RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 BTN2A2Q8WVV5 523 aa19.04■□□□□ 0.64
SF3A1-205ENST00000463818 ZNF641Q96N77 438 aaPredicted RBP19.04■□□□□ 0.64
SF3A1-205ENST00000463818 TCEAL2Q9H3H9 227 aaPredicted RBP19.04■□□□□ 0.64
SF3A1-205ENST00000463818 USP29Q9HBJ7 922 aa19.04■□□□□ 0.64
SF3A1-205ENST00000463818 PCDH12Q9NPG4 1184 aa19.04■□□□□ 0.64
SF3A1-205ENST00000463818 SCUBE2Q9NQ36 999 aa19.04■□□□□ 0.64
SF3A1-205ENST00000463818 COQ6Q9Y2Z9 468 aa19.04■□□□□ 0.64
SF3A1-205ENST00000463818 SCINQ9Y6U3 715 aa19.04■□□□□ 0.64
SF3A1-205ENST00000463818 CACNA1GO43497 2377 aa19.03■□□□□ 0.64
SF3A1-205ENST00000463818 A0A087WV48 116 aa19.03■□□□□ 0.64
SF3A1-205ENST00000463818 TSPAN11A1L157 253 aa19.03■□□□□ 0.64
SF3A1-205ENST00000463818 DFFAO00273 331 aa19.03■□□□□ 0.64
SF3A1-205ENST00000463818 LRCH4O75427 683 aa19.03■□□□□ 0.64
SF3A1-205ENST00000463818 MYBL1P10243 752 aa19.03■□□□□ 0.64
SF3A1-205ENST00000463818 EIF4A3P38919 411 aaKnown RBP19.03■□□□□ 0.64
SF3A1-205ENST00000463818 RGRP47804 291 aa19.03■□□□□ 0.64
SF3A1-205ENST00000463818 CSNK1DP48730 415 aa19.03■□□□□ 0.64
SF3A1-205ENST00000463818 HCAR3P49019 387 aa19.03■□□□□ 0.64
SF3A1-205ENST00000463818 DEFB133Q30KQ1 61 aa19.03■□□□□ 0.64
SF3A1-205ENST00000463818 ARHGAP36Q6ZRI8 547 aa19.03■□□□□ 0.64
SF3A1-205ENST00000463818 PDZD3Q86UT5 571 aa19.03■□□□□ 0.64
SF3A1-205ENST00000463818 RBFAQ8N0V3 343 aa19.03■□□□□ 0.64
SF3A1-205ENST00000463818 TSEN2Q8NCE0 465 aaKnown RBP19.03■□□□□ 0.64
SF3A1-205ENST00000463818 TRIM11Q96F44 468 aa19.03■□□□□ 0.64
SF3A1-205ENST00000463818 ISCUQ9H1K1 167 aa19.03■□□□□ 0.64
SF3A1-205ENST00000463818 CBX8Q9HC52 389 aa19.03■□□□□ 0.64
SF3A1-205ENST00000463818 MRPL47Q9HD33 250 aaKnown RBP19.03■□□□□ 0.64
SF3A1-205ENST00000463818 EVA1BQ9NVM1 165 aa19.03■□□□□ 0.64
SF3A1-205ENST00000463818 CWC15Q9P013 229 aaKnown RBP19.03■□□□□ 0.64
SF3A1-205ENST00000463818 SPASTQ9UBP0 616 aa19.03■□□□□ 0.64
SF3A1-205ENST00000463818 PNMA8BQ9ULN7 279 aaPredicted RBP19.03■□□□□ 0.64
SF3A1-205ENST00000463818 LAMA5O15230 3695 aa19.03■□□□□ 0.64
SF3A1-205ENST00000463818 TOR1BO14657 336 aa19.02■□□□□ 0.64
SF3A1-205ENST00000463818 RIOK3O14730 519 aaKnown RBP19.02■□□□□ 0.64
SF3A1-205ENST00000463818 GP1BAP07359 652 aa19.02■□□□□ 0.64
SF3A1-205ENST00000463818 HOXB3P14651 431 aaPredicted RBP19.02■□□□□ 0.64
SF3A1-205ENST00000463818 PTMSP20962 102 aa19.02■□□□□ 0.64
SF3A1-205ENST00000463818 ZNF135P52742 658 aaPredicted RBP19.02■□□□□ 0.64
SF3A1-205ENST00000463818 C1orf61Q13536 156 aa19.02■□□□□ 0.64
SF3A1-205ENST00000463818 LRRC14Q15048 493 aa19.02■□□□□ 0.64
SF3A1-205ENST00000463818 WSCD2Q2TBF2 565 aa19.02■□□□□ 0.64
SF3A1-205ENST00000463818 FIGNQ5HY92 759 aa19.02■□□□□ 0.64
SF3A1-205ENST00000463818 CFAP58Q5T655 872 aa19.02■□□□□ 0.64
SF3A1-205ENST00000463818 FAXCQ5TGI0 409 aa19.02■□□□□ 0.64
SF3A1-205ENST00000463818 CDCP2Q5VXM1 449 aa19.02■□□□□ 0.64
SF3A1-205ENST00000463818 ZCCHC8Q6NZY4 707 aaKnown RBP19.02■□□□□ 0.64
SF3A1-205ENST00000463818 ERAP2Q6P179 960 aa19.02■□□□□ 0.64
SF3A1-205ENST00000463818 BRAT1Q6PJG6 821 aa19.02■□□□□ 0.64
SF3A1-205ENST00000463818 ZSWIM9Q86XI8 627 aa19.02■□□□□ 0.64
SF3A1-205ENST00000463818 NPWQ8N729 165 aa19.02■□□□□ 0.64
SF3A1-205ENST00000463818 DCBLD2Q96PD2 775 aa19.02■□□□□ 0.64
SF3A1-205ENST00000463818 TUBGCP5Q96RT8 1024 aa19.02■□□□□ 0.64
SF3A1-205ENST00000463818 IL12RB2Q99665 862 aa19.02■□□□□ 0.64
SF3A1-205ENST00000463818 ABCG4Q9H172 646 aa19.02■□□□□ 0.64
SF3A1-205ENST00000463818 SP110Q9HB58 689 aa19.02■□□□□ 0.64
SF3A1-205ENST00000463818 SALL4Q9UJQ4 1053 aa19.02■□□□□ 0.64
SF3A1-205ENST00000463818 TDRD6O60522 2096 aaKnown RBP19.01■□□□□ 0.63
SF3A1-205ENST00000463818 CPED1A4D0V7 1026 aa19.01■□□□□ 0.63
SF3A1-205ENST00000463818 TPP1O14773 563 aa19.01■□□□□ 0.63
SF3A1-205ENST00000463818 TLX3O43711 291 aaPredicted RBP19.01■□□□□ 0.63
SF3A1-205ENST00000463818 GCATO75600 419 aa19.01■□□□□ 0.63
SF3A1-205ENST00000463818 PRKCGP05129 697 aa19.01■□□□□ 0.63
SF3A1-205ENST00000463818 IL1R2P27930 398 aa19.01■□□□□ 0.63
SF3A1-205ENST00000463818 PCK1P35558 622 aa19.01■□□□□ 0.63
SF3A1-205ENST00000463818 LIG3P49916 1009 aa19.01■□□□□ 0.63
SF3A1-205ENST00000463818 ADKP55263 362 aaKnown RBP19.01■□□□□ 0.63
SF3A1-205ENST00000463818 FANCCQ00597 558 aa19.01■□□□□ 0.63
SF3A1-205ENST00000463818 NSUN2Q08J23 767 aaKnown RBP eCLIP19.01■□□□□ 0.63
SF3A1-205ENST00000463818 IRF4Q15306 451 aa19.01■□□□□ 0.63
SF3A1-205ENST00000463818 BOLA3Q53S33 107 aa19.01■□□□□ 0.63
SF3A1-205ENST00000463818 PRRT3Q5FWE3 981 aa19.01■□□□□ 0.63
SF3A1-205ENST00000463818 HGSNATQ68CP4 663 aa19.01■□□□□ 0.63
SF3A1-205ENST00000463818 TP53INP2Q8IXH6 220 aa19.01■□□□□ 0.63
SF3A1-205ENST00000463818 PHACTR4Q8IZ21 702 aa19.01■□□□□ 0.63
SF3A1-205ENST00000463818 IFI44Q8TCB0 444 aa19.01■□□□□ 0.63
SF3A1-205ENST00000463818 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.01■□□□□ 0.63
SF3A1-205ENST00000463818 CINPQ9BW66 212 aaPredicted RBP19.01■□□□□ 0.63
SF3A1-205ENST00000463818 SLC13A1Q9BZW2 595 aa19.01■□□□□ 0.63
SF3A1-205ENST00000463818 ATP13A3Q9H7F0 1226 aa19.01■□□□□ 0.63
SF3A1-205ENST00000463818 APOBEC3BQ9UH17 382 aaKnown RBP19.01■□□□□ 0.63
SF3A1-205ENST00000463818 SYCE3A1L190 88 aa19■□□□□ 0.63
SF3A1-205ENST00000463818 TMEM110-MUSTN1A8MSY1 372 aa19■□□□□ 0.63
SF3A1-205ENST00000463818 LZTS3O60299 673 aaPredicted RBP19■□□□□ 0.63
SF3A1-205ENST00000463818 C6P13671 934 aa19■□□□□ 0.63
SF3A1-205ENST00000463818 SERPINA4P29622 427 aa19■□□□□ 0.63
SF3A1-205ENST00000463818 PEX5P50542 639 aa19■□□□□ 0.63
SF3A1-205ENST00000463818 PPARDQ03181 441 aa19■□□□□ 0.63
SF3A1-205ENST00000463818 IL10RBQ08334 325 aa19■□□□□ 0.63
SF3A1-205ENST00000463818 DPYSQ14117 519 aa19■□□□□ 0.63
SF3A1-205ENST00000463818 RFTN1Q14699 578 aaPredicted RBP19■□□□□ 0.63
SF3A1-205ENST00000463818 ACAP1Q15027 740 aa19■□□□□ 0.63
SF3A1-205ENST00000463818 CDKN3Q16667 212 aa19■□□□□ 0.63
SF3A1-205ENST00000463818 TDRD12Q587J7 1177 aaKnown RBP19■□□□□ 0.63
SF3A1-205ENST00000463818 MACC1Q6ZN28 852 aa19■□□□□ 0.63
SF3A1-205ENST00000463818 LUZP1Q86V48 1076 aa19■□□□□ 0.63
SF3A1-205ENST00000463818 LZTR1Q8N653 840 aa19■□□□□ 0.63
SF3A1-205ENST00000463818 MAPK15Q8TD08 544 aa19■□□□□ 0.63
SF3A1-205ENST00000463818 ZWILCHQ9H900 591 aa19■□□□□ 0.63
SF3A1-205ENST00000463818 NCKIPSDQ9NZQ3 722 aa19■□□□□ 0.63
SF3A1-205ENST00000463818 ATP8A1Q9Y2Q0 1164 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms