RNA–Protein interactions for RNA: ENST00000463503.5

SSR3-202, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 596 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-202ENST00000463503 PROSCO94903 275 aa11.34□□□□□ -0.59
SSR3-202ENST00000463503 LUC7L3O95232 432 aaKnown RBP11.34□□□□□ -0.59
SSR3-202ENST00000463503 GJB6O95452 261 aa11.34□□□□□ -0.59
SSR3-202ENST00000463503 PSMA2P25787 234 aa11.34□□□□□ -0.59
SSR3-202ENST00000463503 SULT1E1P49888 294 aa11.34□□□□□ -0.59
SSR3-202ENST00000463503 HDAC4P56524 1084 aa11.34□□□□□ -0.59
SSR3-202ENST00000463503 ZNF177Q13360 481 aaPredicted RBP11.34□□□□□ -0.59
SSR3-202ENST00000463503 CDH18Q13634 790 aa11.34□□□□□ -0.59
SSR3-202ENST00000463503 TGIF1Q15583 401 aa11.34□□□□□ -0.59
SSR3-202ENST00000463503 PERM1Q5SV97 790 aa11.34□□□□□ -0.59
SSR3-202ENST00000463503 PIP5KL1Q5T9C9 394 aa11.34□□□□□ -0.59
SSR3-202ENST00000463503 NUGGCQ68CJ6 796 aa11.34□□□□□ -0.59
SSR3-202ENST00000463503 ZCCHC8Q6NZY4 707 aaKnown RBP11.34□□□□□ -0.59
SSR3-202ENST00000463503 CRTC1Q6UUV9 634 aa11.34□□□□□ -0.59
SSR3-202ENST00000463503 SLFN11Q7Z7L1 901 aa11.34□□□□□ -0.59
SSR3-202ENST00000463503 PHLDB2Q86SQ0 1253 aa11.34□□□□□ -0.59
SSR3-202ENST00000463503 PSTKQ8IV42 348 aaKnown RBP11.34□□□□□ -0.59
SSR3-202ENST00000463503 UNC45BQ8IWX7 931 aa11.34□□□□□ -0.59
SSR3-202ENST00000463503 REXO1L1PQ8IX06 675 aa11.34□□□□□ -0.59
SSR3-202ENST00000463503 ARL14Q8N4G2 192 aa11.34□□□□□ -0.59
SSR3-202ENST00000463503 CARNMT1Q8N4J0 409 aa11.34□□□□□ -0.59
SSR3-202ENST00000463503 ZNF548Q8NEK5 533 aaPredicted RBP11.34□□□□□ -0.59
SSR3-202ENST00000463503 TPCN2Q8NHX9 752 aa11.34□□□□□ -0.59
SSR3-202ENST00000463503 WDR36Q8NI36 951 aaKnown RBP11.34□□□□□ -0.59
SSR3-202ENST00000463503 NTAN1Q96AB6 310 aa11.34□□□□□ -0.59
SSR3-202ENST00000463503 FCRL2Q96LA5 508 aaPredicted RBP11.34□□□□□ -0.59
SSR3-202ENST00000463503 TBCBQ99426 244 aa11.34□□□□□ -0.59
SSR3-202ENST00000463503 DUSP23Q9BVJ7 150 aa11.34□□□□□ -0.59
SSR3-202ENST00000463503 CALN1Q9BXU9 219 aa11.34□□□□□ -0.59
SSR3-202ENST00000463503 PREBQ9HCU5 417 aa11.34□□□□□ -0.59
SSR3-202ENST00000463503 ARHGEF38Q9NXL2 777 aa11.34□□□□□ -0.59
SSR3-202ENST00000463503 SALL4Q9UJQ4 1053 aa11.34□□□□□ -0.59
SSR3-202ENST00000463503 ACSL6Q9UKU0 697 aa11.34□□□□□ -0.59
SSR3-202ENST00000463503 ANKRD36A6QL64 1941 aa11.34□□□□□ -0.59
SSR3-202ENST00000463503 PRRC2CQ9Y520 2896 aaKnown RBP11.33□□□□□ -0.6
SSR3-202ENST00000463503 EME2A4GXA9 379 aaPredicted RBP11.33□□□□□ -0.6
SSR3-202ENST00000463503 KCNU1A8MYU2 1149 aa11.33□□□□□ -0.6
SSR3-202ENST00000463503 LRCH4O75427 683 aa11.33□□□□□ -0.6
SSR3-202ENST00000463503 CCR1P32246 355 aa11.33□□□□□ -0.6
SSR3-202ENST00000463503 SLC11A2P49281 568 aa11.33□□□□□ -0.6
SSR3-202ENST00000463503 NUMBP49757 651 aa11.33□□□□□ -0.6
SSR3-202ENST00000463503 TBX4P57082 545 aa11.33□□□□□ -0.6
SSR3-202ENST00000463503 PITX1P78337 314 aaPredicted RBP11.33□□□□□ -0.6
SSR3-202ENST00000463503 NRG1Q02297 640 aaPredicted RBP11.33□□□□□ -0.6
SSR3-202ENST00000463503 DEUP1Q05D60 604 aa11.33□□□□□ -0.6
SSR3-202ENST00000463503 ZNF284Q2VY69 593 aa11.33□□□□□ -0.6
SSR3-202ENST00000463503 ZNF542PQ5EBM4 170 aa11.33□□□□□ -0.6
SSR3-202ENST00000463503 FOXR1Q6PIV2 292 aa11.33□□□□□ -0.6
SSR3-202ENST00000463503 EFL1Q7Z2Z2 1120 aaKnown RBP11.33□□□□□ -0.6
SSR3-202ENST00000463503 ABI3BPQ7Z7G0 1075 aa11.33□□□□□ -0.6
SSR3-202ENST00000463503 CFAP52Q8N1V2 620 aa11.33□□□□□ -0.6
SSR3-202ENST00000463503 ARFGAP1Q8N6T3 406 aa11.33□□□□□ -0.6
SSR3-202ENST00000463503 KIAA1524Q8TCG1 905 aa11.33□□□□□ -0.6
SSR3-202ENST00000463503 FAM172AQ8WUF8 416 aa11.33□□□□□ -0.6
SSR3-202ENST00000463503 HTR3CQ8WXA8 447 aa11.33□□□□□ -0.6
SSR3-202ENST00000463503 IFT43Q96FT9 208 aa11.33□□□□□ -0.6
SSR3-202ENST00000463503 PSMG3-AS1Q96PY0 264 aa11.33□□□□□ -0.6
SSR3-202ENST00000463503 TRIM7Q9C029 511 aa11.33□□□□□ -0.6
SSR3-202ENST00000463503 EPN3Q9H201 632 aa11.33□□□□□ -0.6
SSR3-202ENST00000463503 FAM204AQ9H8W3 233 aa11.33□□□□□ -0.6
SSR3-202ENST00000463503 PIGVQ9NUD9 493 aa11.33□□□□□ -0.6
SSR3-202ENST00000463503 DDIT4Q9NX09 232 aa11.33□□□□□ -0.6
SSR3-202ENST00000463503 PYCARDQ9ULZ3 195 aa11.33□□□□□ -0.6
SSR3-202ENST00000463503 MAN2B2Q9Y2E5 1009 aa11.33□□□□□ -0.6
SSR3-202ENST00000463503 PCDHGA7Q9Y5G6 932 aa11.33□□□□□ -0.6
SSR3-202ENST00000463503 PCDHGA4Q9Y5G9 962 aa11.33□□□□□ -0.6
SSR3-202ENST00000463503 DUSP10Q9Y6W6 482 aa11.33□□□□□ -0.6
SSR3-202ENST00000463503 ZNF106Q9H2Y7 1883 aaKnown RBP11.32□□□□□ -0.6
SSR3-202ENST00000463503 CCDC187A0A096LP49 1063 aa11.32□□□□□ -0.6
SSR3-202ENST00000463503 FAM170AA1A519 330 aa11.32□□□□□ -0.6
SSR3-202ENST00000463503 NEMP2A6NFY4 417 aa11.32□□□□□ -0.6
SSR3-202ENST00000463503 SLC31A1O15431 190 aa11.32□□□□□ -0.6
SSR3-202ENST00000463503 BUB1BO60566 1050 aaPredicted RBP11.32□□□□□ -0.6
SSR3-202ENST00000463503 PPFIA2O75334 1257 aa11.32□□□□□ -0.6
SSR3-202ENST00000463503 NME1P15531 152 aaKnown RBP11.32□□□□□ -0.6
SSR3-202ENST00000463503 TFE3P19532 575 aaPredicted RBP11.32□□□□□ -0.6
SSR3-202ENST00000463503 WT1P19544 449 aaPredicted RBP11.32□□□□□ -0.6
SSR3-202ENST00000463503 SLC5A2P31639 672 aa11.32□□□□□ -0.6
SSR3-202ENST00000463503 NOP2P46087 812 aaKnown RBP11.32□□□□□ -0.6
SSR3-202ENST00000463503 ZNF135P52742 658 aaPredicted RBP11.32□□□□□ -0.6
SSR3-202ENST00000463503 CLDN2P57739 230 aa11.32□□□□□ -0.6
SSR3-202ENST00000463503 SERINC3Q13530 473 aa11.32□□□□□ -0.6
SSR3-202ENST00000463503 CLCA4Q14CN2 919 aa11.32□□□□□ -0.6
SSR3-202ENST00000463503 C15orf59Q2T9L4 293 aaPredicted RBP11.32□□□□□ -0.6
SSR3-202ENST00000463503 MS4A13Q5J8X5 152 aa11.32□□□□□ -0.6
SSR3-202ENST00000463503 LRRC38Q5VT99 294 aa11.32□□□□□ -0.6
SSR3-202ENST00000463503 USP53Q70EK8 1073 aa11.32□□□□□ -0.6
SSR3-202ENST00000463503 POLNQ7Z5Q5 900 aa11.32□□□□□ -0.6
SSR3-202ENST00000463503 SYCE1Q8N0S2 351 aa11.32□□□□□ -0.6
SSR3-202ENST00000463503 CCAR2Q8N163 923 aaKnown RBP11.32□□□□□ -0.6
SSR3-202ENST00000463503 ATP6V0D2Q8N8Y2 350 aa11.32□□□□□ -0.6
SSR3-202ENST00000463503 LRRC57Q8N9N7 239 aa11.32□□□□□ -0.6
SSR3-202ENST00000463503 TEKT4Q8WW24 435 aa11.32□□□□□ -0.6
SSR3-202ENST00000463503 KLK6Q92876 244 aa11.32□□□□□ -0.6
SSR3-202ENST00000463503 TRIM44Q96DX7 344 aaPredicted RBP11.32□□□□□ -0.6
SSR3-202ENST00000463503 LIN37Q96GY3 246 aaPredicted RBP11.32□□□□□ -0.6
SSR3-202ENST00000463503 BTN2A3PQ96KV6 586 aa11.32□□□□□ -0.6
SSR3-202ENST00000463503 C1orf74Q96LT6 269 aa11.32□□□□□ -0.6
SSR3-202ENST00000463503 HAPLN3Q96S86 360 aa11.32□□□□□ -0.6
SSR3-202ENST00000463503 ARHGAP9Q9BRR9 750 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms