL8Q9P2G9 620 aaPredicted RBP17.09■□□□□ 0.33
USP39-211ENST00000465282 PHTF1Q9UMS5 762 aa17.09■□□□□ 0.33
USP39-211ENST00000465282 RPL26L1Q9UNX3 145 aaKnown RBP17.09■□□□□ 0.33
USP39-211ENST00000465282 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.09■□□□□ 0.33
USP39-211ENST00000465282 PCDHGC4Q9Y5F7 938 aa17.09■□□□□ 0.33
USP39-211ENST00000465282 FADS3Q9Y5Q0 445 aa17.09■□□□□ 0.33
USP39-211ENST00000465282 PI4KAP42356 2102 aa17.09■□□□□ 0.33
USP39-211ENST00000465282 GON4LQ3T8J9 2241 aa17.09■□□□□ 0.33
USP39-211ENST00000465282 PRR23AA6NEV1 266 aa17.08■□□□□ 0.32
USP39-211ENST00000465282 FAM47DPA6NHR8 397 aa17.08■□□□□ 0.32
USP39-211ENST00000465282 MEI4A8MW99 385 aa17.08■□□□□ 0.32
USP39-211ENST00000465282 NEMP1O14524 444 aa17.08■□□□□ 0.32
USP39-211ENST00000465282 KCNN4O15554 427 aa17.08■□□□□ 0.32
USP39-211ENST00000465282 LATO43561 262 aa17.08■□□□□ 0.32
USP39-211ENST00000465282 OPHN1O60890 802 aa17.08■□□□□ 0.32
USP39-211ENST00000465282 PTGER3P43115 390 aa17.08■□□□□ 0.32
USP39-211ENST00000465282 RPS21P63220 83 aaKnown RBP17.08■□□□□ 0.32
USP39-211ENST00000465282 DSC2Q02487 901 aa17.08■□□□□ 0.32
USP39-211ENST00000465282 NIPAL4Q0D2K0 466 aa17.08■□□□□ 0.32
USP39-211ENST00000465282 LONRF2Q1L5Z9 754 aa17.08■□□□□ 0.32
USP39-211ENST00000465282 ARMC12Q5T9G4 340 aa17.08■□□□□ 0.32
USP39-211ENST00000465282 PEAR1Q5VY43 1037 aaPredicted RBP17.08■□□□□ 0.32
USP39-211ENST00000465282 ITPRIPL1Q6GPH6 555 aa17.08■□□□□ 0.32
USP39-211ENST00000465282 ERAP2Q6P179 960 aa17.08■□□□□ 0.32
USP39-211ENST00000465282 PID1Q7Z2X4 250 aa17.08■□□□□ 0.32
USP39-211ENST00000465282 CYP2U1Q7Z449 544 aa17.08■□□□□ 0.32
USP39-211ENST00000465282 PRPF39Q86UA1 669 aaKnown RBP17.08■□□□□ 0.32
USP39-211ENST00000465282 SYT12Q8IV01 421 aa17.08■□□□□ 0.32
USP39-211ENST00000465282 ZNF567Q8N184 647 aa17.08■□□□□ 0.32
USP39-211ENST00000465282 RUBCNQ92622 972 aa17.08■□□□□ 0.32
USP39-211ENST00000465282 BIRC7Q96CA5 298 aa17.08■□□□□ 0.32
USP39-211ENST00000465282 NSMCE3Q96MG7 304 aa17.08■□□□□ 0.32
USP39-211ENST00000465282 FCRL5Q96RD9 977 aa17.08■□□□□ 0.32
USP39-211ENST00000465282 NAPGQ99747 312 aaPredicted RBP17.08■□□□□ 0.32
USP39-211ENST00000465282 VPS45Q9NRW7 570 aa17.08■□□□□ 0.32
USP39-211ENST00000465282 SUSD2Q9UGT4 822 aa17.08■□□□□ 0.32
USP39-211ENST00000465282 DMTF1Q9Y222 760 aa17.08■□□□□ 0.32
USP39-211ENST00000465282 R3HDM2Q9Y2K5 976 aaKnown RBP17.08■□□□□ 0.32
USP39-211ENST00000465282 PCDHB9Q9Y5E1 797 aa17.08■□□□□ 0.32
USP39-211ENST00000465282 RAI2Q9Y5P3 530 aa17.08■□□□□ 0.32
USP39-211ENST00000465282 USP34Q70CQ2 3546 aa17.07■□□□□ 0.32
USP39-211ENST00000465282 OTOGLQ3ZCN5 2332 aa17.07■□□□□ 0.32
USP39-211ENST00000465282 TTC24A2A3L6 582 aaPredicted RBP17.07■□□□□ 0.32
USP39-211ENST00000465282 CTAGE9A4FU28 777 aa17.07■□□□□ 0.32
USP39-211ENST00000465282 C5orf60A6NFR6 353 aa17.07■□□□□ 0.32
USP39-211ENST00000465282 RIOK3O14730 519 aaKnown RBP17.07■□□□□ 0.32
USP39-211ENST00000465282 LIASO43766 372 aa17.07■□□□□ 0.32
USP39-211ENST00000465282 FZD6O60353 706 aa17.07■□□□□ 0.32
USP39-211ENST00000465282 FOXD2O60548 495 aaPredicted RBP17.07■□□□□ 0.32
USP39-211ENST00000465282 GJB3O75712 270 aa17.07■□□□□ 0.32
USP39-211ENST00000465282 PCDH8O95206 1070 aa17.07■□□□□ 0.32
USP39-211ENST00000465282 PGLSO95336 258 aa17.07■□□□□ 0.32
USP39-211ENST00000465282 IGHV4-34P06331 123 aa17.07■□□□□ 0.32
USP39-211ENST00000465282 MMP2P08253 660 aa17.07■□□□□ 0.32
USP39-211ENST00000465282 GNSP15586 552 aa17.07■□□□□ 0.32
USP39-211ENST00000465282 CD27P26842 260 aa17.07■□□□□ 0.32
USP39-211ENST00000465282 SKOR1P84550 965 aa17.07■□□□□ 0.32
USP39-211ENST00000465282 CREB5Q02930 508 aa17.07■□□□□ 0.32
USP39-211ENST00000465282 TRAF2Q12933 501 aa17.07■□□□□ 0.32
USP39-211ENST00000465282 OASLQ15646 514 aaKnown RBP17.07■□□□□ 0.32
USP39-211ENST00000465282 LPAL2Q16609 132 aa17.07■□□□□ 0.32
USP39-211ENST00000465282 PAPD7Q5XG87 772 aaKnown RBP17.07■□□□□ 0.32
USP39-211ENST00000465282 B4GALNT4Q76KP1 1039 aa17.07■□□□□ 0.32
USP39-211ENST00000465282 HORMAD1Q86X24 394 aa17.07■□□□□ 0.32
USP39-211ENST00000465282 CEP76Q8TAP6 659 aa17.07■□□□□ 0.32
USP39-211ENST00000465282 ACTRT1Q8TDG2 376 aa17.07■□□□□ 0.32
USP39-211ENST00000465282 ASB12Q8WXK4 309 aa17.07■□□□□ 0.32
USP39-211ENST00000465282 TADA1Q96BN2 335 aa17.07■□□□□ 0.32
USP39-211ENST00000465282 SPATA13Q96N96 652 aa17.07■□□□□ 0.32
USP39-211ENST00000465282 TDRD1Q9BXT4 1180 aaKnown RBP17.07■□□□□ 0.32
USP39-211ENST00000465282 ADGRE3Q9BY15 652 aa17.07■□□□□ 0.32
USP39-211ENST00000465282 CEP41Q9BYV8 373 aa17.07■□□□□ 0.32
USP39-211ENST00000465282 NCDNQ9UBB6 729 aa17.07■□□□□ 0.32
USP39-211ENST00000465282 PILRBQ9UKJ0 227 aa17.07■□□□□ 0.32
USP39-211ENST00000465282 DNPEPQ9ULA0 475 aa17.07■□□□□ 0.32
USP39-211ENST00000465282 DRG1Q9Y295 367 aaKnown RBP17.07■□□□□ 0.32
USP39-211ENST00000465282 PPIL1Q9Y3C6 166 aa17.07■□□□□ 0.32
USP39-211ENST00000465282 DOCK9Q9BZ29 2069 aa17.06■□□□□ 0.32
USP39-211ENST00000465282 ZFHX2Q9C0A1 2572 aaPredicted RBP17.06■□□□□ 0.32
USP39-211ENST00000465282 A0A1W2PPC4 97 aa17.06■□□□□ 0.32
USP39-211ENST00000465282 PRR5-ARHGAP8B1AHC4 643 aa17.06■□□□□ 0.32
USP39-211ENST00000465282 PGRMC1O00264 195 aaKnown RBP17.06■□□□□ 0.32
USP39-211ENST00000465282 RNGTTO60942 597 aaKnown RBP17.06■□□□□ 0.32
USP39-211ENST00000465282 GCATO75600 419 aa17.06■□□□□ 0.32
USP39-211ENST00000465282 FSBPO95073 299 aa17.06■□□□□ 0.32
USP39-211ENST00000465282 CPP00450 1065 aa17.06■□□□□ 0.32
USP39-211ENST00000465282 EPOP01588 193 aa17.06■□□□□ 0.32
USP39-211ENST00000465282 ITGAVP06756 1048 aa17.06■□□□□ 0.32
USP39-211ENST00000465282 ITPKAP23677 461 aa17.06■□□□□ 0.32
USP39-211ENST00000465282 CD86P42081 329 aa17.06■□□□□ 0.32
USP39-211ENST00000465282 ABL2P42684 1182 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms