RNA–Protein interactions for RNA: ENST00000464255.1

CTDSP1-206, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-206ENST00000464255 AMPD1P23109 780 aa13.21□□□□□ -0.29
CTDSP1-206ENST00000464255 INSM1Q01101 510 aaPredicted RBP13.21□□□□□ -0.29
CTDSP1-206ENST00000464255 SLC25A11Q02978 314 aaKnown RBP13.21□□□□□ -0.29
CTDSP1-206ENST00000464255 RAD51Q06609 339 aa13.21□□□□□ -0.29
CTDSP1-206ENST00000464255 CYP4F3Q08477 520 aa13.21□□□□□ -0.29
CTDSP1-206ENST00000464255 TARDBPQ13148 414 aaKnown RBP eCLIP13.21□□□□□ -0.29
CTDSP1-206ENST00000464255 ILKQ13418 452 aa13.21□□□□□ -0.29
CTDSP1-206ENST00000464255 PDE1CQ14123 709 aaPredicted RBP13.21□□□□□ -0.29
CTDSP1-206ENST00000464255 ACAP1Q15027 740 aa13.21□□□□□ -0.29
CTDSP1-206ENST00000464255 SMTNL2Q2TAL5 461 aa13.21□□□□□ -0.29
CTDSP1-206ENST00000464255 WSCD2Q2TBF2 565 aa13.21□□□□□ -0.29
CTDSP1-206ENST00000464255 BOLA3Q53S33 107 aa13.21□□□□□ -0.29
CTDSP1-206ENST00000464255 NYAP1Q6ZVC0 841 aa13.21□□□□□ -0.29
CTDSP1-206ENST00000464255 SRLQ86TD4 932 aa13.21□□□□□ -0.29
CTDSP1-206ENST00000464255 CPNE8Q86YQ8 564 aa13.21□□□□□ -0.29
CTDSP1-206ENST00000464255 NIPA2Q8N8Q9 360 aa13.21□□□□□ -0.29
CTDSP1-206ENST00000464255 ECHDC3Q96DC8 303 aa13.21□□□□□ -0.29
CTDSP1-206ENST00000464255 ZNF641Q96N77 438 aaPredicted RBP13.21□□□□□ -0.29
CTDSP1-206ENST00000464255 WRAP53Q9BUR4 548 aaKnown RBP13.21□□□□□ -0.29
CTDSP1-206ENST00000464255 TCEAL2Q9H3H9 227 aaPredicted RBP13.21□□□□□ -0.29
CTDSP1-206ENST00000464255 DONSONQ9NYP3 566 aa13.21□□□□□ -0.29
CTDSP1-206ENST00000464255 IFNKQ9P0W0 207 aa13.21□□□□□ -0.29
CTDSP1-206ENST00000464255 IPO11Q9UI26 975 aaKnown RBP13.21□□□□□ -0.29
CTDSP1-206ENST00000464255 TTC24A2A3L6 582 aaPredicted RBP13.2□□□□□ -0.3
CTDSP1-206ENST00000464255 DFFAO00273 331 aa13.2□□□□□ -0.3
CTDSP1-206ENST00000464255 TRAFD1O14545 582 aaPredicted RBP13.2□□□□□ -0.3
CTDSP1-206ENST00000464255 RIOK3O14730 519 aaKnown RBP13.2□□□□□ -0.3
CTDSP1-206ENST00000464255 DAPK3O43293 454 aa13.2□□□□□ -0.3
CTDSP1-206ENST00000464255 GCATO75600 419 aa13.2□□□□□ -0.3
CTDSP1-206ENST00000464255 PALMO75781 387 aa13.2□□□□□ -0.3
CTDSP1-206ENST00000464255 PRKCGP05129 697 aa13.2□□□□□ -0.3
CTDSP1-206ENST00000464255 CKMT1AP12532 417 aa13.2□□□□□ -0.3
CTDSP1-206ENST00000464255 DESP17661 470 aa13.2□□□□□ -0.3
CTDSP1-206ENST00000464255 HNRNPH3P31942 346 aaKnown RBP13.2□□□□□ -0.3
CTDSP1-206ENST00000464255 SUOXP51687 545 aa13.2□□□□□ -0.3
CTDSP1-206ENST00000464255 ARSEP51690 589 aa13.2□□□□□ -0.3
CTDSP1-206ENST00000464255 ZNF135P52742 658 aaPredicted RBP13.2□□□□□ -0.3
CTDSP1-206ENST00000464255 SEMG2Q02383 582 aa13.2□□□□□ -0.3
CTDSP1-206ENST00000464255 IL10RBQ08334 325 aa13.2□□□□□ -0.3
CTDSP1-206ENST00000464255 NSUN2Q08J23 767 aaKnown RBP eCLIP13.2□□□□□ -0.3
CTDSP1-206ENST00000464255 SLC10A7Q0GE19 358 aa13.2□□□□□ -0.3
CTDSP1-206ENST00000464255 HES3Q5TGS1 186 aa13.2□□□□□ -0.3
CTDSP1-206ENST00000464255 VPS36Q86VN1 386 aa13.2□□□□□ -0.3
CTDSP1-206ENST00000464255 PARGQ86W56 976 aa13.2□□□□□ -0.3
CTDSP1-206ENST00000464255 CACTIN-AS1Q8N1I8 211 aa13.2□□□□□ -0.3
CTDSP1-206ENST00000464255 PDCD7Q8N8D1 485 aaKnown RBP13.2□□□□□ -0.3
CTDSP1-206ENST00000464255 FAM181AQ8N9Y4 354 aa13.2□□□□□ -0.3
CTDSP1-206ENST00000464255 ZNF548Q8NEK5 533 aaPredicted RBP13.2□□□□□ -0.3
CTDSP1-206ENST00000464255 FAM71BQ8TC56 605 aa13.2□□□□□ -0.3
CTDSP1-206ENST00000464255 FUBP1Q96AE4 644 aaKnown RBP13.2□□□□□ -0.3
CTDSP1-206ENST00000464255 CSPG4P5Q96PW8 444 aa13.2□□□□□ -0.3
CTDSP1-206ENST00000464255 TUBGCP5Q96RT8 1024 aa13.2□□□□□ -0.3
CTDSP1-206ENST00000464255 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.2□□□□□ -0.3
CTDSP1-206ENST00000464255 NLGN3Q9NZ94 848 aa13.2□□□□□ -0.3
CTDSP1-206ENST00000464255 RAXQ9Y2V3 346 aa13.2□□□□□ -0.3
CTDSP1-206ENST00000464255 COQ6Q9Y2Z9 468 aa13.2□□□□□ -0.3
CTDSP1-206ENST00000464255 LUC7L2Q9Y383 392 aaKnown RBP13.2□□□□□ -0.3
CTDSP1-206ENST00000464255 GPSM3Q9Y4H4 160 aa13.2□□□□□ -0.3
CTDSP1-206ENST00000464255 LRRK1Q38SD2 2015 aa13.2□□□□□ -0.3
CTDSP1-206ENST00000464255 TM7SF2O76062 418 aa13.19□□□□□ -0.3
CTDSP1-206ENST00000464255 JUPP14923 745 aa13.19□□□□□ -0.3
CTDSP1-206ENST00000464255 GM2AP17900 193 aa13.19□□□□□ -0.3
CTDSP1-206ENST00000464255 CASP14P31944 242 aa13.19□□□□□ -0.3
CTDSP1-206ENST00000464255 MMP12P39900 470 aa13.19□□□□□ -0.3
CTDSP1-206ENST00000464255 LIG3P49916 1009 aa13.19□□□□□ -0.3
CTDSP1-206ENST00000464255 HNRNPKP61978 463 aaKnown RBP eCLIP13.19□□□□□ -0.34e-6■□□□□ 8.8
CTDSP1-206ENST00000464255 RALGDSQ12967 914 aa13.19□□□□□ -0.3
CTDSP1-206ENST00000464255 PIGHQ14442 188 aaPredicted RBP13.19□□□□□ -0.3
CTDSP1-206ENST00000464255 RFTN1Q14699 578 aaPredicted RBP13.19□□□□□ -0.3
CTDSP1-206ENST00000464255 AGERQ15109 404 aa13.19□□□□□ -0.3
CTDSP1-206ENST00000464255 IRF4Q15306 451 aa13.19□□□□□ -0.3
CTDSP1-206ENST00000464255 ASTE1Q2TB18 679 aaPredicted RBP13.19□□□□□ -0.3
CTDSP1-206ENST00000464255 TDRD12Q587J7 1177 aaKnown RBP13.19□□□□□ -0.3
CTDSP1-206ENST00000464255 KCTD16Q68DU8 428 aa13.19□□□□□ -0.3
CTDSP1-206ENST00000464255 ALKBH5Q6P6C2 394 aaKnown RBP13.19□□□□□ -0.3
CTDSP1-206ENST00000464255 BRAT1Q6PJG6 821 aa13.19□□□□□ -0.3
CTDSP1-206ENST00000464255 RBFAQ8N0V3 343 aa13.19□□□□□ -0.3
CTDSP1-206ENST00000464255 PGBD5Q8N414 524 aa13.19□□□□□ -0.3
CTDSP1-206ENST00000464255 DCBLD1Q8N8Z6 715 aa13.19□□□□□ -0.3
CTDSP1-206ENST00000464255 CXorf40AQ8TE69 158 aa13.19□□□□□ -0.3
CTDSP1-206ENST00000464255 TEKT4Q8WW24 435 aa13.19□□□□□ -0.3
CTDSP1-206ENST00000464255 HSPH1Q92598 858 aa13.19□□□□□ -0.3
CTDSP1-206ENST00000464255 APOLD1Q96LR9 279 aa13.19□□□□□ -0.3
CTDSP1-206ENST00000464255 PSKH2Q96QS6 385 aa13.19□□□□□ -0.3
CTDSP1-206ENST00000464255 NCAPGQ9BPX3 1015 aa13.19□□□□□ -0.3
CTDSP1-206ENST00000464255 NUP85Q9BW27 656 aa13.19□□□□□ -0.3
CTDSP1-206ENST00000464255 XPO4Q9C0E2 1151 aaKnown RBP13.19□□□□□ -0.3
CTDSP1-206ENST00000464255 ZWILCHQ9H900 591 aa13.19□□□□□ -0.3
CTDSP1-206ENST00000464255 PCDH18Q9HCL0 1135 aa13.19□□□□□ -0.3
CTDSP1-206ENST00000464255 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.19□□□□□ -0.3
CTDSP1-206ENST00000464255 CSNK1G3Q9Y6M4 447 aa13.19□□□□□ -0.3
CTDSP1-206ENST00000464255 ATRXP46100 2492 aa13.19□□□□□ -0.3
CTDSP1-206ENST00000464255 MYLKQ15746 1914 aa13.19□□□□□ -0.3
CTDSP1-206ENST00000464255 MAFKO60675 156 aa13.18□□□□□ -0.3
CTDSP1-206ENST00000464255 CD48P09326 243 aa13.18□□□□□ -0.3
CTDSP1-206ENST00000464255 C6P13671 934 aa13.18□□□□□ -0.3
CTDSP1-206ENST00000464255 JUNDP17535 347 aa13.18□□□□□ -0.3
CTDSP1-206ENST00000464255 CR2P20023 1033 aa13.18□□□□□ -0.3
CTDSP1-206ENST00000464255 EIF4A3P38919 411 aaKnown RBP13.18□□□□□ -0.3
CTDSP1-206ENST00000464255 YPEL5P62699 121 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms